¬ D. Hwang, W. A. Schmitt, G. Stephanopoulos and G.Stephanopoulos, “Determination of Minimun Sample Size and Discriminatory Expression Patterns in Microarray Data,” Bioinformatics, 18: 1184-1193 (2002).

¬ G. Stephanopoulos and W.A. Schmitt, "Systems biology: an emerging theme in biological research," Proceedings of ESCAPE 11 Int'l Conf., Copenhagen, May 27-30, 2001.

¬ G. Stephanopoulos, "Bioinformatics and Metabolic Engineering," Forward article of special issue on Bioinformatics, Metabolic Engineering, 2: 157-158 (2000).

¬ R. T. Kamimura, S. Bicciato, H. Shimizu, J. Alford and G. Stephanopoulos, “Mining of biological data I: Identifying discriminating features via mean hypothesis testing," Metabolic Engineering, 2: 218-227 (2000).

¬ R.T. Kamimura, S. Bicciato, H. Shimizu, J. Alford and G. Stephanopoulos, " Mining of biological data II: Assessing data structure and class homogeneity by cluster analysis," Metabolic Engineering, 2: 228-238 (2000).

¬ Maria I. Klapa and G. Stephanopoulos, "Metabolic Engineering: A framework for the integration of genomic and physiological data," in NMR in Biotechnology: Theory and Applications, pp. 453-477, Barbotin/Portais (eds.), Horizon Scientific Press, UK (2000).

¬ G. Stephanopoulos, "Emerging directions in computer applications to biotechnology: Upgrading the information content of biological data," Annual Reviews in Control, 23: 61-69, (1999).

¬ S. Bicciato, R. Kamimura, H. Shimizu, and G. Stephanopoulos, “Quantification of Data Clusters for Bioprocess Performance Classification via Artificial Intelligence,” Proceedings, IFAC Conf. Comp. Appl. to Biotech., Osaka, May 31-June 4, (1998).

¬ G. Stephanopoulos, G. Locher, M. J. Duff, R. Kamimura and Geo. Stephanopoulos,"Fermentation Database Mining by Pattern Recognition," Biotechnol. & Bioeng., 53: 443-452 (1997).

¬ R. Kamimura, K. Konstantinov and G. Stephanopoulos, “KBS, ANN and Pattern Recognition Applications in Fermentation Processes”, Current Opinion in Biotechnology, 7: 231-234 (1996).

¬ G. Stephanopoulos, G. Locher and M. Duff, “Pattern Recognition Methods for Fermentation Database Mining”, IFAC Proceedings, CAB6, Garmish, Germany (1996).

¬ B. Bakshi, G. Locher, G. Stephanopoulos, and Geo. Stephanopoulos, “Analysis of Data for Evaluation, Diagnosis and Control of Batch Operations,” J. of Process Control, 4, pp. 175-194 (1994).

¬ U. Saner and G. Stephanopoulos, "Application of Pattern Recognition Techniques to Fermentation Data Analysis," pp. 123-128 in Modeling and Control of Biotechnical Processes 1992, M.N. Karim and G. Stephanopoulos (eds.), IFAC Symposia Series No. 10, Pergamon Press, Oxford, (1992).

¬ L.L. Hsiao, F. Dangond, T. Yoshida, R. Hong, R.V. Jensen, J. Misra, P. Haverty, Z. Weng, G. Mutter, W. Dillon, K.F. Lee, K.E. Clark, P. Haverty, Z. Wang, G.I. Mutter, M.P. Frosch, N. M.E. McDonald, E.L. Milford, C. Crum, R. Bueno, R.E. Pratt, M. Mahadevappa, J.A. Warrington, Geo. Stephanopoulos, Greg. Stephanopoulos and S.R. Gullans, “A compendium of gene expression in normal human tissues reveals tissue-selective genes and distinct expression patterns of housekeeping genes,” Physiological Genomics, (in press), (2001).

¬ G. Stephanopoulos and J. Kelleher, “How to make a superior cell,” Science, 292: 2024-2026, (2001).

¬ R.T. Gill, S. Wildt and G. Stephanopoulos, "Genome-wide screening for trait-conferring genes using DNA microarrays," (in press) (2002).

¬ R.T. Gill, E. Katsoulakis, W. Schmitt, G. Taroncher-Oldenburg and G. Stephanopoulos, "Dynamic transcriptional profiling of the light to dark transition in Synechocystis sp. PCC6803," (in press) (2002).

¬ F. Dangond, D. Hwang, P. Pasinelli, M.P. Frosch, Greg Stephanopoulos, Geo. Stephanopoulos, R.H. Brown Jr., and S.R. Gullans, “The molecular signature of late-stage human ALS revealed by expression profiling of post-mortem spinal cord,” (submitted, PG-00087-2001), (2001).

¬ G. Stephanopoulos, D. Hwang, W. Schmitt, J. Misra and Geo. Stephanopoulos, "Mapping physiological states from microarray expression experiments," (submitted) (2001).

¬ D. Hwang, I. Alevizos, W.A. Schmitt, H. Ohyama, R. Todd, M. Mahadevappa, J. Warrington, D. Wong and G. Stephanopoulos, "Characterization of normal and cancerous oral epithelium using pattern recognition and classification analysis of microarray transcription data," (submitted) (2001).

¬ H. Shimizu, R.T. Kamimura, S. Bicciato, J. Alford and G. Stephanopoulos, “A fuzzy logic based approach for physiological state identification and performance recognition of industrial bioprocesses,” (submitted)(2001).

¬ J. Misra, W. Schmitt, D. Hwang, L.-L. Hsiao, G. Gullans, Geo. Stephanopoulos and Greg Stephanopoulos, "Interactive exploration of microarray gene expression patterns in a reduced dimensional space," (submitted) (2001).

¬ D. Hwang, W. A. Schmitt, G. Stephanopoulos and G.Stephanopoulos, “Determination of Minimun Sample Size and Discriminatory Expression Patterns in Microarray Data,” (submitted) (2001).

¬ K.S. Yanagimachi, D.E. Stafford, A.F. Dexter, A.J. Sinskey and G. Stephanopoulos, "Application of radiolabeled tracers to biocatalytic flux analysis," European J. Biochemistry, 278: 1450-1460 (2001).

¬ G. Stephanopoulos and W.A. Schmitt, "Systems biology: an emerging theme in biological research," Proceedings of ESCAPE 11 Int'l Conf., Copenhagen, May 27-30, 2001.