%graphing representative signals
load remap2pin2;
data=dataStruct.data(1);
data=data{:,:};
time=dataStruct.timeVec(1);
time=time{:,1};
plot(time(1:2000)/20000,data(1:2000,1));
xlabel('Time (s)');
ylabel('Voltage (mv)');
title('Electrode 1 Signal From Stimulation of Electrode 2','fontsize',12,'fontweight','bold');



%graphing comparison of filtered and unfiltered signalas
plot([1:length(temp)]'/20000,data(:,1)+.01,'b', [1:length(temp)]'/20000, temp,'g');
xlabel('Time (s)');
ylabel('Voltage (mv)');
title('Comparison of Filtered and Unfiltered Signals of Electrode 1 from Stimulation of Electrode 2','fontsize',12,'fontweight','bold');
legend('Unfiltered', 'Filtered');



%graphing power spectra
plot([1:5000]'*2, real(data_fft2(1:5000,1))+2,'b',[1:5000]'*2, real(data_fft(1:5000,1)),'g');
xlabel('Frequency (Hz)');
ylabel('Amplitude');
title('Fourier Decomposition of Electrode 1 Signal from Stimulation of Electrode 2','fontsize',12,'fontweight','bold');
legend('Unfiltered', 'Filtered');



%graphing filtered signal and spikes
plot([1:length(spikes)]'/20000, temp,'b', [1:length(spikes)]'/20000,spikes(:,2)*.003,'g');
xlabel('Time (s)');
ylabel('Voltage / Spike');
title('Comparison of Filtered Signal and Extracted Spikes for Electrode 2 from Stimulation of Electrode 2','fontsize',12,'fontweight','bold');
legend('Filtered Signal', 'Spikes');
        


%graphing filtered signal and thershold
x=1; y=length(temp);
plot([x:y]'/20000, temp(x:y,1),'b')
%line([x y]',[spikethresh spikethresh]','color','g')
xlabel('Time (s)');
ylabel('Voltage / Spike');
title('Comparison of Filtered Signal and Extracted Spikes for Electrode 2 from Stimulation of Electrode 2','fontsize',12,'fontweight','bold');
legend('Filtered Signal', 'Spike Threshold');