%filtered remap2 data to find template spikes
orgdata=[];
for i=1:length(dataStruct.data)
    temp=dataStruct.data(i);
    temp=temp{:,:};
    temp=temp(1001:end,:);
    orgdata=[orgdata;temp];
end
data=orgdata;

%finding template spikes
plot([1:length(data(:,i))]'/20000,data(:,60));
3.5*std(data(:,60))
xlabel('Time (s)');
ylabel('Voltage (mv)');
title('Spike Shape 6','fontsize',12,'fontweight','bold');

%graphing template spikes
plot([1:length(template_spike10)]'/20000,template_spike10);
xlabel('Time (s)');
ylabel('Voltage (mv)');
title('Spike Shape 10','fontsize',12,'fontweight','bold');
    
%constructing template_spike6
template_spike6=template_spike3(end:-1:1,1)

%constructing template_spike7
template_spike7=template_spike4(1:2,1);
for i=1:10
    template_spike7=[template_spike7; template_spike4(3,1)];
end
template_spike7=[template_spike7; template_spike4(4:end,1)];

%constructing template_spike8
template_spike8=template_spike1(1:5,1);
for i=1:10
    template_spike8=[template_spike8; template_spike1(6,1)];
end
template_spike8=[template_spike8; template_spike1(7:end,1)];

%constructing template_spike9;
template_spike9=template_spike5;
template_spike9(14:24,1)=0;

%constructing template_spike10;
template_spike10=template_spike9*-1;


%saving template spikes
template_spikes=cell(10,1);
template_spikes{1,1}=template_spike1;
template_spikes{2,1}=template_spike2;
template_spikes{3,1}=template_spike3;
template_spikes{4,1}=template_spike4;
template_spikes{5,1}=template_spike5;
template_spikes{6,1}=template_spike6;
template_spikes{7,1}=template_spike7;
template_spikes{8,1}=template_spike8;
template_spikes{9,1}=template_spike9;
template_spikes{10,1}=template_spike10;
save('template_spikes.mat','template_spikes');