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Characterization of methylmalonyl CoA mutase promoter

Katherine Lynch
Department of Biology,Massachusetts Institute of Technology, Cambridge, MA 02139

 
   
Non-Scientific Abstract

Amino acids are widely produced and used as food additives, animal feed supplements, cosmetics, and medicines. In many cases, bacteria are used to make these amino acids. Isoleucine is one amino acid that relies on bacteria for its production. In an effort to make the bacterial production of isoleucine more efficient, scientists are studying possible enzymes that have an effect on isoleucine production.One of these genes that has recently been suspected as being a part of the regulation of isoleucine is mmc. In our studies,we attempt to learn about the promoter of mmc, so that its effect on isoleucine production can be better determined.

Abstract

Corynebacterium glutamicum is used to produce amino acids such as isoleucine. Two different threonine dehydratases from Escherichia coli have been used to create an isoleucine overproducing strain.The less effective strain has been found to upregulate methylmalonyl CoA mutase (mmc) in late stationary phase. In this project we attempted to examine the transcriptional regulatory mechanism of mmc, as well as identify the necessary promoter sequence. PCR mutagenesis was used to create three promoter deletions, which were tested by using transcriptional fusions to a reporter gene. It was found that the necessary sequence of the mmc promoter begins somewhere between nucleotide 136 and 246, upstream of the translational start site of the mmc gene. GUS assays were completed on the mmc promoter fused to a promoterless reporter gene under many different conditions. These experiments showed that mmc is not transcriptionally regulated by threonine, (-ketobutyrate, 3- hydroxybutyrate, or vitamin B12 under the conditions tested. Isoleucine and 2-hydroxybutyrate appear to have some effect on the timing of mmc transcription.