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Elevated LOH rates in hypomethylated mouse embryonic fibroblasts

Alpana Waghmare
Department of Biology,Massachusetts Institute of Technology, Cambridge, MA 02139
Work conducted in the laboratory Prof. Rudolf Jaenisch,Whitehead Institute.

 
   
Non-Scientific Abstract

Understanding the molecular basis of cancer development has been a fundamental problem in biology for the past fifty years.Work in cancer research established a genetic basis for cancer development through mutations in key cell-cycle regulatory genes or in genes that help maintain genomic stability. Genomic stability and integrity help maintain functional copies of cell cycle regulatory genes, and thus reduced genomic stability can lead to accumulation of mutations and ultimately cancer. It has been suggested that DNA methylation, a process in which DNA is chemically modified through addition of methyl groups, plays a role in chromosome stability and therefore tumor formation.Abnormal DNA methylation patterns have been observed in tumor cells, often correlating with early stages of cancer. The following study investigates the role of reduced methylation levels ‹ hypomethylation ‹ in chromosome stability in a mouse embryonic fibroblast system.Results from this investigation suggest that hypomethylation causes chromosomal instability leading to loss of function in cell cycle regulatory genes.

Abstract

DNA hypomethylation is an epigenetic phenomenon that has been suggested to play a role in carcinogenesis.One of the proposed mechanisms through which this may occur is chromosomal instability caused by genome-wide hypomethylation. Destabilized genomes may be more susceptible to mutations and loss of heterozygosity (LOH) in regions containing tumor suppressor genes or other regulatory genes. The following study investigates the effects of hypomethylation on genomic instability by measuring LOH rates in mouse embryonic fibroblasts with hypomethylated genomes established through a hypomorphic allele.We report here that hypomethylated fibroblasts show an increased LOH rate compared to normally methylated fibroblasts. The major chromosomal event observed in hypomethylated fibroblasts was whole chromosome loss. Both these findings suggest a critical role for hypomethylation in promoting genomic instability and tumor development.