Keating Lab Resources
SYNZIPs – Synthetic heterodimeric coiled-coils
CLEVER V1.0
CLEVER(.zip) – Sequence based approximation of protein energies
CLEVER manual(.pdf) – user manual
AVID – Annotation Via Integration of Data
DrawCoil – a program for producing coiled-coil helical wheel diagrams
Dissertations
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•Scott Chen, “Design of Protein-Protein Interaction Specificity Using Computational Methods and Experimental Library Screening”, link
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•Aaron Reinke, “Determining Protein Interaction Specificity of Native and Designed bZIP Family Transcription Factors”, link
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•Nora Zizlsperger, “Investigation of coiled-coil interactions between proteins of the spindle pole body”, link
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•Emiko Fire, “Flexibility and specificity of the interaction of MCL-1 with BIM BH3”, link
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•Karl Gutwin, “Computational prediction of coiled-coil interaction structure specificity”, link
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•James Apgar, “Modeling the flexibility of alpha helices in protein interfaces : structure based design and prediction of helix-mediated protein-protein interactions”, link
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•Gevorg Grigoryan, “Computational approaches for the design and prediction of protein-protein interactions”, link
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•Christina Taylor, “Redesigning specificity in miniproteins”, link
