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The Phase II writing requirement for Biology majors is in effect
for students in the Class of 2004 (and previous classes). Students
in the Class of 2005 and subsequent classes are required to satisfy
the MIT
undergraduate communications requirement rather than Phase II,
by taking Communication Intensive (CI) subjects.
The purpose
of the Phase II writing requirement is to demonstrate professional
competence and scholarship in communicating research findings or
other scholarly material. The Biology Department expects that all
undergraduate majors will be able to write a manuscript suitable
for publication in a scientific journal. Such an undertaking requires
planning in terms of intellectual content, organization, and attention
to detail. Consequently, the Biology Department requires each undergraduate
to submit a Phase II paper following the same procedures that a
graduate student, postdoctoral fellow, and faculty member must follow
when submitting a research paper. The paper will be sent out for
review and a decision letter stating whether the paper is accepted
or rejected will be sent to the author. If the paper is rejected,
the letter will outline specific procedures for revision. An accepted
Phase II paper will be published in the MIT Biology
Undergraduate (BUG) Journal.
The Writing
Coordinators for the Biology Department are Prof. Vernon Ingram
(email: vingram@mit.edu) and
Prof. Paul Matsudaira (email matsudaira@wi.mit.edu).
Prof. Ingram is responsible for students whose last names begin
with A-L, Prof. Matsudaira for M-Z. See
the Biology Education Office for any further questions concerning Phase II.
DEADLINES
The dates below
are critical deadlines:
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Submission of paper:
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September 15, 2003
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Acceptance of paper:
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REG DAY, Spring term, February 2, 2004
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To avoid any
problems in a student's senior year, the Department of Biology's
policy is to have all students submit their phase II papers by the
start of their senior year. All students must have completed the
Phase II requirement before registration day in the term in which
they want to graduate. THE DEADLINE IS
ABSOLUTE AND NOT NEGOTIABLE.
Students
who have not met this deadline can graduate that term only by enrolling
in one of these writing courses: 21W.780,
21W.783,
21F.226,
or 21F.228
and receiving a grade of B or better in that subject.
This Writing
Guide contains Instructions to Authors
which describes the format under which the paper is submitted. Guidelines
to the General Institute Requirement are described at http://web.mit.edu/firstyear/academics/gir.shtml.

PROCEDURES
FOR SUBMITTING PHASE II PAPERS
Passing
Phase II is a two-step process.
Step
One: By September 15, 2003, the student submits the Phase II
paper (and one copy) with a formal letter of submission and a cover
sheet checklist to the Biology Education Office. In the letter
the
author should describe briefly the contents of the manuscript.
The instructor of the course or the UROP supervisor will sign
the cover
sheet to certify that he/she has worked with the student in preparing
the Phase II paper. The paper must have the signature of one
of the Writing Tutors.
The manuscript
will then be reviewed by a faculty reviewer. The reviewer will write
a critique of the paper, its strengths and weakness, the quality
of the writing and the technical content and recommend the disposition
of the paper. Papers will not be evaluated on the success of a research
project but instead on the conceptualization of the problem, the
planning of the experiments, the detailed description of results,
and the level of understanding and the quality of the interpretation
discussed in the discussion section. Based on these criteria, the
paper will be accepted or rejected. Acceptance for publication is
an automatic pass of the Phase II writing requirement.
Step
Two: Rejected papers will be revised according to the reviewers'
comments and resubmitted for publication. The revised manuscript
must be accepted by the Phase II deadline, Reg Day of the last
term.
Options
for completion:
Course 7 majors
may use a Project Lab or UROP paper.
Alternatively, a student may submit a review paper or a research
proposal. In some cases a paper for a Biology, Toxicology, or Bioengineering
subject may also satisfy the requirement. It is prudent to discuss
your paper with Prof. Matsudaira or Prof. Ingram, who must approve
the specific topic at the beginning of the project.
7.02
or chemistry laboratory reports are not suitable as a Phase II paper.
Papers written for non-MIT courses will not be accepted.

GRADING
A Phase II paper
is either accepted, conditionally accepted,
or rejected.
Accepted:
A passing paper meets all the requirements set by the Committee
on the Writing Requirement. It is virtually free of errors in syntax,
word choice, grammar, spelling and punctuation. The experiments
are described well and the figures and tables are professionally
produced.
Conditionally
accepted: In some cases a paper may be accepted with revisions.
This is a marginal pass condition in which the paper has minor problems
which should be easily corrected.
Rejected:These
papers indicate that a student is not adequately proficient in organization,
logic, word choice, grammar or punctuation. The papers lack a sound
organizational and logical structure, excessive numbers of errors
in syntax, word choice, grammar, spelling or punctuation. Students
whose manuscripts are rejected should seek assistance from their
faculty research supervisor, course instructor, faculty advisor,
the biology writing tutor, or the MIT
Writing and Communication Center.
TRANSFER
STUDENTS
Transfer students
who would like to substitute a course taken in another institute
for one of the writing courses offered at MIT should see Prof. James
Paradis (email: jparadis@mit.edu),
14E-303, 3-7894.
RESOURCES
The Biology
Department provides Writing Tutors to help students prepare their
papers for submission to the journal. For further information, contact
the Biology Education office, 68-120.
MIT provides
many resources for students who wish or need to improve their writing
skills. Chief among them are the Writing Program, the Writing
and Communication Center, and the English as a Second Language
Program. You are urged to visit program offices for more detailed
information. In addition, the Guide to the Writing Requirement is
on the Web at the Writing
Requirement Office site.
The Writing
Requirement is administered by the Writing
Requirement Office, located in 7-103. If you have any questions
on the Requirement, please call Madeline Brown, Assistant to the
Director of the Writing Requirement or the Director of the Writing
Requirement, Associate Dean Leslie C. Perelman, at (617) 253-3039.

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VERY
FREQUENTLY ASKED QUESTIONS
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I
want to graduate in June 2004. When should I submit
my paper?
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Your
paper should be submitted by September 15, 2003.
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When
must I pass Phase II?
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You
must pass by Reg Day of the term that you intend to
graduate. In some cases the Writing Coordinators will
grant an extension, but you must petition the Writing
Requirement Committee for a waiver.
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I
want to graduate in February. When must I pass Phase
II?
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The
deadline is Reg Day of Fall term.
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What's
the difference between the Phase II Requirement and
Project Lab credit?
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This
question is also asked by faculty. Phase II is
an Institute writing requirement that must be satisfied
by Reg Day. Project Lab
is a restricted elective for Course 7 majors that must
be satisfied by the last day of the final term.
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I
want to use my UROP report for Phase II. Will this be
acceptable?
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Yes,
make sure that you finish the report during the summer.
A later deadline can be negotiated, but only by prior
permission from the Writing Coordinator. Under no circumstances
will a senior be allowed to start a UROP in the fall
term with the intention of using the paper for the Phase
II deadline in the Spring Term.
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I
only have a couple of experiments to finish my project.
Can I submit my paper late?
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You
must discuss this option with the Writing Coordinator
before Reg Day of Fall Term.
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It's
March and I wanted to finish my UROP before I write
my paper. Can I still submit it?
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No,
take a writing course or see Dean Perelman. You are
at great risk of not graduating, especially after the
add-date deadline for the writing courses.
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I
want to take Project Lab in the Fall and use the report
for Phase II.
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This
option is permissible because the Writing Tutors work
with Project Lab students in the course. The risk is
that you don't have much time to revise your papers
in time for the Reg Day deadline.
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I
don't want to submit my paper to the BUG Journal.
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Not
an option. The mechanism for passing the Phase II requirement
is to have your paper go through a critical review process
and acceptance into the Journal. You have the option
of limiting access to your paper, however, to MIT eyes
only, or it can be available to the entire WWW.
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Can
I write my paper on Athena?
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Yes,
but you are responsible for converting your text, image,
and graphics files to MS Word.
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I
need help with writing. Who do I contact?
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Contact
the Biology Education Office by emailing undergradbio@mit.edu
and you will b e assigned a tutor.
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Are
there other ways of passing the Phase II Requirement?
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Yes,
you can enroll in a writing course
and pass with a grade of B or better.
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The
writing tutor read my paper and recommended that I take
a writing class. Can I still use my paper to pass the
Phase II requirement?
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You
can use the paper in the Writing Course, but the paper
won't be accepted for publication in the BUG Journal.
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