Transgene "CRE" Genotyping |
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| Reaction Mix: | ||||
| Qiagen (hotstar taq) | ||||
| 10X PCR Buffer | 2.5 µL | |||
| Q solution | 5 µL | |||
| dNTP | 2 µL | |||
| CRE primer mix | 1 µL | |||
| Beta 5* primer mix | 3 µL | |||
| Taq | 0.125 µL | |||
| DNA | 1.0 µL | |||
| H2O | 10.375 µL | |||
| (dissolve the DNA from 1 cm of dissected tail in 500µL of TE. (Use 1µL for reactions)) | ||||
| PCR Primers: | ||||
| CRE(F) | 5'-ACTATCCAGCAACATTTGGGCCAG-3' | |||
| CRE(R) | 5'-GATCCTGGCAATTTCGGCTATACG-3' | |||
| internal control | ||||
| *Beta5(F1) | 5'-CTACAGCATACCTGCTTCACTGTG-3' | |||
| *Beta5(R) | 5'-GCCTTTCTGTGGGTTCCA-3' | |||
| Primer mix | ||||
| STARTING WITH 100mM PRIMER STOCKS | ||||
| 8.4 µL Beta5 (F1) | 25 µL CRE(F) | |||
| 8.4 µL Beta5 (R) | 25 µL CRE(R) | |||
| 183.2 µL H2O | 150 µL H2O | |||
| PCR CONDITIONS (Use ANG1-SOF): | ||||
| 1. 95° C, | 5:00 | |||
| 2. 94° C, | 1:00 | |||
| 3. 55° C, | 2:00 | |||
| 4. 72° C, | 4:00 | |||
| 5. Goto 2, | x34 | |||
| 6. 72° C, | 15:00 | |||
| 7. END | ||||
| Expected Bands | ||||
| internal control B5: ~ 434 bp | ||||
| transgene Mutant: ~ 282 bp | ||||