| Cluster | MI0001: |
| YAL026C | DRS2 | 1 | 0 | P-type amino-phospholipids-ATPase |
| Cluster | MI0002: |
| YDR148C | KGD2 | 11 | 0 | 2-oxoglutarate dehydrogenase complex E2 component |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| Cluster | MI0003: |
| YLR240W | VPS34 | 1 | 0 | phosphatidylinositol 3-kinase |
| Cluster | MI0004: |
| YCL009C | ILV6 | 3 | 0 | acetolactate synthase, regulatory subunit |
| YMR108W | ILV2 | 0 | 0 | acetolactate synthase |
| Cluster | MI0005: |
| YGL032C | AGA2 | 1 | 0 | a-agglutinin binding subunit |
| YNR044W | AGA1 | 0 | 0 | a-agglutinin anchor subunit |
| Cluster | MI0006: |
| YBR126C | TPS1 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YDR074W | TPS2 | 6 | 3 | alpha,alpha-trehalose-phosphate synthase, 102 KD subunit |
| YML100W | TSL1 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 123 KD subunit |
| YMR261C | TPS3 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 115 KD subunit |
| Cluster | MI0007: |
| YPL074W | YTA6 | 1 | 0 | similarity to VPS4P and YER047C (Class III) |
| Cluster | MI0008: |
| YBL084C | CDC27 | 10 | 10 | subunit of anaphase-promoting complex (cyclosome) |
| YDL008W | APC11 | 10 | 10 | subunit of the anaphase promoting complex |
| YDR118W | APC4 | 10 | 10 | subunit of the anaphase promoting complex |
| YFR036W | CDC26 | 12 | 10 | subunit of anaphase-promoting complex (cyclosome) |
| YGL240W | DOC1 | 10 | 10 | component of the anaphase promoting complex |
| YHR166C | CDC23 | 15 | 10 | subunit of anaphase-promoting complex (cyclosome) |
| YKL022C | CDC16 | 10 | 10 | subunit of anaphase-promoting complex (cyclosome) |
| YLR102C | APC9 | 13 | 10 | subunit of the Anaphase Promoting Complex |
| YLR127C | APC2 | 12 | 10 | component of the anaphase promoting complex |
| YNL172W | APC1 | 10 | 10 | subunit of anaphase-promoting complex (cyclosome) |
| YOR249C | APC5 | 10 | 10 | component of the anaphase-promoting complex |
| Cluster | MI0009: |
| YER090W | TRP2 | 1 | 0 | anthranilate synthase component I |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| Cluster | MI0010: |
| YPL111W | CAR1 | 6 | 0 | arginase |
| Cluster | MI0011: |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YOR303W | CPA1 | 6 | 0 | arginine-specific carbamoylphosphate synthase, small chain |
| Cluster | MI0012: |
| YBR195C | MSI1 | 3 | 1 | chromatin assembly complex, subunit p50 |
| YDL077C | VAM6 | 2 | 1 | vacuolar carboxypeptidase Y |
| YDR080W | VPS41 | 1 | 1 | required for the vacuolar assembly |
| YHR060W | VMA22 | 10 | 1 | vacuolar ATPase assembly protein |
| YKL119C | VPH2 | 2 | 1 | H+-ATPase assembly protein |
| YML102W | CAC2 | 2 | 1 | chromatin assembly complex, subunit p60 |
| YPR018W | RLF2 | 3 | 2 | chromatin assembly complex, subunit p90 |
| Cluster | MI0013: |
| YKL190W | CNB1 | 2 | 0 | calcineurin B, regulatory subunit |
| YLR433C | CNA1 | 5 | 0 | calcineurin B, catalytic subunit |
| YML057W | CMP2 | 2 | 0 | calcineurin B, catalytic subunit |
| Cluster | MI0014: |
| YIL033C | BCY1 | 6 | 3 | cAMP dependent protein kinase, regulatory subunit |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| Cluster | MI0015: |
| YER123W | YCK3 | 1 | 0 | casein kinase, isoform 3 |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| Cluster | MI0016: |
| YDR256C | CTA1 | 4 | 0 | catalase A, peroxisomal |
| YGR088W | CTT1 | 1 | 0 | catalase T, cytosolic |
| Cluster | MI0017: |
| YLR288C | MEC3 | 82 | 1 | G2-specific checkpoint protein |
| YPL194W | DDC1 | 3 | 1 | DNA damage checkpoint protein |
| Cluster | MI0018: |
| YDL143W | CCT4 | 0 | 0 | component of chaperonin-containing T-complex |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL111W | CCT7 | 0 | 0 | component of chaperonin-containing T-complex |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL008C | CCT8 | 1 | 0 | component of chaperonin-containing T-complex |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| Cluster | MI0019: |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| Cluster | MI0020: |
| YAL040C | CLN3 | 7 | 1 | cyclin, G1/S-specific |
| YBR160W | CDC28 | 14 | 9 | cyclin-dependent protein kinase |
| YCR081W | SRB8 | 1 | 0 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit |
| YDL155W | CLB3 | 5 | 1 | cyclin, G2/M-specific |
| YDL127W | PCL2 | 5 | 1 | cyclin, G1/S-specific |
| YDL108W | KIN28 | 5 | 2 | cyclin-dependent ser/thr protein kinase |
| YDR443C | SSN2 | 0 | 0 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit |
| YGL134W | PCL10 | 2 | 2 | cyclin like protein interacting with PHO85P |
| YGR108W | CLB1 | 3 | 1 | cyclin, G2/M-specific |
| YGR109C | CLB6 | 1 | 1 | cyclin, B-type |
| YJL006C | CTK2 | 2 | 2 | carboxy-terminal domain (CTD) kinase, beta subunit |
| YKL139W | CTK1 | 2 | 2 | carboxy-terminal domain (CTD) kinase, alpha subunit |
| YLR210W | CLB4 | 4 | 1 | cyclin, G2/M-specific |
| YML112W | CTK3 | 3 | 2 | carboxy-terminal domain (CTD) kinase, gamma subunit |
| YMR199W | CLN1 | 5 | 1 | cyclin, G1/S-specific |
| YNL289W | PCL1 | 1 | 1 | cyclin, G1/S-specific |
| YNL025C | SSN8 | 5 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog |
| YOL001W | PHO80 | 1 | 1 | cyclin |
| YPL256C | CLN2 | 3 | 1 | cyclin, G1/S-specific |
| YPL219W | PCL8 | 2 | 1 | cyclin like protein interacting with PHO85P |
| YPL042C | SSN3 | 1 | 1 | cyclin-dependent CTD kinase |
| YPL031C | PHO85 | 14 | 5 | cyclin-dependent protein kinase |
| YPR025C | CCL1 | 4 | 1 | TFIIH subunit (transcription initiation factor), cyclin C component |
| YPR119W | CLB2 | 12 | 1 | cyclin, G2/M-specific |
| YPR120C | CLB5 | 3 | 1 | cyclin, B-type |
| Cluster | MI0021: |
| YAL029C | MYO4 | 1 | 1 | myosin heavy chain, unconventional (class V) isoform |
| YBL078C | AUT7 | 4 | 1 | essential for autophagy |
| YBL063W | KIP1 | 1 | 0 | kinesin-related protein |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YBL007C | SLA1 | 2 | 1 | cytoskeleton assembly control protein |
| YBR172C | SMY2 | 2 | 0 | kinesin-related protein |
| YBR200W | BEM1 | 10 | 2 | bud emergence mediator |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YCL040W | GLK1 | 6 | 1 | aldohexose specific glucokinase |
| YCL029C | BIK1 | 3 | 3 | nuclear fusion protein |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YCR088W | ABP1 | 4 | 3 | actin-binding protein |
| YDL225W | SHS1 | 5 | 4 | septin |
| YDL178W | AIP2 | 2 | 2 | actin interacting protein 2 |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR129C | SAC6 | 1 | 1 | actin filament bundling protein, fimbrin |
| YDR218C | SPR28 | 2 | 2 | septin-related sporulation protein |
| YDR388W | RVS167 | 9 | 3 | reduced viability upon starvation protein |
| YDR424C | DYN2 | 0 | 0 | dynein light chain 1, cytosolic |
| YDR488C | PAC11 | 2 | 1 | required in the absence of CIN8P |
| YEL061C | CIN8 | 2 | 0 | kinesin-related protein |
| YER016W | BIM1 | 4 | 3 | binding to microtubules |
| YFL039C | ACT1 | 22 | 17 | actin |
| YFL037W | TUB2 | 4 | 3 | beta-tubulin |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| YGL005C | 2 | 0 | weak similarity to Xenopus kinesin-related protein Eg5 (Class III) |
| YGR059W | SPR3 | 1 | 1 | sporulation-specific septin |
| YGR080W | TWF1 | 2 | 1 | twinfilin, an actin monomer sequestering protein |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YHR107C | CDC12 | 9 | 5 | septin |
| YHR129C | ARP1 | 6 | 2 | centractin |
| YHR156C | 3 | 0 | weak similarity to mouse kinesin KIF3B (Class III) |
| YHR179W | OYE2 | 2 | 1 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YIL138C | TPM2 | 1 | 1 | tropomyosin, isoform 2 |
| YIL034C | CAP2 | 16 | 1 | F-actin capping protein, beta subunit |
| YIR006C | PAN1 | 8 | 0 | actin-cytoskeleton assembly protein |
| YJL042W | MHP1 | 2 | 0 | microtubule-associated protein |
| YJR076C | CDC11 | 6 | 5 | septin |
| YKL129C | MYO3 | 0 | 0 | myosin type I |
| YKL079W | SMY1 | 2 | 0 | kinesin-related protein |
| YKL007W | CAP1 | 2 | 0 | F-actin capping protein alpha subunit |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YLL050C | COF1 | 3 | 1 | cofilin, actin binding and severing protein |
| YLR045C | STU2 | 3 | 1 | suppressor of a cs tubulin mutation |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YLR212C | TUB4 | 7 | 1 | gamma tubulin |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| YLR319C | BUD6 | 9 | 1 | bud site selection protein |
| YLR337C | VRP1 | 1 | 1 | verprolin |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| YML124C | TUB3 | 1 | 1 | alpha-3 tubulin |
| YML104C | MDM1 | 2 | 0 | intermediate filament protein |
| YML085C | TUB1 | 5 | 4 | alpha-1 tubulin |
| YMR092C | AIP1 | 4 | 1 | actin cytoskeleton component |
| YMR109W | MYO5 | 1 | 0 | myosin I |
| YMR138W | CIN4 | 3 | 0 | GTP-binding protein |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YNL243W | SLA2 | 2 | 0 | cytoskeleton assembly control protein |
| YNL223W | AUT2 | 3 | 3 | essential for autophagy |
| YNL138W | SRV2 | 3 | 2 | adenylate cyclase-associated protein, 70kDa |
| YNL126W | SPC98 | 5 | 1 | spindle pole body component |
| YNL079C | TPM1 | 0 | 0 | tropomyosin 1 |
| YOR058C | ASE1 | 0 | 0 | microtubule-associated protein (nonmotor) |
| YOR122C | PFY1 | 4 | 1 | profilin |
| YOR181W | LAS17 | 6 | 4 | component of actin cortical patches |
| YOR265W | RBL2 | 3 | 1 | beta-tubulin binding protein |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| YPL241C | CIN2 | 2 | 1 | involved in chromosome segregation |
| YPL174C | NIP100 | 8 | 3 | component of the dynactin complex |
| YPL155C | KIP2 | 1 | 0 | kinesin-related protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0022: |
| YBR149W | ARA1 | 2 | 0 | D-arabinose dehydrogenase, large subunit |
| Cluster | MI0023: |
| YLR284C | ECI1 | 5 | 0 | delta3-cis-delta2-trans-enoyl-CoA isomerase |
| Cluster | MI0024: |
| YJR045C | SSC1 | 4 | 0 | mitochondrial heat shock protein 70-related protein |
| Cluster | MI0025: |
| YDR166C | SEC5 | 1 | 0 | required for exocytosis |
| YER008C | SEC3 | 0 | 0 | component of exocyst complex |
| YGL233W | SEC15 | 1 | 1 | vesicular traffic control protein |
| YIL068C | SEC6 | 1 | 0 | protein transport protein |
| YJL085W | EXO70 | 0 | 0 | 70 kDa exocyst component protein |
| YLR166C | SEC10 | 5 | 2 | required for exocytosis |
| YPR055W | SEC8 | 1 | 1 | protein transport protein |
| Cluster | MI0026: |
| YKL182W | FAS1 | 0 | 0 | fatty-acyl-CoA synthase, beta chain |
| YPL231W | FAS2 | 0 | 0 | fatty-acyl-CoA synthase, alpha chain |
| Cluster | MI0027: |
| YOR221C | MCT1 | 1 | 0 | malonyl-CoA:ACP transferase |
| Cluster | MI0028: |
| YPL262W | FUM1 | 0 | 0 | fumarate hydratase |
| Cluster | MI0029: |
| YEL003W | GIM4 | 5 | 4 | Gim complex component |
| YGR078C | PAC10 | 5 | 4 | GIM4 - Gim complex component |
| YLR200W | YKE2 | 10 | 4 | Gim complex component |
| YML094W | GIM5 | 5 | 4 | Gim complex component |
| YNL153C | GIM3 | 6 | 4 | Gim complex component |
| Cluster | MI0030: |
| YDL090C | RAM1 | 1 | 1 | protein farnesyltransferase, beta subunit |
| YGL155W | CDC43 | 1 | 1 | geranylgeranyltransferase beta subunit |
| YJL031C | BET4 | 2 | 1 | geranylgeranyl transferase, alpha chain |
| YKL019W | RAM2 | 3 | 2 | protein farnesyltransferase, alpha subunit |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| YPR176C | BET2 | 1 | 1 | geranylgeranyltransferase type II beta subunit |
| Cluster | MI0031: |
| YCR034W | FEN1 | 1 | 0 | fatty acid elongase required for sphingolipid formation |
| YGR032W | GSC2 | 0 | 0 | 1,3-beta-D-glucan synthase subunit |
| YGR143W | SKN1 | 0 | 0 | glucan synthase subunit |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| Cluster | MI0032: |
| YAL044C | GCV3 | 0 | 0 | glycine decarboxylase, subunit H |
| YDR019C | GCV1 | 0 | 0 | glycine decarboxylase, subunit T |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YMR189W | GCV2 | 0 | 0 | glycine decarboxylase P subunit |
| Cluster | MI0033: |
| YCR024C-A | PMP1 | 0 | 0 | H+-ATPase subunit, plasma membrane |
| YEL017C-A | PMP2 | 0 | 0 | H+-ATPase subunit, plasma membrane |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YPL036W | PMA2 | 2 | 0 | H+-transporting P-type ATPase, minor isoform, plasma membrane |
| Cluster | MI0034: |
| YBR127C | VMA2 | 1 | 0 | H+-ATPase V1 domain 60 KD subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| 0 | 0 |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YEL027W | CUP5 | 0 | 0 | H+-ATPase V0 domain 17 KD subunit, vacuolar |
| YGR020C | VMA7 | 3 | 0 | H+-ATPase V1 domain 14 kDa subunit, vacuolar |
| YHR026W | PPA1 | 3 | 0 | H+-ATPase 23 KD subunit, vacuolar |
| YHR039C-A | VMA10 | 1 | 0 | H+-transporting ATPase V0 domain 13 KD subunit, vacuolar |
| YKL080W | VMA5 | 1 | 0 | H+-ATPase V1 domain 42 KD subunit, vacuolar |
| YLR447C | VMA6 | 88 | 1 | H+-ATPase V0 domain 36 KD subunit, vacuolar |
| YMR054W | STV1 | 2 | 0 | H+-ATPase V0 domain 102 KD subunit, not vacuolar |
| YOR270C | VPH1 | 2 | 0 | H+-ATPase V0 domain 95K subunit, vacuolar |
| YOR332W | VMA4 | 1 | 1 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YPL234C | TFP3 | 1 | 0 | H+-ATPase V0 domain 17 KD subunit, vacuolar |
| YPR036W | VMA13 | 0 | 0 | H+-ATPase V1 domain 54 KD subunit, vacuolar |
| Cluster | MI0035: |
| YGL253W | HXK2 | 0 | 0 | hexokinase II |
| Cluster | MI0036: |
| YBR081C | SPT7 | 13 | 13 | involved in alteration of transcription start site selection |
| YBR198C | TAF90 | 16 | 13 | TFIID and SAGA subunit |
| YDR145W | TAF61 | 14 | 13 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 13 | TFIID and SAGA subunit |
| YDR176W | NGG1 | 23 | 13 | general transcriptional adaptor or co-activator |
| YDR392W | SPT3 | 14 | 13 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 13 | general transcriptional adaptor or co-activator |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YGL112C | TAF60 | 19 | 13 | TFIID and SAGA subunit |
| YGR252W | GCN5 | 16 | 13 | histone acetyltransferase |
| YHR099W | TRA1 | 15 | 13 | component of the Ada-Spt transcriptional regulatory complex |
| YLR055C | SPT8 | 13 | 13 | transcriptional adaptor or co-activator |
| YMR236W | TAF17 | 20 | 13 | TFIID and SAGA subunit |
| YOL148C | SPT20 | 15 | 13 | member of the TBP class of SPT proteins that alter transcription site selection |
| YOR244W | ESA1 | 2 | 0 | histone acetyltransferase |
| YPL254W | HFI1 | 13 | 13 | transcriptional coactivator |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | MI0037: |
| YMR263W | SAP30 | 5 | 1 | subunit of the histone deacetylase B complex |
| YNL330C | RPD3 | 4 | 2 | histone deacetylase B |
| YNL021W | HDA1 | 3 | 0 | histone deacetylase A |
| YOL004W | SIN3 | 8 | 1 | transcription regulatory protein |
| Cluster | MI0038: |
| YNL037C | IDH1 | 2 | 1 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YOR136W | IDH2 | 5 | 1 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| Cluster | MI0039: |
| YER065C | ICL1 | 1 | 0 | isocitrate lyase |
| Cluster | MI0040: |
| YAL042W | ERV46 | 2 | 0 | component of copii vesicles involved in transport between the ER and golgi complex |
| YAL030W | SNC1 | 4 | 3 | synaptic vesicle-associated membrane protein |
| YAL007C | ERP2 | 0 | 0 | p24 protein involved in membrane trafficking |
| YAR002C-A | ERP1 | 1 | 0 | p24 protein involved in membrane trafficking |
| YBL078C | AUT7 | 4 | 1 | essential for autophagy |
| YBL050W | SEC17 | 11 | 9 | transport vesicle fusion protein |
| YBL037W | APL3 | 0 | 0 | AP-2 complex subunit, alpha-adaptin, 113 KD |
| YBR080C | SEC18 | 1 | 1 | vesicular-fusion protein, functional homolog of NSF |
| YBR097W | VPS15 | 1 | 0 | ser/thr protein kinase |
| YBR254C | TRS20 | 11 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YBR288C | APM3 | 2 | 1 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YDL195W | SEC31 | 4 | 4 | component of the COPII coat of ER-golgi vesicles |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YDR108W | GSG1 | 10 | 8 | sporulation specific protein |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YDR246W | TRS23 | 9 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR407C | TRS120 | 9 | 9 | TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR468C | TLG1 | 7 | 4 | member of the syntaxin family of t-SNAREs |
| YDR472W | TRS31 | 9 | 9 | TRAPP subunit of 31 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR498C | SEC20 | 3 | 2 | secretory pathway protein |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YGL212W | VAM7 | 15 | 1 | vacuolar morphogenesis protein |
| YGL206C | CHC1 | 3 | 1 | clathrin heavy chain |
| YGL200C | EMP24 | 4 | 4 | component of the COPII-coated vesicles, 24 kDa |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YGR166W | KRE11 | 10 | 8 | beta-glucan synthesis-associated protein |
| YGR167W | CLC1 | 5 | 1 | clathrin light chain |
| YGR261C | APL6 | 1 | 1 | AP-3 complex subunit, beta3-adaptin, 91 KD |
| YHL031C | GOS1 | 4 | 3 | SNARE protein of Golgi compartment |
| YHL019C | APM2 | 4 | 2 | involved in clathrin-independent transport processes |
| YHR012W | VPS29 | 2 | 1 | involved in vacuolar protein sorting |
| YIL109C | SEC24 | 7 | 5 | component of COPII coat of ER-Golgi vesicles |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YIL004C | BET1 | 4 | 2 | protein transport protein |
| YJL154C | VPS35 | 5 | 4 | protein-sorting protein, vacuolar |
| YJL053W | PEP8 | 4 | 1 | vacuolar protein sorting/targeting protein |
| YJL024C | APS3 | 1 | 1 | AP-3 complex subunit, sigma3 subunit, 22 KD |
| YJR005W | APL1 | 3 | 0 | AP-2 complex subunit, beta2-adaptin, 78 KD |
| YJR058C | APS2 | 2 | 0 | AP-2 complex subunit, sigma2 subunit, 17 KD |
| YJR065C | ARP3 | 6 | 5 | actin related protein |
| YKL196C | YKT6 | 4 | 3 | SNARE protein for Endoplasmic Reticulum-Golgi transport |
| YKL135C | APL2 | 7 | 3 | AP-1 complex subunit, beta1-adaptin, 82 KD |
| YKL041W | VPS24 | 1 | 1 | endosomal Vps protein complex subunit |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YKR068C | BET3 | 9 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YLR025W | SNF7 | 7 | 2 | class E Vps protein |
| YLR026C | SED5 | 8 | 4 | syntaxin (T-SNARE) |
| YLR078C | BOS1 | 6 | 1 | secretory pathway protein |
| YLR093C | NYV1 | 2 | 2 | v-SNARE, vacuolar |
| YLR148W | PEP3 | 3 | 3 | vacuolar membrane protein |
| YLR170C | APS1 | 1 | 1 | AP-1 complex subunit, sigma1 subunit, 18 KD |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YLR268W | SEC22 | 10 | 7 | synaptobrevin (V-SNARE) |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| YLR396C | VPS33 | 4 | 4 | vacuolar sorting protein |
| YML077W | BET5 | 10 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YML012W | ERV25 | 2 | 1 | component of the COPII-coated vesicles, 25 Kda |
| YMR183C | SSO2 | 1 | 0 | syntaxin (T-SNARE) |
| YMR197C | VTI1 | 8 | 7 | v-SNARE: involved in Golgi retrograde protein traffic |
| YMR218C | TRS130 | 9 | 9 | TRAPP subunit of 130 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YMR231W | PEP5 | 4 | 3 | vacuolar biogenesis protein |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YNL223W | AUT2 | 3 | 1 | essential for autophagy |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YOL062C | APM4 | 1 | 0 | AP-2 complex subunit, mu2 subunit, 55 KD |
| YOL018C | TLG2 | 10 | 4 | member of the syntaxin family of t-SNAREs |
| YOR036W | PEP12 | 11 | 2 | syntaxin (T-SNARE), vacuolar |
| YOR069W | VPS5 | 3 | 2 | involved in Golgi retention and vacuolar sorting |
| YOR075W | UFE1 | 5 | 2 | syntaxin (T-SNARE) of the ER |
| YOR106W | VAM3 | 5 | 5 | syntaxin (t-SNARE) |
| YOR115C | TRS33 | 10 | 9 | TRAPP subunit of 33 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YOR132W | VPS17 | 2 | 2 | vacuolar protein sorting-associated protein |
| YOR327C | SNC2 | 6 | 1 | synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles |
| YPL259C | APM1 | 2 | 1 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YPL232W | SSO1 | 2 | 1 | syntaxin-related protein |
| YPL218W | SAR1 | 4 | 2 | GTP-binding protein of the ARF family |
| YPL195W | APL5 | 1 | 1 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| YPL085W | SEC16 | 3 | 2 | multidomain vesicle coat protein |
| YPL045W | VPS16 | 3 | 3 | vacuolar sorting protein |
| YPL010W | RET3 | 0 | 0 | coatomer complex zeta chain |
| YPR029C | APL4 | 5 | 3 | AP-1 complex subunit, gamma-adaptin, 94 KD |
| YPR173C | VPS4 | 4 | 1 | vacuolar sorting protein |
| YPR181C | SEC23 | 9 | 6 | component of COPII coat of ER-golgi vesicles |
| Cluster | MI0041: |
| YGR238C | KEL2 | 2 | 1 | involved in cell fusion and morphogenesis |
| YHR158C | KEL1 | 5 | 1 | involved in cell fusion and morphology |
| Cluster | MI0042: |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YGR140W | CBF2 | 2 | 1 | kinetochore protein complex CBF3, 110 KD subunit |
| YJR060W | CBF1 | 2 | 0 | kinetochore protein |
| YJR089W | BIR1 | 3 | 2 | member of the inhibitor of apoptosis family, participate in chromosome segregation events |
| YKL089W | MIF2 | 0 | 0 | required for normal chromosome segregation and spindle integrity |
| YKL049C | CSE4 | 0 | 0 | component of the core centromere |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YMR094W | CTF13 | 4 | 1 | kinetochore protein complex, CBF3, 58 KD subunit |
| YMR168C | CEP3 | 1 | 0 | kinetochore protein complex, 71 KD subunit |
| Cluster | MI0043: |
| YBR115C | LYS2 | 0 | 0 | L-aminoadipate-semialdehyde dehydrogenase, large subunit |
| YGL154C | LYS5 | 3 | 0 | L-aminoadipate-semialdehyde dehydrogenase, small subunit |
| Cluster | MI0044: |
| YBR091C | MRS5 | 2 | 0 | subunit of the TIM22-complex |
| YDL217C | TIM22 | 5 | 2 | subunit of the TIM22-complex |
| YEL020W-A | TIM9 | 1 | 1 | essential subunit of the TIM22-complex for mitochondrial protein import |
| YGR082W | TOM20 | 7 | 4 | mitochondrial outer membrane import receptor subunit, 20 kD |
| YHR005C-A | MRS11 | 3 | 2 | subunit of the TIM22-complex |
| YHR117W | TOM71 | 1 | 0 | protein with similarity to TOM70P/Mas70p |
| YIL022W | TIM44 | 5 | 2 | mitochondrial inner membrane import receptor subunit |
| YJL143W | TIM17 | 3 | 2 | mitochondrial inner membrane import translocase subunit |
| YJL054W | TIM54 | 4 | 1 | translocase for the insertion of proteins into the mitochondrial inner membrane |
| YJR045C | SSC1 | 4 | 2 | mitochondrial heat shock protein 70-related protein |
| YMR060C | TOM37 | 1 | 1 | mitochondrial outer membrane import receptor subunit, 37 kD |
| YMR203W | TOM40 | 8 | 6 | forms the hydrophilic channel of the mitochondrial import pore for preproteins |
| YNL131W | TOM22 | 4 | 3 | mitochondrial outer membrane import receptor complex subunit |
| YNL121C | TOM70 | 5 | 4 | mitochondrial outer membrane specialized import receptor |
| YNL070W | TOM7 | 7 | 4 | mitochondrial outer membrane import receptor subunit, 7 kD |
| YNR017W | MAS6 | 3 | 2 | mitochondrial inner membrane import translocase subunit |
| YOR045W | TOM6 | 3 | 1 | mitochondrial outer membrane import receptor subunit, 6 kD |
| YPR133W-A | TOM5 | 1 | 1 | mitochondrial outer membrane protein |
| Cluster | MI0045: |
| YAL009W | SPO7 | 1 | 1 | meiotic protein |
| YHR004C | NEM1 | 2 | 1 | required for nuclear morphology |
| Cluster | MI0046: |
| YGR072W | UPF3 | 4 | 1 | nonsense-mediated mRNA decay protein |
| YHR077C | NMD2 | 3 | 2 | nonsense-mediated mRNA decay protein 2 |
| YMR080C | NAM7 | 9 | 1 | nonsense-mediated mRNA decay protein |
| Cluster | MI0047: |
| YBL079W | NUP170 | 1 | 1 | nuclear pore protein |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YDL116W | NUP84 | 19 | 2 | nuclear pore protein |
| YDR192C | NUP42 | 9 | 1 | nuclear pore protein |
| YER105C | NUP157 | 4 | 0 | nuclear pore protein |
| YER107C | GLE2 | 6 | 2 | required for nuclear pore complex structure and function |
| YFR002W | NIC96 | 7 | 4 | nuclear pore protein |
| YGL172W | NUP49 | 9 | 3 | nuclear pore protein |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YGL092W | NUP145 | 10 | 3 | nuclear pore protein |
| YGR119C | NUP57 | 22 | 3 | nuclear pore protein |
| YIL115C | NUP159 | 4 | 0 | nuclear pore protein |
| YJL061W | NUP82 | 6 | 2 | nuclear pore protein |
| YJL041W | NSP1 | 7 | 4 | nuclear pore protein |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YKL068W | NUP100 | 8 | 1 | nuclear pore protein |
| YKL057C | NUP120 | 6 | 1 | nuclear pore protein |
| YKR082W | NUP133 | 1 | 1 | nuclear pore protein |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YLR335W | NUP2 | 6 | 0 | nuclear pore protein |
| YML103C | NUP188 | 2 | 2 | nuclear pore protein |
| YMR047C | NUP116 | 127 | 3 | nuclear pore protein |
| YMR129W | POM152 | 3 | 1 | nuclear pore membrane glycoprotein |
| YOR098C | NUP1 | 8 | 1 | nuclear pore protein |
| Cluster | MI0048: |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YBR009C | HHF1 | 3 | 2 | histone H4 |
| YBR010W | HHT1 | 3 | 2 | histone H3 |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YNL031C | HHT2 | 3 | 2 | histone H3 |
| YNL030W | HHF2 | 3 | 2 | histone H4 |
| Cluster | MI0049: |
| YJL088W | ARG3 | 1 | 0 | ornithine carbamoyltransferase |
| Cluster | MI0050: |
| YFL022C | FRS2 | 2 | 0 | phenylalanine--tRNA ligase beta chain, cytosolic |
| YLR060W | FRS1 | 0 | 0 | phenylalanyl-tRNA synthetase, alpha subunit, cytosolic |
| YPR047W | MSF1 | 2 | 0 | phenylalanine--tRNA ligase alpha chain, mitochondrial |
| Cluster | MI0051: |
| YGR240C | PFK1 | 3 | 1 | 6-phosphofructokinase, alpha subunit |
| YMR205C | PFK2 | 1 | 1 | 6-phosphofructokinase, beta subunit |
| Cluster | MI0052: |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YER017C | AFG3 | 2 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YHR024C | MAS2 | 0 | 0 | processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial |
| YLR163C | MAS1 | 0 | 0 | mitochondrial processing peptidase |
| YMR035W | IMP2 | 1 | 0 | mitochondrial inner membrane protease subunit |
| YMR089C | YTA12 | 1 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YMR150C | IMP1 | 0 | 0 | protease, mitochondrial |
| YPR024W | YME1 | 0 | 0 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| Cluster | MI0053: |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YBR173C | UMP1 | 1 | 0 | proteasome maturation factor |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL020C | RPN4 | 0 | 0 | 26S proteasome subunit |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR069C | DOA4 | 2 | 0 | ubiquitin-specific protease |
| YDR394W | RPT3 | 7 | 3 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YER094C | PUP3 | 2 | 1 | 20S proteasome subunit (beta3) |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 1 | 26S proteasome regulatory subunit |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YGR232W | NAS6 | 3 | 1 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YGR253C | PUP2 | 2 | 0 | 20S proteasome subunit(alpha5) |
| YGR270W | YTA7 | 0 | 0 | 26S proteasome subunit |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| YIL075C | RPN2 | 1 | 0 | 26S proteasome regulatory subunit |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YOR157C | PUP1 | 4 | 1 | 20S proteasome subunit (beta2) |
| YOR259C | RPT4 | 3 | 3 | 26S proteasome regulatory subunit |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| Cluster | MI0054: |
| YDL040C | NAT1 | 0 | 0 | protein N-acetyltransferase subunit |
| YHR013C | ARD1 | 0 | 0 | protein N-acetyltransferase subunit |
| Cluster | MI0055: |
| YAL038W | CDC19 | 2 | 0 | pyruvate kinase |
| YOR347C | PYK2 | 0 | 0 | pyruvate kinase, glucose-repressed isoform |
| Cluster | MI0056: |
| YBR221C | PDB1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) beta chain precursor |
| YER178W | PDA1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) alpha chain precursor |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YGR193C | PDX1 | 1 | 0 | pyruvate dehydrogenase complex protein X |
| YNL071W | LAT1 | 0 | 0 | dihydrolipoamide S-acetyltransferase |
| Cluster | MI0057: |
| YCR052W | RSC6 | 5 | 2 | subunit of the RSC complex |
| YFR037C | RSC8 | 8 | 3 | subunit of the RSC complex |
| YGR056W | RSC1 | 3 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YIL126W | STH1 | 2 | 2 | subunit of the RSC complex |
| YKR008W | RSC4 | 0 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YLR321C | SFH1 | 9 | 3 | subunit of the RSC complex |
| YLR357W | RSC2 | 1 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YMR033W | ARP9 | 0 | 0 | Actin-related protein |
| YOR213C | SAS5 | 2 | 0 | subunit of the RSC complex |
| YPR034W | ARP7 | 0 | 0 | component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex |
| Cluster | MI0058: |
| YAR007C | RFA1 | 4 | 2 | DNA replication factor A, 69 KD subunit |
| YBL035C | POL12 | 0 | 0 | DNA-directed DNA polymerase alpha, 70 KD subunit |
| YBL023C | MCM2 | 4 | 2 | member of the MCM2P,MCM3P,CDC46P family |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YBR087W | RFC5 | 3 | 1 | DNA replication factor C, 40 KD subunit |
| YBR088C | POL30 | 1 | 1 | Proliferating Cell Nuclear Antigen (PCNA) |
| YBR202W | CDC47 | 4 | 3 | cell division control protein |
| YBR278W | DPB3 | 6 | 0 | DNA-directed DNA polymerase epsilon, subunit C |
| YCR014C | POL4 | 2 | 0 | DNA polymerase |
| YDL164C | CDC9 | 1 | 0 | DNA ligase |
| YDL102W | CDC2 | 2 | 2 | DNA-directed DNA polymerase delta, catalytic 125 KD subunit |
| YDL017W | CDC7 | 13 | 2 | protein kinase |
| YDR052C | DBF4 | 5 | 2 | regulatory subunit for CDC7P protein kinase |
| YEL032W | MCM3 | 2 | 2 | replication initiation protein |
| YER176W | ECM32 | 1 | 0 | DNA dependent ATPase/DNA helicase B |
| YGL201C | MCM6 | 4 | 1 | involved in replication |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YHR164C | DNA2 | 1 | 1 | DNA helicase |
| YIL139C | REV7 | 1 | 0 | DNA polymerase zeta subunit |
| YIL009C-A | EST3 | 0 | 0 | required for telomerase function |
| YIR008C | PRI1 | 1 | 0 | DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase) |
| YJL194W | CDC6 | 2 | 0 | cell division control protein |
| YJL173C | RFA3 | 5 | 2 | DNA replication factor A, 13 KD subunit |
| YJR006W | HYS2 | 3 | 2 | DNA-directed DNA polymerase delta, 55 KD subunit |
| YJR043C | POL32 | 4 | 4 | polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta |
| YJR068W | RFC2 | 2 | 1 | DNA replication factor C, 41 KD subunit |
| YKL113C | RAD27 | 4 | 1 | ssDNA endonuclease and 5'-3'exonuclease |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YLR103C | CDC45 | 3 | 2 | required for minichromosome maintenance and initiation of chromosomal DNA replication |
| YLR233C | EST1 | 7 | 1 | telomere elongation protein |
| YLR274W | CDC46 | 3 | 3 | cell division control protein |
| YLR318W | EST2 | 0 | 0 | catalytic subunit of the telomerase |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YMR234W | RNH1 | 0 | 0 | ribonuclease H |
| YNL312W | RFA2 | 3 | 2 | DNA replication factor A, 36 kDa subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YNL102W | POL1 | 4 | 1 | DNA-directed DNA polymerase alpha, 180 KD subunit |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YOR330C | MIP1 | 0 | 0 | DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial |
| YPL167C | REV3 | 0 | 0 | DNA-directed DNA polymerase zeta subunit |
| YPR019W | CDC54 | 0 | 0 | member of the CDC46P/MCM2P/MCM3P family |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| Cluster | MI0059: |
| YBL099W | ATP1 | 1 | 1 | F1F0-ATPase complex, F1 alpha subunit |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YDL181W | INH1 | 1 | 0 | inhibitor of mitochondrial ATPase |
| YDL067C | COX9 | 1 | 0 | cytochrome-c oxidase chain VIIA |
| YDL004W | ATP16 | 0 | 0 | F1F0-ATPase complex, F1 delta subunit |
| YDR178W | SDH4 | 1 | 0 | succinate dehydrogenase membrane anchor subunit for SDH2P |
| YDR298C | ATP5 | 1 | 1 | F1F0-ATPase complex, OSCP subunit |
| YDR322C-A | TIM11 | 1 | 1 | subunit E of the dimeric form of mitochondrial F1F0-ATPase |
| YDR377W | ATP17 | 1 | 1 | ATP synthase complex, subunit f |
| YDR529C | QCR7 | 2 | 0 | ubiquinol--cytochrome-c reductase subunit 7 |
| YEL024W | RIP1 | 2 | 0 | ubiquinol--cytochrome-c reductase iron-sulfur protein precursor |
| YFR033C | QCR6 | 1 | 0 | ubiquinol--cytochrome-c reductase 17K protein |
| YGL191W | COX13 | 0 | 0 | cytochrome-c oxidase chain VIa |
| YGL187C | COX4 | 4 | 2 | cytochrome-c oxidase chain IV |
| YGR183C | QCR9 | 0 | 0 | ubiquinol--cytochrome-c reductase subunit 9 |
| YGR207C | ETF-BETA | 2 | 0 | electron-transferring flavoprotein, beta chain |
| YHR001W-A | QCR10 | 0 | 0 | ubiquinol--cytochrome-c reductase 8.5 kDa subunit |
| YHR051W | COX6 | 0 | 0 | cytochrome-c oxidase subunit VI |
| YJL166W | QCR8 | 2 | 1 | ubiquinol--cytochrome-c reductase chain VIII |
| YJR121W | ATP2 | 2 | 0 | F1F0-ATPase complex, F1 beta subunit |
| YKL148C | SDH1 | 1 | 0 | succinate dehydrogenase flavoprotein precursor |
| YKL141W | SDH3 | 3 | 0 | cytochrome b560 subunit of respiratory complex II |
| YKL016C | ATP7 | 0 | 0 | F1F0-ATPase complex, FO D subunit |
| YLL041C | SDH2 | 1 | 0 | succinate dehydrogenase iron-sulfur protein subunit |
| YLR038C | COX12 | 1 | 0 | cytochrome-c oxidase, subunit VIB |
| YLR295C | ATP14 | 124 | 1 | F1F0-ATPase complex, subunit h |
| YLR395C | COX8 | 1 | 0 | cytochrome-c oxidase chain VIII |
| YML081C-A | ATP18 | 0 | 0 | gene for subunit i/j of the mitochondrial F1F0-ATP synthase |
| YMR256C | COX7 | 0 | 0 | cytochrome-c oxidase, subunit VII |
| YNL052W | COX5A | 0 | 0 | cytochrome-c oxidase chain V.A precursor |
| YOL077W-A | ATP19 | 0 | 0 | subunit K of the dimeric form of mitochondrial F1F0-ATP synthase |
| YOR065W | CYT1 | 1 | 0 | cytochrome-c1 |
| YPL271W | ATP15 | 1 | 0 | F1F0-ATPase complex, F1 epsilon subunit |
| YPL078C | ATP4 | 3 | 3 | F1F0-ATPase complex, F0 subunit B |
| YPR020W | ATP20 | 3 | 0 | subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| Q0045 | COX1 | 1 | 1 | cytochrome-c oxidase subunit I |
| Q0080 | AAP1 | 0 | 0 | F1F0-ATPase complex, F0 subunit 8 |
| Q0085 | ATP6 | 1 | 1 | F1F0-ATPase complex, FO A subunit |
| Q0105 | COB | 0 | 0 | ubiquinol-cytochrome-c reductase subunit (cytochrome B) |
| Q0130 | OLI1 | 0 | 0 | F1F0-ATPase complex, F0 subunit 9 |
| Q0250 | COX2 | 1 | 0 | cytochrome-c oxidase subunit II |
| Q0275 | COX3 | 2 | 1 | cytochrome-c oxidase chain III |
| Cluster | MI0060: |
| YER070W | RNR1 | 1 | 0 | ribonucleoside-diphosphate reductase, large subunit |
| YGR180C | RNR4 | 2 | 1 | ribonucleotide reductase small subunit |
| YIL066C | RNR3 | 1 | 0 | ribonucleotide reductase, repair inducible large subunit |
| YJL026W | RNR2 | 2 | 1 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | MI0061: |
| YAL043C | PTA1 | 8 | 4 | pre-tRNA processing protein / PF I subunit |
| YAL033W | POP5 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YAR008W | SEN34 | 5 | 3 | tRNA splicing endonuclease gamma subunit |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YBL018C | POP8 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YBR167C | POP7 | 2 | 1 | nuclear RNase P subunit |
| YBR188C | NTC20 | 4 | 0 | splicing factor |
| YBR237W | PRP5 | 1 | 0 | pre-mRNA processing RNA-helicase |
| YBR257W | POP4 | 0 | 0 | involved in processing of tRNAs and rRNAs |
| YCR018C | SRD1 | 0 | 0 | nucleolar protein |
| YCR035C | RRP43 | 6 | 4 | rRNA processing protein |
| YDL111C | RRP42 | 5 | 4 | rRNA processing protein |
| YDL069C | CBS1 | 0 | 0 | translational activator of COB mRNA |
| YDL048C | STP4 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YDL044C | MTF2 | 8 | 1 | mitochondrial protein involved in mRNA splicing and protein synthesis |
| YDL043C | PRP11 | 21 | 4 | pre-mRNA splicing factor |
| YDL030W | PRP9 | 18 | 3 | pre-mRNA splicing factor (snRNA-associated protein) |
| YDL014W | NOP1 | 3 | 2 | fibrillarin |
| YDR088C | SLU7 | 4 | 2 | pre-mRNA splicing factor affecting 3' splice site choice |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YDR197W | CBS2 | 0 | 0 | cytochrome B translational activator protein |
| YDR228C | PCF11 | 9 | 4 | component of pre-mRNA 3'-end processing factor CF I |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YDR280W | RRP45 | 1 | 1 | rRNA processing protein |
| YDR301W | CFT1 | 7 | 4 | pre-mRNA 3'-end processing factor CF II |
| YDR364C | CDC40 | 0 | 0 | cell division control protein |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YDR463W | STP1 | 1 | 0 | pre-tRNA splicing protein, transcription factor |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| YDR478W | SNM1 | 2 | 1 | RNA binding protein of RNase MRP |
| YER013W | PRP22 | 1 | 0 | pre-mRNA splicing factor |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YER165W | PAB1 | 15 | 4 | mRNA polyadenylate-binding protein |
| YER172C | BRR2 | 2 | 1 | RNA helicase-related protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YGL044C | RNA15 | 20 | 4 | component of pre-mRNA 3'-end processing factor CF I |
| YGR006W | PRP18 | 1 | 1 | U5 snRNA-associated protein |
| YGR030C | POP6 | 0 | 0 | required for processing of tRNAs and rRNAs |
| YGR074W | SMD1 | 10 | 2 | snRNA-associated protein |
| YGR075C | PRP38 | 2 | 1 | pre-mRNA splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YGR159C | NSR1 | 1 | 0 | nuclear localization sequence binding protein |
| YGR195W | SKI6 | 6 | 5 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YGR222W | PET54 | 3 | 0 | splicing protein and translational activator, mitochondrial |
| YHL038C | CBP2 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein 2 |
| YHL034C | SBP1 | 1 | 1 | single-strand nucleic acid binding protein |
| YHR005C-A | MRS11 | 3 | 0 | subunit of the TIM22-complex |
| YHR006W | STP2 | 0 | 0 | involved in pre-tRNA splicing |
| YHR062C | RPP1 | 2 | 1 | required for processing of tRNA and 35S rRNA |
| YHR065C | RRP3 | 1 | 0 | required for maturation of the 35S primary transcript |
| YHR069C | RRP4 | 4 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YHR165C | PRP8 | 1 | 0 | U5 snRNP protein, pre-mRNA splicing factor |
| YIL061C | SNP1 | 30 | 1 | U1 small nuclear ribonucleoprotein |
| YIR015W | RPR2 | 0 | 0 | RNase P subunit |
| YIR021W | MRS1 | 1 | 0 | involved in mitochondrial RNA splicing of COB mRNA |
| YJL209W | CBP1 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YJL133W | MRS3 | 0 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YJL087C | TRL1 | 1 | 0 | tRNA ligase |
| YJR093C | FIP1 | 10 | 6 | component of pre-mRNA polyadenylation factor PF I |
| YKL205W | LOS1 | 2 | 1 | pre-tRNA splicing protein |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YKL074C | MUD2 | 8 | 2 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 0 | splicing factor |
| YKR052C | MRS4 | 1 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YKR086W | PRP16 | 0 | 0 | RNA-dependent ATPase |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YLR105C | SEN2 | 6 | 3 | tRNA splicing endonuclease beta subunit |
| YLR115W | CFT2 | 6 | 4 | cleavage and polyadenylation specificity factor, part of CF II |
| YLR147C | SMD3 | 16 | 0 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YLR197W | SIK1 | 5 | 2 | involved in pre-rRNA processing |
| YLR223C | IFH1 | 2 | 0 | pre-rRNA processing machinery control protein |
| YLR277C | YSH1 | 10 | 4 | component of pre-mRNA polyadenylation factor PF I |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YLR375W | STP3 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YLR382C | NAM2 | 0 | 0 | leucine--tRNA ligase precursor, mitochondrial |
| YML046W | PRP39 | 2 | 1 | pre-mRNA splicing factor |
| YMR023C | MSS1 | 2 | 0 | mitochondrial GTPase involved in expression of COX1 |
| YMR059W | SEN15 | 3 | 3 | tRNA splicing endonuclease delta subunit |
| YMR061W | RNA14 | 8 | 5 | component of pre-mRNA 3'-end processing factor CF I |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YMR239C | RNT1 | 1 | 0 | double-stranded ribonuclease |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| YMR302C | PRP12 | 1 | 1 | involved in early maturation of pre-rRNA |
| YNL282W | POP3 | 2 | 0 | involved in processsing of tRNAs and rRNAs |
| YNL221C | POP1 | 3 | 1 | protein component of ribonuclease P and ribonuclease MRP |
| YNR011C | PRP2 | 1 | 0 | RNA-dependent ATPase of DEAH box family |
| YNR052C | POP2 | 8 | 0 | required for glucose derepression |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YOL102C | TPT1 | 1 | 0 | tRNA 2'-phosphotransferase |
| YOL021C | DIS3 | 5 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YOR048C | RAT1 | 0 | 0 | 5'-3' exoribonuclease |
| YOR148C | SPP2 | 1 | 0 | involved in pre-mRNA processing |
| YOR159C | SME1 | 6 | 0 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YOR250C | CLP1 | 1 | 1 | cleavage/polyadenylation factor IA subunit |
| YOR310C | NOP58 | 3 | 2 | required for pre-18S rRNA processing |
| YOR334W | MRS2 | 2 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YPL178W | CBC2 | 3 | 1 | small subunit of the nuclear cap-binding protein complex CBC |
| YPL083C | SEN54 | 4 | 3 | tRNA splicing endonuclease alpha subunit |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YPR134W | MSS18 | 1 | 0 | splicing protein |
| YPR178W | PRP4 | 4 | 1 | U4/U6 snRNP 52 KD protein |
| Q0120 | BI4 | 0 | 0 | mRNA maturase BI4 |
| Cluster | MI0062: |
| YML008C | ERG6 | 6 | 0 | S-adenosyl-methionine delta-24-sterol-c-methyltransferase |
| Cluster | MI0063: |
| YDL132W | CDC53 | 13 | 5 | controls G1/S transition |
| YDR054C | CDC34 | 7 | 4 | E2 ubiquitin-conjugating enzyme |
| YDR328C | SKP1 | 17 | 5 | kinetochore protein complex CBF3, subunit D |
| YFL009W | CDC4 | 4 | 3 | cell division control protein |
| YIL046W | MET30 | 12 | 3 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| YJR090C | GRR1 | 5 | 2 | required for glucose repression and for glucose and cation transport |
| Cluster | MI0064: |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YER054C | GIP2 | 1 | 0 | GLC7P-interacting protein |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YOR178C | GAC1 | 5 | 1 | ser/thr phosphoprotein phosphatase 1, regulatory chain |
| Cluster | MI0065: |
| YBL016W | FUS3 | 11 | 3 | mitogen-activated protein kinase (MAP kinase) |
| YDL159W | STE7 | 6 | 3 | ser/thr/tyr protein kinase of MAP kinase kinase family |
| YDR103W | STE5 | 12 | 5 | pheromone signal transduction pathway protein |
| YDR422C | SIP1 | 7 | 2 | multicopy suppressor of SNF1 |
| YDR477W | SNF1 | 10 | 5 | carbon catabolite derepressing ser/thr protein kinase |
| YER027C | GAL83 | 3 | 2 | glucose repression protein |
| YGL208W | SIP2 | 2 | 2 | dominant suppressor of some ts mutations in RPO21 and PRP4 |
| YGL115W | SNF4 | 10 | 4 | nuclear regulatory protein |
| YGR040W | KSS1 | 7 | 3 | ser/thr protein kinase of the MAP kinase family |
| YHR005C | GPA1 | 3 | 2 | GTP-binding protein alpha subunit of the pheromone pathway |
| YJL089W | SIP4 | 1 | 1 | interacts with SNF1 protein kinase |
| YJR086W | STE18 | 5 | 2 | GTP-binding protein gamma subunit of the pheromone pathway |
| YLR362W | STE11 | 16 | 6 | ser/thr protein kinase of the MEKK family |
| YOR212W | STE4 | 12 | 4 | GTP-binding protein beta subunit of the pheromone pathway |
| Cluster | MI0066: |
| YDR113C | PDS1 | 2 | 1 | cell cycle regulator |
| YGR098C | ESP1 | 1 | 1 | required for sister chromatid separation |
| Cluster | MI0067: |
| YAL047C | SPC72 | 6 | 3 | STU2P Interactant |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YBR211C | AME1 | 4 | 0 | actin related protein |
| YCL029C | BIK1 | 3 | 1 | nuclear fusion protein |
| YDR201W | SPC19 | 6 | 2 | spindle pole body protein |
| YDR356W | NUF1 | 4 | 4 | spindle pole body component |
| YER018C | SPC25 | 1 | 1 | spindle pole body protein |
| YGL093W | SPC105 | 0 | 0 | spindle pole body protein |
| YGL061C | DUO1 | 6 | 2 | essential mitotic spindle protein |
| YGR113W | DAM1 | 13 | 3 | essential mitotic spindle pole protein |
| YHR129C | ARP1 | 6 | 1 | centractin |
| YHR172W | SPC97 | 6 | 4 | spindle pole body component |
| YIL144W | TID3 | 17 | 4 | DMC1P interacting protein |
| YKL042W | SPC42 | 1 | 1 | spindle pole body component |
| YKR037C | SPC34 | 6 | 3 | spindle pole body protein |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YLR045C | STU2 | 3 | 2 | suppressor of a cs tubulin mutation |
| YLR212C | TUB4 | 7 | 2 | gamma tubulin |
| YMR065W | KAR5 | 1 | 0 | nuclear fusion protein |
| YMR117C | SPC24 | 20 | 2 | spindle pole body protein |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YNL225C | CNM67 | 1 | 0 | involved in cytokinesis |
| YNL188W | KAR1 | 1 | 1 | cell division control protein |
| YNL126W | SPC98 | 5 | 4 | spindle pole body component |
| YOL069W | NUF2 | 8 | 2 | spindle pole body protein |
| YOR257W | CDC31 | 2 | 1 | spindle pole body component, centrin |
| YOR373W | NUD1 | 0 | 0 | cell cycle regulatory protein |
| YPL255W | BBP1 | 11 | 0 | cell division control protein |
| YPL124W | NIP29 | 14 | 0 | nuclear import protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0068: |
| YGR244C | LSC2 | 1 | 0 | succinate-CoA ligase beta subunit |
| YOR142W | LSC1 | 0 | 0 | succinate-CoA ligase alpha subunit |
| Cluster | MI0069: |
| YDR285W | ZIP1 | 1 | 0 | synaptonemal complex protein |
| YIL072W | HOP1 | 1 | 1 | meiosis-specific protein |
| YLR263W | RED1 | 5 | 1 | meiosis-specific protein |
| Cluster | MI0070: |
| YAL003W | EFB1 | 3 | 3 | translation elongation factor eEF1beta |
| YBL092W | RPL32 | 2 | 0 | 60S large subunit ribosomal protein L32.e |
| YBL087C | RPL23A | 0 | 0 | 60S large subunit ribosomal protein L23.e |
| YBL080C | PET112 | 1 | 0 | required to maintain rho+ mitochondrial DNA |
| YBL072C | RPS8A | 2 | 0 | ribosomal protein S8.e |
| YBL038W | MRPL16 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YBL027W | RPL19B | 1 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR031W | RPL4A | 0 | 0 | ribosomal protein |
| YBR048W | RPS11B | 0 | 0 | ribosomal protein S11.e.B |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YBR084C-A | RPL19A | 0 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR118W | TEF2 | 2 | 2 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YBR122C | MRPL36 | 2 | 0 | ribosomal protein YmL36 precursor, mitochondrial |
| YBR143C | SUP45 | 4 | 1 | translational release factor |
| YBR146W | MRPS9 | 1 | 0 | ribosomal protein S9 precursor, mitochondrial |
| YBR181C | RPS6B | 0 | 0 | ribosomal protein S6.e |
| YBR189W | RPS9B | 0 | 0 | ribosomal protein S9.e.B |
| YBR191W | RPL21A | 0 | 0 | ribosomal protein L21.e |
| YBR251W | MRPS5 | 0 | 0 | ribosomal protein S5, mitochondrial |
| YBR268W | MRPL37 | 0 | 0 | ribosomal protein YmL37, mitochondrial |
| YBR282W | MRPL27 | 1 | 0 | ribosomal protein YmL27 precursor, mitochondrial |
| YCR003W | MRPL32 | 1 | 0 | ribosomal protein YmL32, mitochondrial |
| YCR031C | RPS14A | 0 | 0 | 40S Ribosomal protein S14.e |
| YCR046C | IMG1 | 1 | 0 | ribosomal protein, mitochondrial |
| YDL202W | MRPL11 | 2 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDL191W | RPL35A | 0 | 0 | 60S large subunit ribosomal protein |
| YDL184C | RPL41A | 0 | 0 | ribosomal protein |
| YDL136W | RPL35B | 0 | 0 | 60S large subunit ribosomal protein |
| YDL133C-A | RPL41B | 0 | 0 | ribosomal protein |
| YDL130W | RPP1B | 14 | 2 | 60S large subunit acidic ribosomal protein L44prime |
| YDL083C | RPS16B | 0 | 0 | ribosomal protein S16.e |
| YDL082W | RPL13A | 0 | 0 | 60S large subunit ribosomal protein L13 |
| YDL081C | RPP1A | 8 | 1 | 60S large subunit acidic ribosomal protein a1 |
| YDL075W | RPL31A | 1 | 0 | 60S large subunit ribosomal protein L31.e |
| YDL069C | CBS1 | 0 | 0 | translational activator of COB mRNA |
| YDL061C | RPS29B | 1 | 0 | ribosomal protein S29.e.B |
| YDL045W-A | MRP10 | 0 | 0 | mitochondrial ribosomal protein |
| YDR012W | RPL4B | 1 | 0 | ribosomal protein L4.e.B |
| YDR025W | RPS11A | 2 | 0 | ribosomal protein S11.e |
| YDR064W | RPS13 | 0 | 0 | ribosomal protein |
| YDR172W | SUP35 | 5 | 1 | eukaryotic peptide chain release factor GTP-binding subunit |
| YDR197W | CBS2 | 0 | 0 | cytochrome B translational activator protein |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YDR237W | MRPL7 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YDR347W | MRP1 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YDR382W | RPP2B | 4 | 2 | 60S large subunit acidic ribosomal protein |
| YDR385W | EFT2 | 1 | 0 | translation elongation factor eEF2 |
| YDR405W | MRP20 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR418W | RPL12B | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YDR429C | TIF35 | 6 | 2 | translation initiation factor eIF3 (p33 subunit) |
| YDR447C | RPS17B | 0 | 0 | ribosomal protein S17.e.B |
| YDR450W | RPS18A | 2 | 0 | ribosomal protein S18.e.c4 |
| YDR462W | MRPL28 | 0 | 0 | ribosomal protein of the large subunit (YmL28), mitochondrial |
| YDR471W | RPL27B | 0 | 0 | 60S large subunit ribosomal protein |
| YDR500C | RPL37B | 1 | 0 | ribosomal protein L.37.e |
| YEL054C | RPL12A | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YER056C-A | RPL34A | 1 | 0 | ribosomal protein L34 |
| YER074W | RPS24A | 0 | 0 | 40s small subunit ribosomal protein S24.e |
| YER102W | RPS8B | 3 | 0 | ribosomal protein S8.e |
| YER117W | RPL23B | 1 | 0 | ribosomal protein L23.e |
| YER131W | RPS26B | 2 | 0 | 40S small subunit ribosomal protein S26e-c5 |
| YER153C | PET122 | 2 | 1 | translational activator of cytochrome c oxidase subunit III |
| YER165W | PAB1 | 15 | 3 | mRNA polyadenylate-binding protein |
| YFL034C-A | RPL22B | 0 | 0 | ribosomal protein |
| YFR031C-A | RPL2A | 0 | 0 | ribosomal protein L8.e |
| YFR032C-A | RPL29 | 0 | 0 | 60S large subunit ribosomal protein |
| YFR049W | YMR31 | 9 | 0 | ribosomal protein, mitochondrial |
| YGL189C | RPS26A | 4 | 0 | 40S small subunit ribosomal protein S26e.c7 |
| YGL147C | RPL9A | 1 | 0 | ribosomal protein L9.e |
| YGL135W | RPL1B | 2 | 0 | 60S large subunit ribosomal protein |
| YGL123W | RPS2 | 0 | 0 | 40S small subunit ribosomal protein |
| YGL103W | RPL28 | 0 | 0 | 60S large subunit ribosomal protein L27a.e |
| YGL076C | RPL7A | 0 | 0 | 60S large subunit ribosomal protein L7.e.A |
| YGL049C | TIF4632 | 3 | 2 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGL031C | RPL24A | 0 | 0 | 60S large subunit ribosomal protein L24.e.A |
| YGL030W | RPL30 | 2 | 0 | 60S large subunit ribosomal protein L30.e |
| YGL023C | PIB2 | 1 | 1 | phosphatidylinositol 3-phosphate binding |
| YGR027C | RPS25A | 0 | 0 | ribosomal protein S25.e.c7 |
| YGR034W | RPL26B | 0 | 0 | 60S large subunit ribosomal protein |
| YGR076C | MRPL25 | 0 | 0 | ribosomal protein YmL25, mitochondrial |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YGR084C | MRP13 | 2 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YGR085C | RPL11B | 2 | 0 | ribosomal protein |
| YGR118W | RPS23A | 1 | 1 | 40S small subunit ribosomal protein S23.e |
| YGR148C | RPL24B | 1 | 0 | 60S large subunit ribosomal protein L24.e.B |
| YGR162W | TIF4631 | 6 | 5 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGR214W | RPS0A | 1 | 0 | 40S ribosomal protein p40 homolog A |
| YGR220C | MRPL9 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YGR222W | PET54 | 3 | 2 | splicing protein and translational activator, mitochondrial |
| YHL033C | RPL8A | 1 | 0 | 60S large subunit ribosomal protein L7a.e.A |
| YHL015W | RPS20 | 2 | 0 | ribosomal protein |
| YHL004W | MRP4 | 12 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHL001W | RPL14B | 1 | 0 | ribosomal protein |
| YHR010W | RPL27A | 0 | 0 | 60S large subunit ribosomal protein L27.e |
| YHR021C | RPS27B | 0 | 0 | ribosomal protein S27.e |
| YHR075C | PPE1 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHR141C | RPL42B | 0 | 0 | ribosomal protein L36a.e |
| YHR147C | MRPL6 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YHR203C | RPS4B | 0 | 0 | ribosomal protein S4.e.c8 |
| YIL148W | RPL40A | 0 | 0 | ubiquitin |
| YIL133C | RPL16A | 1 | 0 | 60S large subunit ribosomal protein |
| YIL069C | RPS24B | 0 | 0 | 40S small subunit ribosomal protein S24.e |
| YIL052C | RPL34B | 2 | 0 | ribosomal protein L34.e |
| YIL018W | RPL2B | 0 | 0 | 60S large subunit ribosomal protein L8.e |
| YJL191W | RPS14B | 1 | 0 | 40S small subunit ribosomal protein S14.e.B |
| YJL190C | RPS22A | 2 | 0 | ribosomal protein S15a.e.c10 |
| YJL189W | RPL39 | 1 | 0 | 60S large subunit ribosomal protein L39.e |
| YJL177W | RPL17B | 0 | 0 | 60s large subunit ribosomal protein L17.e |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YJL136C | RPS21B | 0 | 0 | 40S small subunit ribosomal protein S21.e |
| YJL096W | MRPL49 | 3 | 0 | ribosomal protein YmL49, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YJR047C | ANB1 | 0 | 0 | translation initiation factor eIF5A.2 |
| YJR094W-A | RPL43B | 0 | 0 | 60S large subunit ribosomal protein |
| YJR123W | RPS5 | 1 | 0 | ribosomal protein S5.e |
| YJR145C | RPS4A | 2 | 0 | ribosomal protein S4.e.c10 |
| YKL180W | RPL17A | 1 | 1 | ribosomal protein L17.e |
| YKL170W | MRPL38 | 0 | 0 | ribosomal protein of the large subunit (L14), mitochondrial |
| YKL167C | MRP49 | 0 | 0 | ribosomal protein, mitochondrial |
| YKL156W | RPS27A | 0 | 0 | ribosomal protein S27.e |
| YKL142W | MRP8 | 6 | 0 | ribosomal protein, mitochondrial |
| YKL138C | MRPL31 | 1 | 0 | ribosomal protein YmL31, mitochondrial |
| YKL081W | TEF4 | 1 | 1 | translation elongation factor eEF1, gamma chain |
| YKL006W | RPL14A | 0 | 0 | ribosomal protein |
| YKL003C | MRP17 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YKR006C | MRPL13 | 1 | 0 | ribosomal protein YmL13, mitochondrial |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YKR057W | RPS21A | 0 | 0 | ribosomal protein S21.e |
| YKR059W | TIF1 | 1 | 1 | translation initiation factor 4A |
| YKR084C | HBS1 | 1 | 0 | translation elongation factor eEF-1 alpha chain homolog |
| YKR085C | MRPL20 | 0 | 0 | ribosomal protein YmL20, mitochondrial |
| YKR094C | RPL40B | 0 | 0 | ubiquitin |
| YLL045C | RPL8B | 0 | 0 | 60s large subunit ribosomal protein L7a.e.B |
| YLR029C | RPL15A | 0 | 0 | 60s large subunit ribosomal protein L15.e.c12 |
| YLR048W | RPS0B | 0 | 0 | 40S ribosomal protein p40 homolog B |
| YLR061W | RPL22A | 0 | 0 | ribosomal protein |
| YLR067C | PET309 | 3 | 0 | required for stability and translation of COX1 mRNA |
| YLR075W | RPL10 | 1 | 0 | 60S large subunit ribosomal protein |
| YLR167W | RPS31 | 1 | 0 | ubiquitin/40S small subunit ribosomal protein |
| YLR185W | RPL37A | 1 | 0 | ribosomal protein L37.e |
| YLR203C | MSS51 | 2 | 0 | possibly involved in translational activation of COX1 and COB mRNA |
| YLR249W | YEF3 | 3 | 2 | translation elongation factor eEF3 |
| YLR264W | RPS28B | 7 | 0 | 40S small subunit ribosomal protein S28.e.c12 |
| YLR287C-A | RPS30A | 0 | 0 | 40S small subunit ribosomal protein |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YLR312W-A | MRPL15 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YLR325C | RPL38 | 3 | 0 | 60S large subunit ribosomal protein |
| YLR333C | RPS25B | 1 | 0 | ribosomal protein S25.e.c12 |
| YLR340W | RPP0 | 4 | 3 | acidic ribosomal protein L10.e |
| YLR344W | RPL26A | 1 | 0 | 60S large subunit ribosomal protein |
| YLR367W | RPS22B | 0 | 0 | ribosomal protein S15a.e.c12 |
| YLR388W | RPS29A | 1 | 0 | ribosomal protein S29.e.A |
| YLR406C | RPL31B | 1 | 0 | 60S large subunit ribosomal protein L31.e.c12 |
| YLR439W | MRPL4 | 1 | 0 | ribosomal protein, mitochondrial |
| YLR441C | RPS1A | 2 | 0 | ribosomal protein S3a.e |
| YLR448W | RPL6B | 1 | 0 | 60S large subunit ribosomal protein |
| YML073C | RPL6A | 0 | 0 | 60S large subunit ribosomal protein |
| YML063W | RPS1B | 0 | 0 | ribosomal protein S3a.e |
| YML026C | RPS18B | 0 | 0 | ribosomal protein S18.e.c13 |
| YML024W | RPS17A | 0 | 0 | ribosomal protein S17.e.A |
| YMR023C | MSS1 | 2 | 1 | mitochondrial GTPase involved in expression of COX1 |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR064W | AEP1 | 1 | 0 | nuclear control of ATPase messenger RNA expression protein |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YMR121C | RPL15B | 0 | 0 | 60S large subunit ribosomal protein L15.e.c13 |
| YMR142C | RPL13B | 0 | 0 | 60S large subunit ribosomal protein |
| YMR143W | RPS16A | 0 | 0 | ribosomal protein S16.e |
| YMR146C | TIF34 | 4 | 3 | translation initiation factor eIF3, p39 subunit |
| YMR193W | MRPL24 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR194W | RPL36A | 0 | 0 | 60S large subunit ribosomal protein |
| YMR225C | MRPL44 | 0 | 0 | ribosomal protein YMR44, mitochondrial |
| YMR230W | RPS10B | 0 | 0 | ribosomal protein |
| YMR242C | RPL20A | 1 | 0 | 60s large subunit ribosomal protein |
| YMR257C | PET111 | 0 | 0 | required for translation of COX2 mRNA |
| YMR260C | TIF11 | 1 | 0 | translation initiation factor eIF1a |
| YMR282C | AEP2 | 0 | 0 | required for the expression of subunit-9 of atp synthase |
| YMR286W | MRPL33 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR309C | NIP1 | 7 | 5 | associated with 40s ribosomal subunit |
| YNL306W | MRPS18 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YNL302C | RPS19B | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YNL301C | RPL18B | 3 | 0 | 60S large subunit ribosomal protein L18.e |
| YNL284C | MRPL10 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL252C | MRPL17 | 3 | 0 | ribosomal protein of the large subunit (YmL30), mitochondrial |
| YNL244C | SUI1 | 3 | 2 | translation initiation factor 3 (eIF3) |
| YNL185C | MRPL19 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL178W | RPS3 | 2 | 0 | ribosomal protein S3.e |
| YNL162W | RPL42A | 0 | 0 | ribosomal protein L36a.e |
| YNL137C | NAM9 | 0 | 0 | ribosomal protein, mitochondrial |
| YNL096C | RPS7B | 2 | 0 | strong similarity to ribosomal protein S7 (Class II) |
| YNL069C | RPL16B | 1 | 0 | 60S large subunit ribosomal protein |
| YNL067W | RPL9B | 0 | 0 | ribosomal protein L9.e.c14 |
| YNL062C | GCD10 | 3 | 1 | translation initiation factor eIF3 RNA-binding subunit |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YNR045W | PET494 | 1 | 1 | translational activator, mitochondrial |
| YOL139C | CDC33 | 5 | 4 | translation initiation factor eIF4E |
| YOL127W | RPL25 | 1 | 0 | ribosomal protein L23a.e |
| YOL121C | RPS19A | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YOL120C | RPL18A | 0 | 0 | 60S large subunit ribosomal protein S18.e |
| YOL040C | RPS15 | 0 | 0 | 40S small subunit ribosomal protein |
| YOL039W | RPP2A | 1 | 0 | acidic ribosomal protein P2.beta |
| YOR063W | RPL3 | 0 | 0 | 60S large subunit ribosomal protein L3.e |
| YOR096W | RPS7A | 1 | 0 | ribosomal protein |
| YOR133W | EFT1 | 1 | 0 | translation elongation factor eEF2 |
| YOR150W | MRPL23 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YOR158W | PET123 | 5 | 0 | ribosomal protein, mitochondrial |
| YOR167C | RPS28A | 14 | 0 | 40S small subunit ribosomal protein S28.e.c15 |
| YOR182C | RPS30B | 0 | 0 | ribosomal protein S30 |
| YOR234C | RPL33B | 0 | 0 | ribosomal protein L35a.e.c15 |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YOR276W | CAF20 | 3 | 2 | mRNA CAP-binding protein (eIF4F), 20K subunit |
| YOR293W | RPS10A | 0 | 0 | ribosomal protein S10.e |
| YOR312C | RPL20B | 0 | 0 | 60S large subunit ribosomal protein |
| YOR361C | PRT1 | 7 | 7 | translation initiation factor eIF3 subunit |
| YOR369C | RPS12 | 0 | 0 | 40S small subunit acidic ribosomal protein S12 |
| YPL249C-A | RPL36B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YPL220W | RPL1A | 0 | 0 | ribosomal protein |
| YPL198W | RPL7B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL173W | MRPL40 | 0 | 0 | ribosomal protein of the large subunit (YmL40), mitochondrial |
| YPL143W | RPL33A | 0 | 0 | ribosomal protein L35a.e.c16 |
| YPL131W | RPL5 | 2 | 0 | 60S large subunit ribosomal protein L5.e |
| YPL090C | RPS6A | 0 | 0 | ribosomal protein S6.e |
| YPL081W | RPS9A | 0 | 0 | ribosomal protein S9.e.A |
| YPL079W | RPL21B | 0 | 0 | ribosomal protein L21 |
| YPL048W | CAM1 | 0 | 0 | translation elongation factor eEF1 gamma homologue |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| YPR041W | TIF5 | 3 | 2 | translation initiation factor eIF5 |
| YPR043W | RPL43A | 0 | 0 | ribosomal protein L37a.e |
| YPR080W | TEF1 | 2 | 2 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| YPR102C | RPL11A | 0 | 0 | ribosomal protein L11.e |
| YPR132W | RPS23B | 0 | 0 | 40S small subunit ribosomal protein S23.e |
| YPR163C | TIF3 | 5 | 0 | translation initiation factor eIF4B |
| YPR166C | MRP2 | 0 | 0 | ribosomal protein S14 |
| Q0140 | VAR1 | 0 | 0 | mitochondrial ribosomal protein |
| Cluster | MI0071: |
| YAL051W | OAF1 | 1 | 1 | peroxisome proliferating transcription factor |
| YAL021C | CCR4 | 2 | 2 | transcriptional regulator |
| YAL001C | TFC3 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 138 kD |
| YBL103C | RTG3 | 1 | 1 | bHLH/zip transcription factor that regulates CIT2 gene expression |
| YBL093C | ROX3 | 0 | 0 | transcription factor |
| YBL025W | RRN10 | 5 | 1 | RNA polymerase I-specific transcription initiation factor |
| YBL021C | HAP3 | 4 | 3 | CCAAT-binding factor subunit |
| YBL014C | RRN6 | 4 | 2 | RNA polymerase I specific transcription initiation factor |
| YBR081C | SPT7 | 13 | 13 | involved in alteration of transcription start site selection |
| YBR112C | CYC8 | 4 | 1 | general repressor of transcription |
| YBR114W | RAD16 | 3 | 1 | nucleotide excision repair protein |
| YBR123C | TFC1 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 95 kD |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YBR193C | MED8 | 13 | 9 | transcriptional regulation mediator |
| YBR198C | TAF90 | 16 | 13 | TFIID and SAGA subunit |
| YBR253W | SRB6 | 1 | 1 | DNA-directed RNA polymerase II suppressor protein |
| YBR289W | SNF5 | 1 | 1 | component of SWI/SNF transcription activator complex |
| YCR042C | TSM1 | 1 | 1 | component of TFIID complex |
| YCR084C | TUP1 | 3 | 1 | general transcription repressor |
| YCR092C | MSH3 | 3 | 3 | DNA mismatch repair protein |
| YCR093W | CDC39 | 4 | 3 | nuclear protein |
| YDL165W | CDC36 | 6 | 1 | transcription factor |
| YDL160C | DHH1 | 13 | 3 | putative RNA helicase of the DEAD box family |
| YDL140C | RPO21 | 4 | 2 | DNA-directed RNA polymerase II, 215 KD subunit |
| YDL108W | KIN28 | 5 | 3 | cyclin-dependent ser/thr protein kinase |
| YDL056W | MBP1 | 1 | 1 | transcription factor, subunit of the MBF factor |
| YDL005C | MED2 | 7 | 6 | transcriptional regulation mediator |
| YDR004W | RAD57 | 3 | 1 | DNA repair protein |
| YDR009W | GAL3 | 1 | 1 | galactokinase |
| YDR073W | SNF11 | 4 | 1 | component of SWI/SNF transcription activator complex |
| YDR076W | RAD55 | 2 | 2 | DNA repair protein |
| YDR097C | MSH6 | 3 | 3 | DNA mismatch repair protein |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YDR145W | TAF61 | 14 | 13 | TFIID and SAGA subunit |
| YDR156W | RPA14 | 2 | 1 | DNA-directed RNA polymerase I, A14 subunit |
| YDR167W | TAF25 | 22 | 19 | TFIID and SAGA subunit |
| YDR173C | ARG82 | 0 | 0 | arginine metabolism transcription factor |
| YDR176W | NGG1 | 23 | 14 | general transcriptional adaptor or co-activator |
| YDR207C | UME6 | 8 | 2 | negative transcriptional regulator |
| YDR253C | MET32 | 0 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YDR308C | SRB7 | 4 | 2 | DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit |
| YDR311W | TFB1 | 24 | 1 | TFIIH subunit (transcription initiation factor), 75 kD |
| YDR362C | TFC6 | 2 | 1 | TFIIIC (transcription initiation factor) subunit, 91 kD |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YDR392W | SPT3 | 14 | 14 | general transcriptional adaptor or co-activator |
| YDR397C | NCB2 | 1 | 1 | functional homolog of human NC2beta/Dr1 |
| YDR404C | RPB7 | 2 | 1 | DNA-directed RNA polymerase II, 19 KD subunit |
| YDR448W | ADA2 | 21 | 15 | general transcriptional adaptor or co-activator |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YEL037C | RAD23 | 6 | 1 | nucleotide excision repair protein (ubiquitin-like protein) |
| YER001W | MNN1 | 0 | 0 | alpha-1,3-mannosyltransferase |
| YER022W | SRB4 | 101 | 12 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YER068W | MOT2 | 3 | 3 | transcriptional repressor |
| YER095W | RAD51 | 11 | 3 | DNA repair protein |
| YER148W | SPT15 | 10 | 8 | the TATA-binding protein TBP |
| YER159C | BUR6 | 2 | 1 | functional homolog of human NC2alpha |
| YER162C | RAD4 | 3 | 2 | excision repair protein |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YER179W | DMC1 | 15 | 0 | meiosis-specific protein |
| YFL028C | CAF16 | 1 | 1 | ATP-binding cassette transporter family member |
| YGL237C | HAP2 | 8 | 3 | CCAAT-binding factor subunit |
| YGL163C | RAD54 | 1 | 1 | DNA-dependent ATPase of the SNF2P family |
| YGL151W | NUT1 | 0 | 0 | negative transcription regulator from artifical reporters |
| YGL130W | CEG1 | 2 | 2 | mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit) |
| YGL112C | TAF60 | 19 | 13 | TFIID and SAGA subunit |
| YGL090W | LIF1 | 4 | 1 | DNA ligase IV interacting factor |
| YGL070C | RPB9 | 44 | 0 | DNA-directed RNA polymerase II, 14.2 KD subunit |
| YGL025C | PGD1 | 8 | 6 | mediator complex subunit |
| YGR005C | TFG2 | 2 | 1 | TFIIF subunit (transcription initiation factor), 54 kD |
| YGR047C | TFC4 | 4 | 2 | TFIIIC (transcription initiation factor) subunit, 131 kD |
| YGR092W | DBF2 | 7 | 4 | ser/thr protein kinase related to DBF20P |
| YGR104C | SRB5 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YGR186W | TFG1 | 0 | 0 | TFIIF subunit (transcription initiation factor), 105 kD |
| YGR246C | BRF1 | 3 | 3 | TFIIIB subunit, 70 kD |
| YGR252W | GCN5 | 16 | 13 | histone acetyltransferase |
| YGR258C | RAD2 | 0 | 0 | structure-specific nuclease of the nucleotide excision repairosome |
| YGR274C | TAF145 | 2 | 2 | TFIID subunit (TBP-associated factor), 145 kD |
| YHL025W | SNF6 | 2 | 0 | global transcription activator |
| YHR041C | SRB2 | 18 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YHR058C | MED6 | 6 | 2 | RNA polymerase II transcriptional regulation mediator |
| YHR099W | TRA1 | 15 | 13 | component of the Ada-Spt transcriptional regulatory complex |
| YHR143W-A | RPC10 | 2 | 1 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YIL106W | MOB1 | 9 | 4 | required for completion of mitosis and maintenance of ploidy |
| YIL038C | NOT3 | 3 | 3 | general negative regulator of transcription, subunit 3 |
| YIL021W | RPB3 | 8 | 8 | DNA-directed RNA-polymerase II, 45 kDa |
| YIR017C | MET28 | 7 | 2 | transcriptional activator of sulfur amino acid metabolism |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YJL148W | RPA34 | 0 | 0 | nonessential component of RNA-polI |
| YJL140W | RPB4 | 4 | 1 | DNA-directed RNA polymerase II, 32 kDa subunit |
| YJL025W | RRN7 | 2 | 2 | polymerase I specific transcription initiation factor |
| YJL006C | CTK2 | 2 | 2 | carboxy-terminal domain (CTD) kinase, beta subunit |
| YJR052W | RAD7 | 2 | 2 | nucleotide excision repair protein |
| YJR060W | CBF1 | 2 | 2 | kinetochore protein |
| YJR063W | RPA12 | 18 | 2 | DNA-directed RNA polymerase I, 13.7 KD subunit |
| YJR094C | IME1 | 3 | 2 | transcription factor required for sporulation |
| YJR122W | CAF17 | 3 | 2 | CCR4 associated factor |
| YKL144C | RPC25 | 3 | 0 | DNA-direcred RNA polymerase III, 25 KD subunit |
| YKL139W | CTK1 | 2 | 2 | carboxy-terminal domain (CTD) kinase, alpha subunit |
| YKL109W | HAP4 | 3 | 3 | CCAAT-binding factor subunit |
| YKL058W | TOA2 | 4 | 2 | TFIIA subunit (transcription initiation factor), 13.5 kD |
| YKL028W | TFA1 | 3 | 2 | TFIIE subunit (transcription initiation factor), 66 kD |
| YKR036C | CAF4 | 0 | 0 | CCR4 associated factor |
| YKR062W | TFA2 | 1 | 1 | TFIIE subunit (transcription initiation factor), 43 KD |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YLR055C | SPT8 | 13 | 13 | transcriptional adaptor or co-activator |
| YLR071C | RGR1 | 2 | 1 | DNA-directed RNA polymerase II holoenzyme subunit |
| YLR141W | RRN5 | 2 | 0 | RNA polymerase I specific transcription initiation factor |
| YLR182W | SWI6 | 6 | 1 | transcription factor |
| YLR418C | CDC73 | 1 | 0 | DNA-directed RNA polymerase II accessory protein |
| YLR451W | LEU3 | 1 | 0 | transcription factor |
| YML112W | CTK3 | 3 | 2 | carboxy-terminal domain (CTD) kinase, gamma subunit |
| YML099C | ARG81 | 3 | 1 | transcription factor involved in arginine metabolism |
| YML098W | TAF19 | 4 | 2 | TFIID subunit (TBP-associated factor), 19 kD |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YML051W | GAL80 | 3 | 2 | negative regulator for expression of galactose-induced genes |
| YML043C | RRN11 | 3 | 2 | RNA polymerase I specific transcription initiation factor |
| YML032C | RAD52 | 5 | 1 | recombination and DNA repair protein |
| YML015C | TAF40 | 5 | 2 | TFIID subunit (TBP-associated factor), 40KD |
| YMR033W | ARP9 | 0 | 0 | Actin-related protein |
| YMR042W | ARG80 | 2 | 2 | transcription factor involved in arginine metabolism |
| YMR043W | MCM1 | 6 | 1 | transcription factor of the MADS box family |
| YMR053C | STB2 | 2 | 1 | SIN3P binding protein |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| YMR112C | MED11 | 3 | 2 | mediator complex subunit |
| YMR167W | MLH1 | 4 | 4 | DNA mismatch repair protein |
| YMR201C | RAD14 | 1 | 0 | nucleotide excision repair protein |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YMR227C | TAF67 | 0 | 0 | TFIID subunit (TBP-associated factor), 67 kD |
| YMR236W | TAF17 | 20 | 13 | TFIID and SAGA subunit |
| YMR270C | RRN9 | 2 | 1 | RNA polymerase I specific transcription initiation factor |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| YNL309W | STB1 | 2 | 1 | SIN3P binding protein |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YNL248C | RPA49 | 0 | 0 | DNA-directed RNA polymerase A (I) chain, 46 kDa |
| YNL236W | SIN4 | 12 | 2 | global regulator protein |
| YNL199C | GCR2 | 3 | 0 | glycolytic genes transcriptional activator |
| YNL151C | RPC31 | 2 | 2 | DNA-directed RNA polymerase III, 31 KD subunit |
| YNL113W | RPC19 | 7 | 3 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YNL103W | MET4 | 3 | 2 | transcriptional activator of sulfur metabolism |
| YNL082W | PMS1 | 4 | 4 | DNA mismatch repair protein |
| YNL039W | TFC5 | 4 | 1 | TFIIIB subunit, 90 kD |
| YNR003C | RPC34 | 4 | 3 | DNA-directed RNA polymerase III, 34 KD subunit |
| YNR010W | CSE2 | 2 | 1 | subunit of RNA polymerase II mediator complex |
| YNR023W | SNF12 | 0 | 0 | component of SWI/SNF global transcription activator complex |
| YNR052C | POP2 | 8 | 5 | required for glucose derepression |
| YOL148C | SPT20 | 15 | 15 | member of the TBP class of SPT proteins that alter transcription site selection |
| YOL135C | MED7 | 9 | 7 | member of RNA Polymerase II transcriptional regulation mediator complex |
| YOL090W | MSH2 | 5 | 4 | DNA mismatch repair protein |
| YOL067C | RTG1 | 1 | 1 | basic helix-loop-helix transcription factor that regulates CIT2 gene expression |
| YOL051W | GAL11 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YOL005C | RPB11 | 1 | 1 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YOL004W | SIN3 | 8 | 4 | transcription regulatory protein |
| YOR005C | DNL4 | 1 | 1 | DNA ligase IV |
| YOR110W | TFC7 | 5 | 2 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YOR151C | RPB2 | 2 | 2 | DNA-directed RNA polymerase II, 140 kDa chain |
| YOR174W | MED4 | 11 | 8 | transcription regulation mediator |
| YOR194C | TOA1 | 5 | 2 | TFIIA subunit (transcription initiation factor), 32 kD |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YOR290C | SNF2 | 3 | 2 | component of SWI/SNF global transcription activator complex |
| YOR340C | RPA43 | 1 | 0 | DNA-directed RNA polymerase I, 36 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YOR358W | HAP5 | 7 | 3 | CCAAT-binding factor subunit |
| YOR363C | PIP2 | 1 | 1 | peroxisome proliferating transcription factor |
| YPL254W | HFI1 | 13 | 13 | transcriptional coactivator |
| YPL248C | GAL4 | 2 | 1 | transcription factor |
| YPL228W | CET1 | 1 | 1 | RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit) |
| YPL129W | ANC1 | 2 | 2 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL122C | TFB2 | 0 | 0 | TFIIH subunit (transcription/repair factor) |
| YPL086C | ELP3 | 0 | 0 | subunit of elongator/RNAPII holoenzyme with histone acetylase activity |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YPL075W | GCR1 | 1 | 0 | transcriptional activator |
| YPL038W | MET31 | 1 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| YPL011C | TAF47 | 2 | 1 | component of the TBP-associated protein complex |
| YPR010C | RPA135 | 5 | 4 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| YPR034W | ARP7 | 0 | 0 | component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex |
| YPR056W | TFB4 | 1 | 0 | component of RNA polymerase transcription initiation TFIIH factor |
| YPR072W | NOT5 | 4 | 3 | component of the NOT protein complex |
| YPR086W | SUA7 | 100 | 6 | TFIIB subunit (transcription initiation factor), factor E |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YPR168W | NUT2 | 3 | 0 | negative transcription regulator from artifical reporters |
| YPR186C | PZF1 | 0 | 0 | TFIIIA (transcription initiation factor) |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YPR190C | RPC82 | 2 | 2 | DNA-directed RNA polymerase III, 82 KD subunit |
| Cluster | MI0072: |
| YBR171W | SEC66 | 3 | 0 | ER protein-translocation complex subunit |
| YDL232W | OST4 | 0 | 0 | oligosaccharyltransferase subunit |
| YDL092W | SRP14 | 1 | 1 | signal recognition particle subunit |
| YDR086C | SSS1 | 1 | 1 | ER protein-translocase complex subunit |
| YDR292C | SRP101 | 2 | 1 | signal recognition particle receptor, alpha chain |
| YEL002C | WBP1 | 2 | 2 | oligosaccharyl transferase beta subunit precursor |
| YER019C-A | SBH2 | 2 | 0 | ER protein-translocation complex subunit |
| 0 | 0 |
| YGL226C-A | OST5 | 0 | 0 | subunit of N-oligosaccharyltransferase, zeta subunit |
| YGL022W | STT3 | 3 | 3 | oligosaccharyl transferase subunit |
| YIR022W | SEC11 | 2 | 1 | signal sequence processing protein |
| YJL034W | KAR2 | 2 | 1 | nuclear fusion protein |
| YJL002C | OST1 | 2 | 1 | oligosaccharyltransferase, alpha subunit |
| YJR010C-A | SPC1 | 3 | 1 | signal peptidase 10.8 kDa subunit |
| YKL154W | SRP102 | 2 | 1 | signal recognition particle receptor, beta chain |
| YKL122C | SRP21 | 1 | 1 | signal recognition particle subunit |
| YLR292C | SEC72 | 1 | 0 | ER protein-translocation complex subunit |
| YLR378C | SEC61 | 2 | 1 | ER protein-translocation complex subunit |
| YML105C | SEC65 | 3 | 1 | signal recognition particle subunit |
| YML055W | SPC2 | 4 | 0 | signal peptidase 18 KD subunit |
| YML019W | OST6 | 1 | 0 | N-oligosaccharyltransferase complex subunit |
| YMR149W | SWP1 | 4 | 2 | oligosaccharyltransferase delta subunit |
| YOR085W | OST3 | 0 | 0 | oligosaccharyltransferase gamma subunit |
| YOR103C | OST2 | 0 | 0 | oligosaccharyltransferase epsilon subunit |
| YOR254C | SEC63 | 1 | 1 | ER protein-translocation complex subunit |
| YPL243W | SRP68 | 0 | 0 | signal recognition particle protein |
| YPL210C | SRP72 | 0 | 0 | signal recognition particle protein |
| YPL094C | SEC62 | 3 | 0 | ER protein-translocation complex subunit |
| YPR088C | SRP54 | 2 | 1 | signal recognition particle subunit |
| Cluster | MI0084: |
| YBR195C | MSI1 | 3 | 1 | chromatin assembly complex, subunit p50 |
| YML102W | CAC2 | 2 | 1 | chromatin assembly complex, subunit p60 |
| YPR018W | RLF2 | 3 | 2 | chromatin assembly complex, subunit p90 |
| Cluster | MI0085: |
| YDL077C | VAM6 | 2 | 1 | vacuolar carboxypeptidase Y |
| YDR080W | VPS41 | 1 | 1 | required for the vacuolar assembly |
| Cluster | MI0086: |
| YHR060W | VMA22 | 10 | 1 | vacuolar ATPase assembly protein |
| YKL119C | VPH2 | 2 | 1 | H+-ATPase assembly protein |
| Cluster | MI0089: |
| YER123W | YCK3 | 1 | 0 | casein kinase, isoform 3 |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| Cluster | MI0090: |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| Cluster | MI0091: |
| YDR256C | CTA1 | 4 | 0 | catalase A, peroxisomal |
| Cluster | MI0092: |
| YGR088W | CTT1 | 1 | 0 | catalase T, cytosolic |
| Cluster | MI0096: |
| YAL040C | CLN3 | 7 | 1 | cyclin, G1/S-specific |
| YBR160W | CDC28 | 14 | 9 | cyclin-dependent protein kinase |
| YDL155W | CLB3 | 5 | 1 | cyclin, G2/M-specific |
| YGR108W | CLB1 | 3 | 1 | cyclin, G2/M-specific |
| YGR109C | CLB6 | 1 | 1 | cyclin, B-type |
| YLR210W | CLB4 | 4 | 1 | cyclin, G2/M-specific |
| YMR199W | CLN1 | 5 | 1 | cyclin, G1/S-specific |
| YPL256C | CLN2 | 3 | 1 | cyclin, G1/S-specific |
| YPR119W | CLB2 | 12 | 1 | cyclin, G2/M-specific |
| YPR120C | CLB5 | 3 | 1 | cyclin, B-type |
| Cluster | MI0097: |
| YDL127W | PCL2 | 5 | 1 | cyclin, G1/S-specific |
| YGL134W | PCL10 | 2 | 1 | cyclin like protein interacting with PHO85P |
| YNL289W | PCL1 | 1 | 1 | cyclin, G1/S-specific |
| YOL001W | PHO80 | 1 | 1 | cyclin |
| YPL219W | PCL8 | 2 | 1 | cyclin like protein interacting with PHO85P |
| YPL031C | PHO85 | 14 | 5 | cyclin-dependent protein kinase |
| Cluster | MI0098: |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YPR025C | CCL1 | 4 | 1 | TFIIH subunit (transcription initiation factor), cyclin C component |
| Cluster | MI0099: |
| YCR081W | SRB8 | 1 | 0 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit |
| YDR443C | SSN2 | 0 | 0 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit |
| YNL025C | SSN8 | 5 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog |
| YPL042C | SSN3 | 1 | 1 | cyclin-dependent CTD kinase |
| Cluster | MI0100: |
| YJL006C | CTK2 | 2 | 2 | carboxy-terminal domain (CTD) kinase, beta subunit |
| YKL139W | CTK1 | 2 | 2 | carboxy-terminal domain (CTD) kinase, alpha subunit |
| YML112W | CTK3 | 3 | 2 | carboxy-terminal domain (CTD) kinase, gamma subunit |
| Cluster | MI0101: |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YDL225W | SHS1 | 5 | 4 | septin |
| YDR218C | SPR28 | 2 | 2 | septin-related sporulation protein |
| YGR059W | SPR3 | 1 | 1 | sporulation-specific septin |
| YHR107C | CDC12 | 9 | 4 | septin |
| YJR076C | CDC11 | 6 | 5 | septin |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| YML104C | MDM1 | 2 | 0 | intermediate filament protein |
| Cluster | MI0102: |
| YAL029C | MYO4 | 1 | 1 | myosin heavy chain, unconventional (class V) isoform |
| YBL007C | SLA1 | 2 | 1 | cytoskeleton assembly control protein |
| YBR172C | SMY2 | 2 | 0 | kinesin-related protein |
| YBR200W | BEM1 | 10 | 2 | bud emergence mediator |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YCL040W | GLK1 | 6 | 1 | aldohexose specific glucokinase |
| YCR088W | ABP1 | 4 | 3 | actin-binding protein |
| YDL178W | AIP2 | 2 | 2 | actin interacting protein 2 |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR129C | SAC6 | 1 | 1 | actin filament bundling protein, fimbrin |
| YDR388W | RVS167 | 9 | 3 | reduced viability upon starvation protein |
| YFL039C | ACT1 | 22 | 17 | actin |
| YGR080W | TWF1 | 2 | 1 | twinfilin, an actin monomer sequestering protein |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YHR179W | OYE2 | 2 | 1 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YIL138C | TPM2 | 1 | 1 | tropomyosin, isoform 2 |
| YIL034C | CAP2 | 16 | 1 | F-actin capping protein, beta subunit |
| YIR006C | PAN1 | 8 | 0 | actin-cytoskeleton assembly protein |
| YKL129C | MYO3 | 0 | 0 | myosin type I |
| YKL079W | SMY1 | 2 | 0 | kinesin-related protein |
| YKL007W | CAP1 | 2 | 0 | F-actin capping protein alpha subunit |
| YLL050C | COF1 | 3 | 1 | cofilin, actin binding and severing protein |
| YLR319C | BUD6 | 9 | 1 | bud site selection protein |
| YLR337C | VRP1 | 1 | 1 | verprolin |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| YMR092C | AIP1 | 4 | 1 | actin cytoskeleton component |
| YMR109W | MYO5 | 1 | 0 | myosin I |
| YNL243W | SLA2 | 2 | 0 | cytoskeleton assembly control protein |
| YNL138W | SRV2 | 3 | 2 | adenylate cyclase-associated protein, 70kDa |
| YNL079C | TPM1 | 0 | 0 | tropomyosin 1 |
| YOR122C | PFY1 | 4 | 1 | profilin |
| YOR181W | LAS17 | 6 | 4 | component of actin cortical patches |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| Cluster | MI0103: |
| YBL078C | AUT7 | 4 | 1 | essential for autophagy |
| YBL063W | KIP1 | 1 | 0 | kinesin-related protein |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YCL029C | BIK1 | 3 | 3 | nuclear fusion protein |
| YDR424C | DYN2 | 0 | 0 | dynein light chain 1, cytosolic |
| YDR488C | PAC11 | 2 | 1 | required in the absence of CIN8P |
| YEL061C | CIN8 | 2 | 0 | kinesin-related protein |
| YER016W | BIM1 | 4 | 3 | binding to microtubules |
| YFL037W | TUB2 | 4 | 3 | beta-tubulin |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| YGL005C | 2 | 0 | weak similarity to Xenopus kinesin-related protein Eg5 (Class III) |
| YHR129C | ARP1 | 6 | 2 | centractin |
| YHR156C | 3 | 0 | weak similarity to mouse kinesin KIF3B (Class III) |
| YJL042W | MHP1 | 2 | 0 | microtubule-associated protein |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YLR045C | STU2 | 3 | 1 | suppressor of a cs tubulin mutation |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YLR212C | TUB4 | 7 | 1 | gamma tubulin |
| YML124C | TUB3 | 1 | 1 | alpha-3 tubulin |
| YML085C | TUB1 | 5 | 4 | alpha-1 tubulin |
| YMR138W | CIN4 | 3 | 0 | GTP-binding protein |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YNL223W | AUT2 | 3 | 3 | essential for autophagy |
| YNL126W | SPC98 | 5 | 1 | spindle pole body component |
| YOR058C | ASE1 | 0 | 0 | microtubule-associated protein (nonmotor) |
| YOR265W | RBL2 | 3 | 1 | beta-tubulin binding protein |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YPL241C | CIN2 | 2 | 0 | involved in chromosome segregation |
| YPL174C | NIP100 | 8 | 3 | component of the dynactin complex |
| YPL155C | KIP2 | 1 | 0 | kinesin-related protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0112: |
| YDL090C | RAM1 | 1 | 1 | protein farnesyltransferase, beta subunit |
| YKL019W | RAM2 | 3 | 1 | protein farnesyltransferase, alpha subunit |
| Cluster | MI0113: |
| YGL155W | CDC43 | 1 | 1 | geranylgeranyltransferase beta subunit |
| YKL019W | RAM2 | 3 | 1 | protein farnesyltransferase, alpha subunit |
| Cluster | MI0114: |
| YJL031C | BET4 | 2 | 1 | geranylgeranyl transferase, alpha chain |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| YPR176C | BET2 | 1 | 1 | geranylgeranyltransferase type II beta subunit |
| Cluster | MI0115: |
| YCR034W | FEN1 | 1 | 0 | fatty acid elongase required for sphingolipid formation |
| YGR032W | GSC2 | 0 | 0 | 1,3-beta-D-glucan synthase subunit |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| Cluster | MI0116: |
| YGR143W | SKN1 | 0 | 0 | glucan synthase subunit |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| Cluster | MI0121: |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | MI0122: |
| YBR081C | SPT7 | 13 | 13 | involved in alteration of transcription start site selection |
| YBR198C | TAF90 | 16 | 13 | TFIID and SAGA subunit |
| YDR145W | TAF61 | 14 | 13 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 13 | TFIID and SAGA subunit |
| YDR176W | NGG1 | 23 | 13 | general transcriptional adaptor or co-activator |
| YDR392W | SPT3 | 14 | 13 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 13 | general transcriptional adaptor or co-activator |
| YGL112C | TAF60 | 19 | 13 | TFIID and SAGA subunit |
| YGR252W | GCN5 | 16 | 13 | histone acetyltransferase |
| YHR099W | TRA1 | 15 | 13 | component of the Ada-Spt transcriptional regulatory complex |
| YLR055C | SPT8 | 13 | 13 | transcriptional adaptor or co-activator |
| YMR236W | TAF17 | 20 | 13 | TFIID and SAGA subunit |
| YOL148C | SPT20 | 15 | 13 | member of the TBP class of SPT proteins that alter transcription site selection |
| YOR244W | ESA1 | 2 | 0 | histone acetyltransferase |
| YPL254W | HFI1 | 13 | 13 | transcriptional coactivator |
| Cluster | MI0123: |
| YNL021W | HDA1 | 3 | 0 | histone deacetylase A |
| Cluster | MI0124: |
| YMR263W | SAP30 | 5 | 1 | subunit of the histone deacetylase B complex |
| YNL330C | RPD3 | 4 | 2 | histone deacetylase B |
| YOL004W | SIN3 | 8 | 1 | transcription regulatory protein |
| Cluster | MI0127: |
| YGL206C | CHC1 | 3 | 1 | clathrin heavy chain |
| YGR167W | CLC1 | 5 | 1 | clathrin light chain |
| Cluster | MI0128: |
| YBL078C | AUT7 | 4 | 1 | essential for autophagy |
| YNL223W | AUT2 | 3 | 1 | essential for autophagy |
| Cluster | MI0129: |
| YBR097W | VPS15 | 1 | 0 | ser/thr protein kinase |
| Cluster | MI0130: |
| YBL037W | APL3 | 0 | 0 | AP-2 complex subunit, alpha-adaptin, 113 KD |
| YBR288C | APM3 | 2 | 1 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YGR261C | APL6 | 1 | 1 | AP-3 complex subunit, beta3-adaptin, 91 KD |
| YHL019C | APM2 | 4 | 2 | involved in clathrin-independent transport processes |
| YJL024C | APS3 | 1 | 1 | AP-3 complex subunit, sigma3 subunit, 22 KD |
| YJR005W | APL1 | 3 | 0 | AP-2 complex subunit, beta2-adaptin, 78 KD |
| YJR058C | APS2 | 2 | 0 | AP-2 complex subunit, sigma2 subunit, 17 KD |
| YKL135C | APL2 | 7 | 3 | AP-1 complex subunit, beta1-adaptin, 82 KD |
| YLR170C | APS1 | 1 | 1 | AP-1 complex subunit, sigma1 subunit, 18 KD |
| YOL062C | APM4 | 1 | 0 | AP-2 complex subunit, mu2 subunit, 55 KD |
| YPL259C | APM1 | 2 | 1 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YPL195W | APL5 | 1 | 1 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| YPR029C | APL4 | 5 | 3 | AP-1 complex subunit, gamma-adaptin, 94 KD |
| Cluster | MI0131: |
| YAL042W | ERV46 | 2 | 0 | component of copii vesicles involved in transport between the ER and golgi complex |
| YAL007C | ERP2 | 0 | 0 | p24 protein involved in membrane trafficking |
| YAR002C-A | ERP1 | 1 | 0 | p24 protein involved in membrane trafficking |
| YDL195W | SEC31 | 4 | 4 | component of the COPII coat of ER-golgi vesicles |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YGL200C | EMP24 | 4 | 4 | component of the COPII-coated vesicles, 24 kDa |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YHR012W | VPS29 | 2 | 1 | involved in vacuolar protein sorting |
| YIL109C | SEC24 | 7 | 3 | component of COPII coat of ER-Golgi vesicles |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YJL154C | VPS35 | 5 | 4 | protein-sorting protein, vacuolar |
| YJL053W | PEP8 | 4 | 1 | vacuolar protein sorting/targeting protein |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YML012W | ERV25 | 2 | 1 | component of the COPII-coated vesicles, 25 Kda |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YOR069W | VPS5 | 3 | 2 | involved in Golgi retention and vacuolar sorting |
| YOR132W | VPS17 | 2 | 2 | vacuolar protein sorting-associated protein |
| YPL218W | SAR1 | 4 | 1 | GTP-binding protein of the ARF family |
| YPL085W | SEC16 | 3 | 2 | multidomain vesicle coat protein |
| YPL010W | RET3 | 0 | 0 | coatomer complex zeta chain |
| YPR181C | SEC23 | 9 | 4 | component of COPII coat of ER-golgi vesicles |
| Cluster | MI0132: |
| YBL050W | SEC17 | 11 | 1 | transport vesicle fusion protein |
| YBR080C | SEC18 | 1 | 1 | vesicular-fusion protein, functional homolog of NSF |
| Cluster | MI0133: |
| YAL030W | SNC1 | 4 | 2 | synaptic vesicle-associated membrane protein |
| YDR468C | TLG1 | 7 | 3 | member of the syntaxin family of t-SNAREs |
| YDR498C | SEC20 | 3 | 2 | secretory pathway protein |
| YGL212W | VAM7 | 15 | 1 | vacuolar morphogenesis protein |
| YHL031C | GOS1 | 4 | 2 | SNARE protein of Golgi compartment |
| YIL004C | BET1 | 4 | 0 | protein transport protein |
| YKL196C | YKT6 | 4 | 3 | SNARE protein for Endoplasmic Reticulum-Golgi transport |
| YLR026C | SED5 | 8 | 4 | syntaxin (T-SNARE) |
| YLR078C | BOS1 | 6 | 1 | secretory pathway protein |
| YLR093C | NYV1 | 2 | 1 | v-SNARE, vacuolar |
| YLR268W | SEC22 | 10 | 4 | synaptobrevin (V-SNARE) |
| YMR183C | SSO2 | 1 | 0 | syntaxin (T-SNARE) |
| YMR197C | VTI1 | 8 | 6 | v-SNARE: involved in Golgi retrograde protein traffic |
| YOL018C | TLG2 | 10 | 3 | member of the syntaxin family of t-SNAREs |
| YOR036W | PEP12 | 11 | 1 | syntaxin (T-SNARE), vacuolar |
| YOR075W | UFE1 | 5 | 2 | syntaxin (T-SNARE) of the ER |
| YOR106W | VAM3 | 5 | 3 | syntaxin (t-SNARE) |
| YOR327C | SNC2 | 6 | 1 | synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles |
| YPL232W | SSO1 | 2 | 1 | syntaxin-related protein |
| Cluster | MI0134: |
| YBR254C | TRS20 | 11 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR108W | GSG1 | 10 | 8 | sporulation specific protein |
| YDR246W | TRS23 | 9 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR407C | TRS120 | 9 | 9 | TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR472W | TRS31 | 9 | 9 | TRAPP subunit of 31 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YGR166W | KRE11 | 10 | 8 | beta-glucan synthesis-associated protein |
| YKR068C | BET3 | 9 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YML077W | BET5 | 10 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YMR218C | TRS130 | 9 | 9 | TRAPP subunit of 130 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YOR115C | TRS33 | 10 | 9 | TRAPP subunit of 33 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| Cluster | MI0135: |
| YKL041W | VPS24 | 1 | 1 | endosomal Vps protein complex subunit |
| YLR025W | SNF7 | 7 | 2 | class E Vps protein |
| YPR173C | VPS4 | 4 | 1 | vacuolar sorting protein |
| Cluster | MI0136: |
| YLR148W | PEP3 | 3 | 3 | vacuolar membrane protein |
| YLR396C | VPS33 | 4 | 3 | vacuolar sorting protein |
| YMR231W | PEP5 | 4 | 3 | vacuolar biogenesis protein |
| YPL045W | VPS16 | 3 | 3 | vacuolar sorting protein |
| Cluster | MI0137: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YJR065C | ARP3 | 6 | 5 | actin related protein |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| Cluster | MI0139: |
| YJR089W | BIR1 | 3 | 0 | member of the inhibitor of apoptosis family, participate in chromosome segregation events |
| Cluster | MI0140: |
| YJR060W | CBF1 | 2 | 0 | kinetochore protein |
| Cluster | MI0141: |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YGR140W | CBF2 | 2 | 0 | kinetochore protein complex CBF3, 110 KD subunit |
| YMR094W | CTF13 | 4 | 1 | kinetochore protein complex, CBF3, 58 KD subunit |
| YMR168C | CEP3 | 1 | 0 | kinetochore protein complex, 71 KD subunit |
| Cluster | MI0142: |
| YJR089W | BIR1 | 3 | 0 | member of the inhibitor of apoptosis family, participate in chromosome segregation events |
| YKL089W | MIF2 | 0 | 0 | required for normal chromosome segregation and spindle integrity |
| YKL049C | CSE4 | 0 | 0 | component of the core centromere |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| Cluster | MI0144: |
| YIL022W | TIM44 | 5 | 0 | mitochondrial inner membrane import receptor subunit |
| Cluster | MI0145: |
| YGR082W | TOM20 | 7 | 4 | mitochondrial outer membrane import receptor subunit, 20 kD |
| YHR117W | TOM71 | 1 | 0 | protein with similarity to TOM70P/Mas70p |
| YMR060C | TOM37 | 1 | 1 | mitochondrial outer membrane import receptor subunit, 37 kD |
| YMR203W | TOM40 | 8 | 6 | forms the hydrophilic channel of the mitochondrial import pore for preproteins |
| YNL131W | TOM22 | 4 | 3 | mitochondrial outer membrane import receptor complex subunit |
| YNL121C | TOM70 | 5 | 4 | mitochondrial outer membrane specialized import receptor |
| YNL070W | TOM7 | 7 | 4 | mitochondrial outer membrane import receptor subunit, 7 kD |
| YOR045W | TOM6 | 3 | 1 | mitochondrial outer membrane import receptor subunit, 6 kD |
| YPR133W-A | TOM5 | 1 | 1 | mitochondrial outer membrane protein |
| Cluster | MI0146: |
| YBR091C | MRS5 | 2 | 0 | subunit of the TIM22-complex |
| YDL217C | TIM22 | 5 | 2 | subunit of the TIM22-complex |
| YEL020W-A | TIM9 | 1 | 1 | essential subunit of the TIM22-complex for mitochondrial protein import |
| YHR005C-A | MRS11 | 3 | 2 | subunit of the TIM22-complex |
| YIL022W | TIM44 | 5 | 2 | mitochondrial inner membrane import receptor subunit |
| YJL143W | TIM17 | 3 | 2 | mitochondrial inner membrane import translocase subunit |
| YJL054W | TIM54 | 4 | 1 | translocase for the insertion of proteins into the mitochondrial inner membrane |
| YJR045C | SSC1 | 4 | 2 | mitochondrial heat shock protein 70-related protein |
| YNR017W | MAS6 | 3 | 2 | mitochondrial inner membrane import translocase subunit |
| Cluster | MI0149: |
| YBL079W | NUP170 | 1 | 1 | nuclear pore protein |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YDR192C | NUP42 | 9 | 1 | nuclear pore protein |
| YER105C | NUP157 | 4 | 0 | nuclear pore protein |
| YER107C | GLE2 | 6 | 2 | required for nuclear pore complex structure and function |
| YIL115C | NUP159 | 4 | 0 | nuclear pore protein |
| YKL068W | NUP100 | 8 | 1 | nuclear pore protein |
| YKR082W | NUP133 | 1 | 0 | nuclear pore protein |
| YLR335W | NUP2 | 6 | 0 | nuclear pore protein |
| YML103C | NUP188 | 2 | 1 | nuclear pore protein |
| YMR047C | NUP116 | 127 | 2 | nuclear pore protein |
| YMR129W | POM152 | 3 | 1 | nuclear pore membrane glycoprotein |
| YOR098C | NUP1 | 8 | 1 | nuclear pore protein |
| Cluster | MI0150: |
| YFR002W | NIC96 | 7 | 3 | nuclear pore protein |
| YGL172W | NUP49 | 9 | 3 | nuclear pore protein |
| YGR119C | NUP57 | 22 | 3 | nuclear pore protein |
| YJL041W | NSP1 | 7 | 3 | nuclear pore protein |
| Cluster | MI0151: |
| YJL061W | NUP82 | 6 | 1 | nuclear pore protein |
| YJL041W | NSP1 | 7 | 1 | nuclear pore protein |
| Cluster | MI0152: |
| YJL041W | NSP1 | 7 | 0 | nuclear pore protein |
| Cluster | MI0153: |
| YDL116W | NUP84 | 19 | 1 | nuclear pore protein |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YGL092W | NUP145 | 10 | 3 | nuclear pore protein |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YKL057C | NUP120 | 6 | 1 | nuclear pore protein |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| Cluster | MI0158: |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YER017C | AFG3 | 2 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YMR089C | YTA12 | 1 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YPR024W | YME1 | 0 | 0 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| Cluster | MI0159: |
| YMR035W | IMP2 | 1 | 0 | mitochondrial inner membrane protease subunit |
| YMR150C | IMP1 | 0 | 0 | protease, mitochondrial |
| Cluster | MI0160: |
| YHR024C | MAS2 | 0 | 0 | processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial |
| YLR163C | MAS1 | 0 | 0 | mitochondrial processing peptidase |
| Cluster | MI0166: |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| Cluster | MI0167: |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YDL017W | CDC7 | 13 | 1 | protein kinase |
| YDR052C | DBF4 | 5 | 1 | regulatory subunit for CDC7P protein kinase |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| Cluster | MI0168: |
| YBL023C | MCM2 | 4 | 0 | member of the MCM2P,MCM3P,CDC46P family |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YBR202W | CDC47 | 4 | 3 | cell division control protein |
| YEL032W | MCM3 | 2 | 2 | replication initiation protein |
| YGL201C | MCM6 | 4 | 0 | involved in replication |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YJL194W | CDC6 | 2 | 0 | cell division control protein |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YLR103C | CDC45 | 3 | 2 | required for minichromosome maintenance and initiation of chromosomal DNA replication |
| YLR274W | CDC46 | 3 | 3 | cell division control protein |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YPR019W | CDC54 | 0 | 0 | member of the CDC46P/MCM2P/MCM3P family |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| Cluster | MI0169: |
| YBL023C | MCM2 | 4 | 0 | member of the MCM2P,MCM3P,CDC46P family |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YBR202W | CDC47 | 4 | 3 | cell division control protein |
| YBR278W | DPB3 | 6 | 0 | DNA-directed DNA polymerase epsilon, subunit C |
| YDL102W | CDC2 | 2 | 2 | DNA-directed DNA polymerase delta, catalytic 125 KD subunit |
| YEL032W | MCM3 | 2 | 2 | replication initiation protein |
| YGL201C | MCM6 | 4 | 0 | involved in replication |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YJR006W | HYS2 | 3 | 2 | DNA-directed DNA polymerase delta, 55 KD subunit |
| YJR043C | POL32 | 4 | 2 | polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YLR103C | CDC45 | 3 | 2 | required for minichromosome maintenance and initiation of chromosomal DNA replication |
| YLR274W | CDC46 | 3 | 3 | cell division control protein |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YPR019W | CDC54 | 0 | 0 | member of the CDC46P/MCM2P/MCM3P family |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| Cluster | MI0170: |
| YAR007C | RFA1 | 4 | 2 | DNA replication factor A, 69 KD subunit |
| YBL035C | POL12 | 0 | 0 | DNA-directed DNA polymerase alpha, 70 KD subunit |
| YBR087W | RFC5 | 3 | 1 | DNA replication factor C, 40 KD subunit |
| YBR088C | POL30 | 1 | 1 | Proliferating Cell Nuclear Antigen (PCNA) |
| YBR278W | DPB3 | 6 | 0 | DNA-directed DNA polymerase epsilon, subunit C |
| YCR014C | POL4 | 2 | 0 | DNA polymerase |
| YDL164C | CDC9 | 1 | 0 | DNA ligase |
| YDL102W | CDC2 | 2 | 2 | DNA-directed DNA polymerase delta, catalytic 125 KD subunit |
| YER176W | ECM32 | 1 | 0 | DNA dependent ATPase/DNA helicase B |
| YHR164C | DNA2 | 1 | 1 | DNA helicase |
| YIL139C | REV7 | 1 | 0 | DNA polymerase zeta subunit |
| YIR008C | PRI1 | 1 | 0 | DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase) |
| YJL173C | RFA3 | 5 | 2 | DNA replication factor A, 13 KD subunit |
| YJR006W | HYS2 | 3 | 2 | DNA-directed DNA polymerase delta, 55 KD subunit |
| YJR043C | POL32 | 4 | 4 | polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta |
| YJR068W | RFC2 | 2 | 1 | DNA replication factor C, 41 KD subunit |
| YKL113C | RAD27 | 4 | 1 | ssDNA endonuclease and 5'-3'exonuclease |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YMR234W | RNH1 | 0 | 0 | ribonuclease H |
| YNL312W | RFA2 | 3 | 2 | DNA replication factor A, 36 kDa subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YNL102W | POL1 | 4 | 1 | DNA-directed DNA polymerase alpha, 180 KD subunit |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YOR330C | MIP1 | 0 | 0 | DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial |
| YPL167C | REV3 | 0 | 0 | DNA-directed DNA polymerase zeta subunit |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| Cluster | MI0171: |
| YIL009C-A | EST3 | 0 | 0 | required for telomerase function |
| YLR233C | EST1 | 7 | 0 | telomere elongation protein |
| YLR318W | EST2 | 0 | 0 | catalytic subunit of the telomerase |
| Cluster | MI0172: |
| YDR178W | SDH4 | 1 | 0 | succinate dehydrogenase membrane anchor subunit for SDH2P |
| YKL148C | SDH1 | 1 | 0 | succinate dehydrogenase flavoprotein precursor |
| YKL141W | SDH3 | 3 | 0 | cytochrome b560 subunit of respiratory complex II |
| YLL041C | SDH2 | 1 | 0 | succinate dehydrogenase iron-sulfur protein subunit |
| Cluster | MI0173: |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YDR529C | QCR7 | 2 | 0 | ubiquinol--cytochrome-c reductase subunit 7 |
| YEL024W | RIP1 | 2 | 0 | ubiquinol--cytochrome-c reductase iron-sulfur protein precursor |
| YFR033C | QCR6 | 1 | 0 | ubiquinol--cytochrome-c reductase 17K protein |
| YGR183C | QCR9 | 0 | 0 | ubiquinol--cytochrome-c reductase subunit 9 |
| YHR001W-A | QCR10 | 0 | 0 | ubiquinol--cytochrome-c reductase 8.5 kDa subunit |
| YJL166W | QCR8 | 2 | 0 | ubiquinol--cytochrome-c reductase chain VIII |
| YOR065W | CYT1 | 1 | 0 | cytochrome-c1 |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| Q0105 | COB | 0 | 0 | ubiquinol-cytochrome-c reductase subunit (cytochrome B) |
| Cluster | MI0174: |
| YDL067C | COX9 | 1 | 0 | cytochrome-c oxidase chain VIIA |
| YGL191W | COX13 | 0 | 0 | cytochrome-c oxidase chain VIa |
| YGL187C | COX4 | 4 | 2 | cytochrome-c oxidase chain IV |
| YHR051W | COX6 | 0 | 0 | cytochrome-c oxidase subunit VI |
| YLR038C | COX12 | 1 | 0 | cytochrome-c oxidase, subunit VIB |
| YLR395C | COX8 | 1 | 0 | cytochrome-c oxidase chain VIII |
| YMR256C | COX7 | 0 | 0 | cytochrome-c oxidase, subunit VII |
| YNL052W | COX5A | 0 | 0 | cytochrome-c oxidase chain V.A precursor |
| Q0045 | COX1 | 1 | 1 | cytochrome-c oxidase subunit I |
| Q0250 | COX2 | 1 | 0 | cytochrome-c oxidase subunit II |
| Q0275 | COX3 | 2 | 1 | cytochrome-c oxidase chain III |
| Cluster | MI0175: |
| YBL099W | ATP1 | 1 | 1 | F1F0-ATPase complex, F1 alpha subunit |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YDL181W | INH1 | 1 | 0 | inhibitor of mitochondrial ATPase |
| YDL004W | ATP16 | 0 | 0 | F1F0-ATPase complex, F1 delta subunit |
| YDR298C | ATP5 | 1 | 1 | F1F0-ATPase complex, OSCP subunit |
| YDR322C-A | TIM11 | 1 | 1 | subunit E of the dimeric form of mitochondrial F1F0-ATPase |
| YDR377W | ATP17 | 1 | 1 | ATP synthase complex, subunit f |
| YJR121W | ATP2 | 2 | 0 | F1F0-ATPase complex, F1 beta subunit |
| YKL016C | ATP7 | 0 | 0 | F1F0-ATPase complex, FO D subunit |
| YLR295C | ATP14 | 124 | 0 | F1F0-ATPase complex, subunit h |
| YML081C-A | ATP18 | 0 | 0 | gene for subunit i/j of the mitochondrial F1F0-ATP synthase |
| YOL077W-A | ATP19 | 0 | 0 | subunit K of the dimeric form of mitochondrial F1F0-ATP synthase |
| YPL271W | ATP15 | 1 | 0 | F1F0-ATPase complex, F1 epsilon subunit |
| YPL078C | ATP4 | 3 | 3 | F1F0-ATPase complex, F0 subunit B |
| YPR020W | ATP20 | 3 | 0 | subunit G of the dimeric form of mitochondrial F1F0-ATP Synthase |
| Q0080 | AAP1 | 0 | 0 | F1F0-ATPase complex, F0 subunit 8 |
| Q0085 | ATP6 | 1 | 1 | F1F0-ATPase complex, FO A subunit |
| Q0130 | OLI1 | 0 | 0 | F1F0-ATPase complex, F0 subunit 9 |
| Cluster | MI0176: |
| YGR207C | ETF-BETA | 2 | 0 | electron-transferring flavoprotein, beta chain |
| Cluster | MI0178: |
| YAL043C | PTA1 | 8 | 4 | pre-tRNA processing protein / PF I subunit |
| YDR228C | PCF11 | 9 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YDR301W | CFT1 | 7 | 4 | pre-mRNA 3'-end processing factor CF II |
| YGL044C | RNA15 | 20 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YJR093C | FIP1 | 10 | 5 | component of pre-mRNA polyadenylation factor PF I |
| YLR115W | CFT2 | 6 | 4 | cleavage and polyadenylation specificity factor, part of CF II |
| YLR277C | YSH1 | 10 | 4 | component of pre-mRNA polyadenylation factor PF I |
| YMR061W | RNA14 | 8 | 4 | component of pre-mRNA 3'-end processing factor CF I |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YOR250C | CLP1 | 1 | 1 | cleavage/polyadenylation factor IA subunit |
| Cluster | MI0179: |
| YAL033W | POP5 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBL018C | POP8 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBR167C | POP7 | 2 | 1 | nuclear RNase P subunit |
| YBR257W | POP4 | 0 | 0 | involved in processing of tRNAs and rRNAs |
| YCR035C | RRP43 | 6 | 4 | rRNA processing protein |
| YDL111C | RRP42 | 5 | 4 | rRNA processing protein |
| YDL014W | NOP1 | 3 | 2 | fibrillarin |
| YDR280W | RRP45 | 1 | 1 | rRNA processing protein |
| YGR030C | POP6 | 0 | 0 | required for processing of tRNAs and rRNAs |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YGR195W | SKI6 | 6 | 5 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YHR062C | RPP1 | 2 | 1 | required for processing of tRNA and 35S rRNA |
| YHR069C | RRP4 | 4 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YLR197W | SIK1 | 5 | 2 | involved in pre-rRNA processing |
| YNL282W | POP3 | 2 | 0 | involved in processsing of tRNAs and rRNAs |
| YNL221C | POP1 | 3 | 0 | protein component of ribonuclease P and ribonuclease MRP |
| YOL021C | DIS3 | 5 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YOR310C | NOP58 | 3 | 2 | required for pre-18S rRNA processing |
| Cluster | MI0180: |
| YAL033W | POP5 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBL018C | POP8 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBR167C | POP7 | 2 | 1 | nuclear RNase P subunit |
| YBR257W | POP4 | 0 | 0 | involved in processing of tRNAs and rRNAs |
| YGR030C | POP6 | 0 | 0 | required for processing of tRNAs and rRNAs |
| YHR062C | RPP1 | 2 | 1 | required for processing of tRNA and 35S rRNA |
| YIR015W | RPR2 | 0 | 0 | RNase P subunit |
| YNL282W | POP3 | 2 | 0 | involved in processsing of tRNAs and rRNAs |
| YNL221C | POP1 | 3 | 0 | protein component of ribonuclease P and ribonuclease MRP |
| Cluster | MI0181: |
| YDL069C | CBS1 | 0 | 0 | translational activator of COB mRNA |
| YDR197W | CBS2 | 0 | 0 | cytochrome B translational activator protein |
| YHL038C | CBP2 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein 2 |
| YJL209W | CBP1 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein |
| Cluster | MI0182: |
| YAR008W | SEN34 | 5 | 3 | tRNA splicing endonuclease gamma subunit |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YBR188C | NTC20 | 4 | 0 | splicing factor |
| YBR237W | PRP5 | 1 | 0 | pre-mRNA processing RNA-helicase |
| YCR018C | SRD1 | 0 | 0 | nucleolar protein |
| YDL048C | STP4 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YDL043C | PRP11 | 21 | 4 | pre-mRNA splicing factor |
| YDL030W | PRP9 | 18 | 2 | pre-mRNA splicing factor (snRNA-associated protein) |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YDR088C | SLU7 | 4 | 2 | pre-mRNA splicing factor affecting 3' splice site choice |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YDR364C | CDC40 | 0 | 0 | cell division control protein |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YDR463W | STP1 | 1 | 0 | pre-tRNA splicing protein, transcription factor |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| YDR478W | SNM1 | 2 | 1 | RNA binding protein of RNase MRP |
| YER013W | PRP22 | 1 | 0 | pre-mRNA splicing factor |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YER172C | BRR2 | 2 | 1 | RNA helicase-related protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YGR006W | PRP18 | 1 | 1 | U5 snRNA-associated protein |
| YGR074W | SMD1 | 10 | 2 | snRNA-associated protein |
| YGR075C | PRP38 | 2 | 1 | pre-mRNA splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YGR159C | NSR1 | 1 | 0 | nuclear localization sequence binding protein |
| YHL034C | SBP1 | 1 | 1 | single-strand nucleic acid binding protein |
| YHR006W | STP2 | 0 | 0 | involved in pre-tRNA splicing |
| YHR065C | RRP3 | 1 | 0 | required for maturation of the 35S primary transcript |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YHR165C | PRP8 | 1 | 0 | U5 snRNP protein, pre-mRNA splicing factor |
| YIL061C | SNP1 | 30 | 1 | U1 small nuclear ribonucleoprotein |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YJL087C | TRL1 | 1 | 0 | tRNA ligase |
| YKL205W | LOS1 | 2 | 1 | pre-tRNA splicing protein |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YKL074C | MUD2 | 8 | 2 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 0 | splicing factor |
| YKR086W | PRP16 | 0 | 0 | RNA-dependent ATPase |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YLR105C | SEN2 | 6 | 3 | tRNA splicing endonuclease beta subunit |
| YLR147C | SMD3 | 16 | 0 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YLR223C | IFH1 | 2 | 0 | pre-rRNA processing machinery control protein |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YLR375W | STP3 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YML046W | PRP39 | 2 | 1 | pre-mRNA splicing factor |
| YMR059W | SEN15 | 3 | 3 | tRNA splicing endonuclease delta subunit |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YMR239C | RNT1 | 1 | 0 | double-stranded ribonuclease |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YMR302C | PRP12 | 1 | 1 | involved in early maturation of pre-rRNA |
| YNL221C | POP1 | 3 | 1 | protein component of ribonuclease P and ribonuclease MRP |
| YNR011C | PRP2 | 1 | 0 | RNA-dependent ATPase of DEAH box family |
| YNR052C | POP2 | 8 | 0 | required for glucose derepression |
| YOL102C | TPT1 | 1 | 0 | tRNA 2'-phosphotransferase |
| YOR048C | RAT1 | 0 | 0 | 5'-3' exoribonuclease |
| YOR148C | SPP2 | 1 | 0 | involved in pre-mRNA processing |
| YOR159C | SME1 | 6 | 0 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPL178W | CBC2 | 3 | 1 | small subunit of the nuclear cap-binding protein complex CBC |
| YPL083C | SEN54 | 4 | 3 | tRNA splicing endonuclease alpha subunit |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YPR178W | PRP4 | 4 | 1 | U4/U6 snRNP 52 KD protein |
| Cluster | MI0183: |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YDL044C | MTF2 | 8 | 0 | mitochondrial protein involved in mRNA splicing and protein synthesis |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YGR222W | PET54 | 3 | 0 | splicing protein and translational activator, mitochondrial |
| YHR005C-A | MRS11 | 3 | 0 | subunit of the TIM22-complex |
| YIR021W | MRS1 | 1 | 0 | involved in mitochondrial RNA splicing of COB mRNA |
| YJL133W | MRS3 | 0 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YKR052C | MRS4 | 1 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YLR382C | NAM2 | 0 | 0 | leucine--tRNA ligase precursor, mitochondrial |
| YMR023C | MSS1 | 2 | 0 | mitochondrial GTPase involved in expression of COX1 |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| YOR334W | MRS2 | 2 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| YPR134W | MSS18 | 1 | 0 | splicing protein |
| Q0120 | BI4 | 0 | 0 | mRNA maturase BI4 |
| Cluster | MI0184: |
| YER165W | PAB1 | 15 | 0 | mRNA polyadenylate-binding protein |
| Cluster | MI0186: |
| YDL132W | CDC53 | 13 | 3 | controls G1/S transition |
| YDR054C | CDC34 | 7 | 3 | E2 ubiquitin-conjugating enzyme |
| YDR328C | SKP1 | 17 | 3 | kinetochore protein complex CBF3, subunit D |
| YFL009W | CDC4 | 4 | 3 | cell division control protein |
| Cluster | MI0187: |
| YDL132W | CDC53 | 13 | 3 | controls G1/S transition |
| YDR054C | CDC34 | 7 | 2 | E2 ubiquitin-conjugating enzyme |
| YDR328C | SKP1 | 17 | 3 | kinetochore protein complex CBF3, subunit D |
| YJR090C | GRR1 | 5 | 2 | required for glucose repression and for glucose and cation transport |
| Cluster | MI0188: |
| YDL132W | CDC53 | 13 | 3 | controls G1/S transition |
| YDR054C | CDC34 | 7 | 3 | E2 ubiquitin-conjugating enzyme |
| YDR328C | SKP1 | 17 | 3 | kinetochore protein complex CBF3, subunit D |
| YIL046W | MET30 | 12 | 3 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| Cluster | MI0190: |
| YDR422C | SIP1 | 7 | 2 | multicopy suppressor of SNF1 |
| YDR477W | SNF1 | 10 | 5 | carbon catabolite derepressing ser/thr protein kinase |
| YER027C | GAL83 | 3 | 2 | glucose repression protein |
| YGL208W | SIP2 | 2 | 2 | dominant suppressor of some ts mutations in RPO21 and PRP4 |
| YGL115W | SNF4 | 10 | 4 | nuclear regulatory protein |
| YJL089W | SIP4 | 1 | 1 | interacts with SNF1 protein kinase |
| Cluster | MI0191: |
| YBL016W | FUS3 | 11 | 3 | mitogen-activated protein kinase (MAP kinase) |
| YDL159W | STE7 | 6 | 3 | ser/thr/tyr protein kinase of MAP kinase kinase family |
| YDR103W | STE5 | 12 | 4 | pheromone signal transduction pathway protein |
| YGR040W | KSS1 | 7 | 3 | ser/thr protein kinase of the MAP kinase family |
| YLR362W | STE11 | 16 | 3 | ser/thr protein kinase of the MEKK family |
| Cluster | MI0192: |
| YHR005C | GPA1 | 3 | 1 | GTP-binding protein alpha subunit of the pheromone pathway |
| YJR086W | STE18 | 5 | 1 | GTP-binding protein gamma subunit of the pheromone pathway |
| YOR212W | STE4 | 12 | 2 | GTP-binding protein beta subunit of the pheromone pathway |
| Cluster | MI0194: |
| YGL061C | DUO1 | 6 | 1 | essential mitotic spindle protein |
| YGR113W | DAM1 | 13 | 1 | essential mitotic spindle pole protein |
| Cluster | MI0195: |
| YAL047C | SPC72 | 6 | 2 | STU2P Interactant |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YDR356W | NUF1 | 4 | 4 | spindle pole body component |
| YER018C | SPC25 | 1 | 1 | spindle pole body protein |
| YGL093W | SPC105 | 0 | 0 | spindle pole body protein |
| YHR172W | SPC97 | 6 | 4 | spindle pole body component |
| YKL042W | SPC42 | 1 | 1 | spindle pole body component |
| YLR212C | TUB4 | 7 | 2 | gamma tubulin |
| YMR117C | SPC24 | 20 | 1 | spindle pole body protein |
| YNL225C | CNM67 | 1 | 0 | involved in cytokinesis |
| YNL188W | KAR1 | 1 | 1 | cell division control protein |
| YNL126W | SPC98 | 5 | 4 | spindle pole body component |
| YOR257W | CDC31 | 2 | 1 | spindle pole body component, centrin |
| YOR373W | NUD1 | 0 | 0 | cell cycle regulatory protein |
| YPL255W | BBP1 | 11 | 0 | cell division control protein |
| YPL124W | NIP29 | 14 | 0 | nuclear import protein |
| Cluster | MI0196: |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YBR211C | AME1 | 4 | 0 | actin related protein |
| YCL029C | BIK1 | 3 | 1 | nuclear fusion protein |
| YDR201W | SPC19 | 6 | 2 | spindle pole body protein |
| YHR129C | ARP1 | 6 | 1 | centractin |
| YIL144W | TID3 | 17 | 2 | DMC1P interacting protein |
| YKR037C | SPC34 | 6 | 1 | spindle pole body protein |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YLR045C | STU2 | 3 | 1 | suppressor of a cs tubulin mutation |
| YMR065W | KAR5 | 1 | 0 | nuclear fusion protein |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YOL069W | NUF2 | 8 | 2 | spindle pole body protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0199: |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YDR429C | TIF35 | 6 | 2 | translation initiation factor eIF3 (p33 subunit) |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YER165W | PAB1 | 15 | 3 | mRNA polyadenylate-binding protein |
| YGL049C | TIF4632 | 3 | 2 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YGR162W | TIF4631 | 6 | 5 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YJR047C | ANB1 | 0 | 0 | translation initiation factor eIF5A.2 |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YKR059W | TIF1 | 1 | 1 | translation initiation factor 4A |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YMR146C | TIF34 | 4 | 3 | translation initiation factor eIF3, p39 subunit |
| YMR260C | TIF11 | 1 | 0 | translation initiation factor eIF1a |
| YMR309C | NIP1 | 7 | 5 | associated with 40s ribosomal subunit |
| YNL244C | SUI1 | 3 | 2 | translation initiation factor 3 (eIF3) |
| YNL062C | GCD10 | 3 | 1 | translation initiation factor eIF3 RNA-binding subunit |
| YOL139C | CDC33 | 5 | 4 | translation initiation factor eIF4E |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YOR276W | CAF20 | 3 | 2 | mRNA CAP-binding protein (eIF4F), 20K subunit |
| YOR361C | PRT1 | 7 | 7 | translation initiation factor eIF3 subunit |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YPR041W | TIF5 | 3 | 2 | translation initiation factor eIF5 |
| YPR163C | TIF3 | 5 | 0 | translation initiation factor eIF4B |
| Cluster | MI0200: |
| YAL003W | EFB1 | 3 | 3 | translation elongation factor eEF1beta |
| YBR118W | TEF2 | 2 | 2 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| YDR385W | EFT2 | 1 | 0 | translation elongation factor eEF2 |
| YKL081W | TEF4 | 1 | 1 | translation elongation factor eEF1, gamma chain |
| YKR084C | HBS1 | 1 | 0 | translation elongation factor eEF-1 alpha chain homolog |
| YLR249W | YEF3 | 3 | 2 | translation elongation factor eEF3 |
| YOR133W | EFT1 | 1 | 0 | translation elongation factor eEF2 |
| YPL048W | CAM1 | 0 | 0 | translation elongation factor eEF1 gamma homologue |
| YPR080W | TEF1 | 2 | 2 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| Cluster | MI0201: |
| YBR143C | SUP45 | 4 | 1 | translational release factor |
| YDR172W | SUP35 | 5 | 1 | eukaryotic peptide chain release factor GTP-binding subunit |
| Cluster | MI0202: |
| YBL092W | RPL32 | 2 | 0 | 60S large subunit ribosomal protein L32.e |
| YBL087C | RPL23A | 0 | 0 | 60S large subunit ribosomal protein L23.e |
| YBL072C | RPS8A | 2 | 0 | ribosomal protein S8.e |
| YBL027W | RPL19B | 1 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR031W | RPL4A | 0 | 0 | ribosomal protein |
| YBR048W | RPS11B | 0 | 0 | ribosomal protein S11.e.B |
| YBR084C-A | RPL19A | 0 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR181C | RPS6B | 0 | 0 | ribosomal protein S6.e |
| YBR189W | RPS9B | 0 | 0 | ribosomal protein S9.e.B |
| YBR191W | RPL21A | 0 | 0 | ribosomal protein L21.e |
| YCR031C | RPS14A | 0 | 0 | 40S Ribosomal protein S14.e |
| YDL191W | RPL35A | 0 | 0 | 60S large subunit ribosomal protein |
| YDL184C | RPL41A | 0 | 0 | ribosomal protein |
| YDL136W | RPL35B | 0 | 0 | 60S large subunit ribosomal protein |
| YDL133C-A | RPL41B | 0 | 0 | ribosomal protein |
| YDL130W | RPP1B | 14 | 2 | 60S large subunit acidic ribosomal protein L44prime |
| YDL083C | RPS16B | 0 | 0 | ribosomal protein S16.e |
| YDL082W | RPL13A | 0 | 0 | 60S large subunit ribosomal protein L13 |
| YDL081C | RPP1A | 8 | 1 | 60S large subunit acidic ribosomal protein a1 |
| YDL075W | RPL31A | 1 | 0 | 60S large subunit ribosomal protein L31.e |
| YDL061C | RPS29B | 1 | 0 | ribosomal protein S29.e.B |
| YDR012W | RPL4B | 1 | 0 | ribosomal protein L4.e.B |
| YDR025W | RPS11A | 2 | 0 | ribosomal protein S11.e |
| YDR064W | RPS13 | 0 | 0 | ribosomal protein |
| YDR382W | RPP2B | 4 | 2 | 60S large subunit acidic ribosomal protein |
| YDR418W | RPL12B | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YDR447C | RPS17B | 0 | 0 | ribosomal protein S17.e.B |
| YDR450W | RPS18A | 2 | 0 | ribosomal protein S18.e.c4 |
| YDR471W | RPL27B | 0 | 0 | 60S large subunit ribosomal protein |
| YDR500C | RPL37B | 1 | 0 | ribosomal protein L.37.e |
| YEL054C | RPL12A | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YER056C-A | RPL34A | 1 | 0 | ribosomal protein L34 |
| YER074W | RPS24A | 0 | 0 | 40s small subunit ribosomal protein S24.e |
| YER102W | RPS8B | 3 | 0 | ribosomal protein S8.e |
| YER117W | RPL23B | 1 | 0 | ribosomal protein L23.e |
| YER131W | RPS26B | 2 | 0 | 40S small subunit ribosomal protein S26e-c5 |
| YFL034C-A | RPL22B | 0 | 0 | ribosomal protein |
| YFR031C-A | RPL2A | 0 | 0 | ribosomal protein L8.e |
| YFR032C-A | RPL29 | 0 | 0 | 60S large subunit ribosomal protein |
| YGL189C | RPS26A | 4 | 0 | 40S small subunit ribosomal protein S26e.c7 |
| YGL147C | RPL9A | 1 | 0 | ribosomal protein L9.e |
| YGL135W | RPL1B | 2 | 0 | 60S large subunit ribosomal protein |
| YGL123W | RPS2 | 0 | 0 | 40S small subunit ribosomal protein |
| YGL103W | RPL28 | 0 | 0 | 60S large subunit ribosomal protein L27a.e |
| YGL076C | RPL7A | 0 | 0 | 60S large subunit ribosomal protein L7.e.A |
| YGL031C | RPL24A | 0 | 0 | 60S large subunit ribosomal protein L24.e.A |
| YGL030W | RPL30 | 2 | 0 | 60S large subunit ribosomal protein L30.e |
| YGR027C | RPS25A | 0 | 0 | ribosomal protein S25.e.c7 |
| YGR034W | RPL26B | 0 | 0 | 60S large subunit ribosomal protein |
| YGR085C | RPL11B | 2 | 0 | ribosomal protein |
| YGR118W | RPS23A | 1 | 1 | 40S small subunit ribosomal protein S23.e |
| YGR148C | RPL24B | 1 | 0 | 60S large subunit ribosomal protein L24.e.B |
| YGR214W | RPS0A | 1 | 0 | 40S ribosomal protein p40 homolog A |
| YHL033C | RPL8A | 1 | 0 | 60S large subunit ribosomal protein L7a.e.A |
| YHL015W | RPS20 | 2 | 0 | ribosomal protein |
| YHL001W | RPL14B | 1 | 0 | ribosomal protein |
| YHR010W | RPL27A | 0 | 0 | 60S large subunit ribosomal protein L27.e |
| YHR021C | RPS27B | 0 | 0 | ribosomal protein S27.e |
| YHR141C | RPL42B | 0 | 0 | ribosomal protein L36a.e |
| YHR203C | RPS4B | 0 | 0 | ribosomal protein S4.e.c8 |
| YIL148W | RPL40A | 0 | 0 | ubiquitin |
| YIL133C | RPL16A | 1 | 0 | 60S large subunit ribosomal protein |
| YIL069C | RPS24B | 0 | 0 | 40S small subunit ribosomal protein S24.e |
| YIL052C | RPL34B | 2 | 0 | ribosomal protein L34.e |
| YIL018W | RPL2B | 0 | 0 | 60S large subunit ribosomal protein L8.e |
| YJL191W | RPS14B | 1 | 0 | 40S small subunit ribosomal protein S14.e.B |
| YJL190C | RPS22A | 2 | 0 | ribosomal protein S15a.e.c10 |
| YJL189W | RPL39 | 1 | 0 | 60S large subunit ribosomal protein L39.e |
| YJL177W | RPL17B | 0 | 0 | 60s large subunit ribosomal protein L17.e |
| YJL136C | RPS21B | 0 | 0 | 40S small subunit ribosomal protein S21.e |
| YJR094W-A | RPL43B | 0 | 0 | 60S large subunit ribosomal protein |
| YJR123W | RPS5 | 1 | 0 | ribosomal protein S5.e |
| YJR145C | RPS4A | 2 | 0 | ribosomal protein S4.e.c10 |
| YKL180W | RPL17A | 1 | 1 | ribosomal protein L17.e |
| YKL156W | RPS27A | 0 | 0 | ribosomal protein S27.e |
| YKL006W | RPL14A | 0 | 0 | ribosomal protein |
| YKR057W | RPS21A | 0 | 0 | ribosomal protein S21.e |
| YKR094C | RPL40B | 0 | 0 | ubiquitin |
| YLL045C | RPL8B | 0 | 0 | 60s large subunit ribosomal protein L7a.e.B |
| YLR029C | RPL15A | 0 | 0 | 60s large subunit ribosomal protein L15.e.c12 |
| YLR048W | RPS0B | 0 | 0 | 40S ribosomal protein p40 homolog B |
| YLR061W | RPL22A | 0 | 0 | ribosomal protein |
| YLR075W | RPL10 | 1 | 0 | 60S large subunit ribosomal protein |
| YLR167W | RPS31 | 1 | 0 | ubiquitin/40S small subunit ribosomal protein |
| YLR185W | RPL37A | 1 | 0 | ribosomal protein L37.e |
| YLR264W | RPS28B | 7 | 0 | 40S small subunit ribosomal protein S28.e.c12 |
| YLR287C-A | RPS30A | 0 | 0 | 40S small subunit ribosomal protein |
| YLR325C | RPL38 | 3 | 0 | 60S large subunit ribosomal protein |
| YLR333C | RPS25B | 1 | 0 | ribosomal protein S25.e.c12 |
| YLR340W | RPP0 | 4 | 3 | acidic ribosomal protein L10.e |
| YLR344W | RPL26A | 1 | 0 | 60S large subunit ribosomal protein |
| YLR367W | RPS22B | 0 | 0 | ribosomal protein S15a.e.c12 |
| YLR388W | RPS29A | 1 | 0 | ribosomal protein S29.e.A |
| YLR406C | RPL31B | 1 | 0 | 60S large subunit ribosomal protein L31.e.c12 |
| YLR441C | RPS1A | 2 | 0 | ribosomal protein S3a.e |
| YLR448W | RPL6B | 1 | 0 | 60S large subunit ribosomal protein |
| YML073C | RPL6A | 0 | 0 | 60S large subunit ribosomal protein |
| YML063W | RPS1B | 0 | 0 | ribosomal protein S3a.e |
| YML026C | RPS18B | 0 | 0 | ribosomal protein S18.e.c13 |
| YML024W | RPS17A | 0 | 0 | ribosomal protein S17.e.A |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YMR121C | RPL15B | 0 | 0 | 60S large subunit ribosomal protein L15.e.c13 |
| YMR142C | RPL13B | 0 | 0 | 60S large subunit ribosomal protein |
| YMR143W | RPS16A | 0 | 0 | ribosomal protein S16.e |
| YMR194W | RPL36A | 0 | 0 | 60S large subunit ribosomal protein |
| YMR230W | RPS10B | 0 | 0 | ribosomal protein |
| YMR242C | RPL20A | 1 | 0 | 60s large subunit ribosomal protein |
| YNL302C | RPS19B | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YNL301C | RPL18B | 3 | 0 | 60S large subunit ribosomal protein L18.e |
| YNL178W | RPS3 | 2 | 0 | ribosomal protein S3.e |
| YNL162W | RPL42A | 0 | 0 | ribosomal protein L36a.e |
| YNL096C | RPS7B | 2 | 0 | strong similarity to ribosomal protein S7 (Class II) |
| YNL069C | RPL16B | 1 | 0 | 60S large subunit ribosomal protein |
| YNL067W | RPL9B | 0 | 0 | ribosomal protein L9.e.c14 |
| YOL127W | RPL25 | 1 | 0 | ribosomal protein L23a.e |
| YOL121C | RPS19A | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YOL120C | RPL18A | 0 | 0 | 60S large subunit ribosomal protein S18.e |
| YOL040C | RPS15 | 0 | 0 | 40S small subunit ribosomal protein |
| YOL039W | RPP2A | 1 | 0 | acidic ribosomal protein P2.beta |
| YOR063W | RPL3 | 0 | 0 | 60S large subunit ribosomal protein L3.e |
| YOR096W | RPS7A | 1 | 0 | ribosomal protein |
| YOR167C | RPS28A | 14 | 0 | 40S small subunit ribosomal protein S28.e.c15 |
| YOR182C | RPS30B | 0 | 0 | ribosomal protein S30 |
| YOR234C | RPL33B | 0 | 0 | ribosomal protein L35a.e.c15 |
| YOR293W | RPS10A | 0 | 0 | ribosomal protein S10.e |
| YOR312C | RPL20B | 0 | 0 | 60S large subunit ribosomal protein |
| YOR369C | RPS12 | 0 | 0 | 40S small subunit acidic ribosomal protein S12 |
| YPL249C-A | RPL36B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL220W | RPL1A | 0 | 0 | ribosomal protein |
| YPL198W | RPL7B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL143W | RPL33A | 0 | 0 | ribosomal protein L35a.e.c16 |
| YPL131W | RPL5 | 2 | 0 | 60S large subunit ribosomal protein L5.e |
| YPL090C | RPS6A | 0 | 0 | ribosomal protein S6.e |
| YPL081W | RPS9A | 0 | 0 | ribosomal protein S9.e.A |
| YPL079W | RPL21B | 0 | 0 | ribosomal protein L21 |
| YPR043W | RPL43A | 0 | 0 | ribosomal protein L37a.e |
| YPR102C | RPL11A | 0 | 0 | ribosomal protein L11.e |
| YPR132W | RPS23B | 0 | 0 | 40S small subunit ribosomal protein S23.e |
| Cluster | MI0203: |
| YBL080C | PET112 | 1 | 0 | required to maintain rho+ mitochondrial DNA |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YDL069C | CBS1 | 0 | 0 | translational activator of COB mRNA |
| YDR197W | CBS2 | 0 | 0 | cytochrome B translational activator protein |
| YER153C | PET122 | 2 | 1 | translational activator of cytochrome c oxidase subunit III |
| YGL023C | PIB2 | 1 | 1 | phosphatidylinositol 3-phosphate binding |
| YGR222W | PET54 | 3 | 2 | splicing protein and translational activator, mitochondrial |
| YLR067C | PET309 | 3 | 0 | required for stability and translation of COX1 mRNA |
| YLR203C | MSS51 | 2 | 0 | possibly involved in translational activation of COX1 and COB mRNA |
| YMR023C | MSS1 | 2 | 1 | mitochondrial GTPase involved in expression of COX1 |
| YMR064W | AEP1 | 1 | 0 | nuclear control of ATPase messenger RNA expression protein |
| YMR257C | PET111 | 0 | 0 | required for translation of COX2 mRNA |
| YMR282C | AEP2 | 0 | 0 | required for the expression of subunit-9 of atp synthase |
| YNR045W | PET494 | 1 | 1 | translational activator, mitochondrial |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| Cluster | MI0204: |
| YBL038W | MRPL16 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YBR122C | MRPL36 | 2 | 0 | ribosomal protein YmL36 precursor, mitochondrial |
| YBR146W | MRPS9 | 1 | 0 | ribosomal protein S9 precursor, mitochondrial |
| YBR251W | MRPS5 | 0 | 0 | ribosomal protein S5, mitochondrial |
| YBR268W | MRPL37 | 0 | 0 | ribosomal protein YmL37, mitochondrial |
| YBR282W | MRPL27 | 1 | 0 | ribosomal protein YmL27 precursor, mitochondrial |
| YCR003W | MRPL32 | 1 | 0 | ribosomal protein YmL32, mitochondrial |
| YCR046C | IMG1 | 1 | 0 | ribosomal protein, mitochondrial |
| YDL202W | MRPL11 | 2 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDL045W-A | MRP10 | 0 | 0 | mitochondrial ribosomal protein |
| YDR237W | MRPL7 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YDR347W | MRP1 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YDR405W | MRP20 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR462W | MRPL28 | 0 | 0 | ribosomal protein of the large subunit (YmL28), mitochondrial |
| YFR049W | YMR31 | 9 | 0 | ribosomal protein, mitochondrial |
| YGR076C | MRPL25 | 0 | 0 | ribosomal protein YmL25, mitochondrial |
| YGR084C | MRP13 | 2 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YGR220C | MRPL9 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YHL004W | MRP4 | 12 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHR075C | PPE1 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHR147C | MRPL6 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YJL096W | MRPL49 | 3 | 0 | ribosomal protein YmL49, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YKL170W | MRPL38 | 0 | 0 | ribosomal protein of the large subunit (L14), mitochondrial |
| YKL167C | MRP49 | 0 | 0 | ribosomal protein, mitochondrial |
| YKL142W | MRP8 | 6 | 0 | ribosomal protein, mitochondrial |
| YKL138C | MRPL31 | 1 | 0 | ribosomal protein YmL31, mitochondrial |
| YKL003C | MRP17 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YKR006C | MRPL13 | 1 | 0 | ribosomal protein YmL13, mitochondrial |
| YKR085C | MRPL20 | 0 | 0 | ribosomal protein YmL20, mitochondrial |
| YLR312W-A | MRPL15 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YLR439W | MRPL4 | 1 | 0 | ribosomal protein, mitochondrial |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR193W | MRPL24 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR225C | MRPL44 | 0 | 0 | ribosomal protein YMR44, mitochondrial |
| YMR286W | MRPL33 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL306W | MRPS18 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YNL284C | MRPL10 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL252C | MRPL17 | 3 | 0 | ribosomal protein of the large subunit (YmL30), mitochondrial |
| YNL185C | MRPL19 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL137C | NAM9 | 0 | 0 | ribosomal protein, mitochondrial |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YOR150W | MRPL23 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YOR158W | PET123 | 5 | 0 | ribosomal protein, mitochondrial |
| YPL173W | MRPL40 | 0 | 0 | ribosomal protein of the large subunit (YmL40), mitochondrial |
| YPR166C | MRP2 | 0 | 0 | ribosomal protein S14 |
| Q0140 | VAR1 | 0 | 0 | mitochondrial ribosomal protein |
| Cluster | MI0205: |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YDR156W | RPA14 | 2 | 1 | DNA-directed RNA polymerase I, A14 subunit |
| YHR143W-A | RPC10 | 2 | 1 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YJL148W | RPA34 | 0 | 0 | nonessential component of RNA-polI |
| YJR063W | RPA12 | 18 | 2 | DNA-directed RNA polymerase I, 13.7 KD subunit |
| YNL248C | RPA49 | 0 | 0 | DNA-directed RNA polymerase A (I) chain, 46 kDa |
| YNL113W | RPC19 | 7 | 2 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YOR340C | RPA43 | 1 | 0 | DNA-directed RNA polymerase I, 36 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YPR010C | RPA135 | 5 | 4 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| Cluster | MI0206: |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YDR311W | TFB1 | 24 | 0 | TFIIH subunit (transcription initiation factor), 75 kD |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YPL122C | TFB2 | 0 | 0 | TFIIH subunit (transcription/repair factor) |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| YPR056W | TFB4 | 1 | 0 | component of RNA polymerase transcription initiation TFIIH factor |
| Cluster | MI0208: |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YHR143W-A | RPC10 | 2 | 0 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YKL144C | RPC25 | 3 | 0 | DNA-direcred RNA polymerase III, 25 KD subunit |
| YNL151C | RPC31 | 2 | 2 | DNA-directed RNA polymerase III, 31 KD subunit |
| YNL113W | RPC19 | 7 | 1 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YNR003C | RPC34 | 4 | 2 | DNA-directed RNA polymerase III, 34 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YPR190C | RPC82 | 2 | 2 | DNA-directed RNA polymerase III, 82 KD subunit |
| Cluster | MI0209: |
| YPR186C | PZF1 | 0 | 0 | TFIIIA (transcription initiation factor) |
| Cluster | MI0210: |
| YER148W | SPT15 | 10 | 1 | the TATA-binding protein TBP |
| YGR246C | BRF1 | 3 | 1 | TFIIIB subunit, 70 kD |
| YNL039W | TFC5 | 4 | 0 | TFIIIB subunit, 90 kD |
| Cluster | MI0211: |
| YAL001C | TFC3 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 138 kD |
| YBR123C | TFC1 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 95 kD |
| YDR362C | TFC6 | 2 | 1 | TFIIIC (transcription initiation factor) subunit, 91 kD |
| YGR047C | TFC4 | 4 | 0 | TFIIIC (transcription initiation factor) subunit, 131 kD |
| YOR110W | TFC7 | 5 | 1 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| Cluster | MI0212: |
| YBL021C | HAP3 | 4 | 3 | CCAAT-binding factor subunit |
| YGL237C | HAP2 | 8 | 3 | CCAAT-binding factor subunit |
| YKL109W | HAP4 | 3 | 3 | CCAAT-binding factor subunit |
| YOR358W | HAP5 | 7 | 3 | CCAAT-binding factor subunit |
| Cluster | MI0213: |
| YGL130W | CEG1 | 2 | 1 | mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit) |
| YPL228W | CET1 | 1 | 1 | RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit) |
| Cluster | MI0214: |
| YBR114W | RAD16 | 3 | 1 | nucleotide excision repair protein |
| YCR092C | MSH3 | 3 | 3 | DNA mismatch repair protein |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YDR004W | RAD57 | 3 | 1 | DNA repair protein |
| YDR076W | RAD55 | 2 | 2 | DNA repair protein |
| YDR097C | MSH6 | 3 | 3 | DNA mismatch repair protein |
| YDR311W | TFB1 | 24 | 0 | TFIIH subunit (transcription initiation factor), 75 kD |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YEL037C | RAD23 | 6 | 1 | nucleotide excision repair protein (ubiquitin-like protein) |
| YER095W | RAD51 | 11 | 3 | DNA repair protein |
| YER162C | RAD4 | 3 | 2 | excision repair protein |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YGL163C | RAD54 | 1 | 1 | DNA-dependent ATPase of the SNF2P family |
| YGL090W | LIF1 | 4 | 1 | DNA ligase IV interacting factor |
| YGR258C | RAD2 | 0 | 0 | structure-specific nuclease of the nucleotide excision repairosome |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YJR052W | RAD7 | 2 | 2 | nucleotide excision repair protein |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YML032C | RAD52 | 5 | 1 | recombination and DNA repair protein |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| YMR167W | MLH1 | 4 | 4 | DNA mismatch repair protein |
| YMR201C | RAD14 | 1 | 0 | nucleotide excision repair protein |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YNL082W | PMS1 | 4 | 4 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 4 | DNA mismatch repair protein |
| YOR005C | DNL4 | 1 | 1 | DNA ligase IV |
| YPL122C | TFB2 | 0 | 0 | TFIIH subunit (transcription/repair factor) |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| Cluster | MI0215: |
| YAL051W | OAF1 | 1 | 1 | peroxisome proliferating transcription factor |
| YAL021C | CCR4 | 2 | 2 | transcriptional regulator |
| YBL103C | RTG3 | 1 | 1 | bHLH/zip transcription factor that regulates CIT2 gene expression |
| YBR081C | SPT7 | 13 | 13 | involved in alteration of transcription start site selection |
| YBR112C | CYC8 | 4 | 1 | general repressor of transcription |
| YBR198C | TAF90 | 16 | 13 | TFIID and SAGA subunit |
| YBR289W | SNF5 | 1 | 1 | component of SWI/SNF transcription activator complex |
| YCR084C | TUP1 | 3 | 1 | general transcription repressor |
| YCR093W | CDC39 | 4 | 3 | nuclear protein |
| YDL165W | CDC36 | 6 | 1 | transcription factor |
| YDL160C | DHH1 | 13 | 3 | putative RNA helicase of the DEAD box family |
| YDL056W | MBP1 | 1 | 1 | transcription factor, subunit of the MBF factor |
| YDR009W | GAL3 | 1 | 1 | galactokinase |
| YDR073W | SNF11 | 4 | 1 | component of SWI/SNF transcription activator complex |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YDR145W | TAF61 | 14 | 13 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 14 | TFIID and SAGA subunit |
| YDR173C | ARG82 | 0 | 0 | arginine metabolism transcription factor |
| YDR176W | NGG1 | 23 | 13 | general transcriptional adaptor or co-activator |
| YDR207C | UME6 | 8 | 2 | negative transcriptional regulator |
| YDR253C | MET32 | 0 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YDR392W | SPT3 | 14 | 13 | general transcriptional adaptor or co-activator |
| YDR397C | NCB2 | 1 | 1 | functional homolog of human NC2beta/Dr1 |
| YDR448W | ADA2 | 21 | 14 | general transcriptional adaptor or co-activator |
| YER001W | MNN1 | 0 | 0 | alpha-1,3-mannosyltransferase |
| YER068W | MOT2 | 3 | 3 | transcriptional repressor |
| YER159C | BUR6 | 2 | 1 | functional homolog of human NC2alpha |
| YFL028C | CAF16 | 1 | 1 | ATP-binding cassette transporter family member |
| YGL112C | TAF60 | 19 | 13 | TFIID and SAGA subunit |
| YGR092W | DBF2 | 7 | 4 | ser/thr protein kinase related to DBF20P |
| YGR252W | GCN5 | 16 | 13 | histone acetyltransferase |
| YHL025W | SNF6 | 2 | 0 | global transcription activator |
| YHR099W | TRA1 | 15 | 13 | component of the Ada-Spt transcriptional regulatory complex |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YIL106W | MOB1 | 9 | 4 | required for completion of mitosis and maintenance of ploidy |
| YIL038C | NOT3 | 3 | 3 | general negative regulator of transcription, subunit 3 |
| YIR017C | MET28 | 7 | 2 | transcriptional activator of sulfur amino acid metabolism |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YJR060W | CBF1 | 2 | 2 | kinetochore protein |
| YJR094C | IME1 | 3 | 1 | transcription factor required for sporulation |
| YJR122W | CAF17 | 3 | 2 | CCR4 associated factor |
| YKR036C | CAF4 | 0 | 0 | CCR4 associated factor |
| YLR055C | SPT8 | 13 | 13 | transcriptional adaptor or co-activator |
| YLR182W | SWI6 | 6 | 1 | transcription factor |
| YLR451W | LEU3 | 1 | 0 | transcription factor |
| YML099C | ARG81 | 3 | 1 | transcription factor involved in arginine metabolism |
| YML051W | GAL80 | 3 | 2 | negative regulator for expression of galactose-induced genes |
| YMR033W | ARP9 | 0 | 0 | Actin-related protein |
| YMR042W | ARG80 | 2 | 1 | transcription factor involved in arginine metabolism |
| YMR043W | MCM1 | 6 | 0 | transcription factor of the MADS box family |
| YMR053C | STB2 | 2 | 1 | SIN3P binding protein |
| YMR236W | TAF17 | 20 | 13 | TFIID and SAGA subunit |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| YNL309W | STB1 | 2 | 1 | SIN3P binding protein |
| YNL199C | GCR2 | 3 | 0 | glycolytic genes transcriptional activator |
| YNL103W | MET4 | 3 | 2 | transcriptional activator of sulfur metabolism |
| YNR023W | SNF12 | 0 | 0 | component of SWI/SNF global transcription activator complex |
| YNR052C | POP2 | 8 | 4 | required for glucose derepression |
| YOL148C | SPT20 | 15 | 13 | member of the TBP class of SPT proteins that alter transcription site selection |
| YOL067C | RTG1 | 1 | 1 | basic helix-loop-helix transcription factor that regulates CIT2 gene expression |
| YOL004W | SIN3 | 8 | 4 | transcription regulatory protein |
| YOR290C | SNF2 | 3 | 2 | component of SWI/SNF global transcription activator complex |
| YOR363C | PIP2 | 1 | 1 | peroxisome proliferating transcription factor |
| YPL254W | HFI1 | 13 | 13 | transcriptional coactivator |
| YPL248C | GAL4 | 2 | 1 | transcription factor |
| YPL129W | ANC1 | 2 | 2 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YPL075W | GCR1 | 1 | 0 | transcriptional activator |
| YPL038W | MET31 | 1 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| YPR034W | ARP7 | 0 | 0 | component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex |
| YPR072W | NOT5 | 4 | 3 | component of the NOT protein complex |
| Cluster | MI0216: |
| YBL014C | RRN6 | 4 | 2 | RNA polymerase I specific transcription initiation factor |
| YER148W | SPT15 | 10 | 0 | the TATA-binding protein TBP |
| YJL025W | RRN7 | 2 | 2 | polymerase I specific transcription initiation factor |
| YML043C | RRN11 | 3 | 2 | RNA polymerase I specific transcription initiation factor |
| Cluster | MI0217: |
| YBL025W | RRN10 | 5 | 1 | RNA polymerase I-specific transcription initiation factor |
| YLR141W | RRN5 | 2 | 0 | RNA polymerase I specific transcription initiation factor |
| YMR270C | RRN9 | 2 | 1 | RNA polymerase I specific transcription initiation factor |
| Cluster | MI0218: |
| YBL093C | ROX3 | 0 | 0 | transcription factor |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YBR193C | MED8 | 13 | 8 | transcriptional regulation mediator |
| YBR253W | SRB6 | 1 | 1 | DNA-directed RNA polymerase II suppressor protein |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YDL005C | MED2 | 7 | 6 | transcriptional regulation mediator |
| YDR308C | SRB7 | 4 | 2 | DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit |
| YDR404C | RPB7 | 2 | 1 | DNA-directed RNA polymerase II, 19 KD subunit |
| YER022W | SRB4 | 101 | 7 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YER179W | DMC1 | 15 | 0 | meiosis-specific protein |
| YGL151W | NUT1 | 0 | 0 | negative transcription regulator from artifical reporters |
| YGL070C | RPB9 | 44 | 0 | DNA-directed RNA polymerase II, 14.2 KD subunit |
| YGL025C | PGD1 | 8 | 6 | mediator complex subunit |
| YGR104C | SRB5 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YHR041C | SRB2 | 18 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YHR058C | MED6 | 6 | 1 | RNA polymerase II transcriptional regulation mediator |
| YHR143W-A | RPC10 | 2 | 0 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YIL021W | RPB3 | 8 | 7 | DNA-directed RNA-polymerase II, 45 kDa |
| YJL140W | RPB4 | 4 | 1 | DNA-directed RNA polymerase II, 32 kDa subunit |
| YLR071C | RGR1 | 2 | 1 | DNA-directed RNA polymerase II holoenzyme subunit |
| YLR418C | CDC73 | 1 | 0 | DNA-directed RNA polymerase II accessory protein |
| YMR112C | MED11 | 3 | 2 | mediator complex subunit |
| YNL236W | SIN4 | 12 | 2 | global regulator protein |
| YNR010W | CSE2 | 2 | 1 | subunit of RNA polymerase II mediator complex |
| YOL135C | MED7 | 9 | 7 | member of RNA Polymerase II transcriptional regulation mediator complex |
| YOL051W | GAL11 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YOL005C | RPB11 | 1 | 1 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YOR151C | RPB2 | 2 | 1 | DNA-directed RNA polymerase II, 140 kDa chain |
| YOR174W | MED4 | 11 | 8 | transcription regulation mediator |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL086C | ELP3 | 0 | 0 | subunit of elongator/RNAPII holoenzyme with histone acetylase activity |
| YPR168W | NUT2 | 3 | 0 | negative transcription regulator from artifical reporters |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| Cluster | MI0219: |
| YKL058W | TOA2 | 4 | 1 | TFIIA subunit (transcription initiation factor), 13.5 kD |
| YOR194C | TOA1 | 5 | 1 | TFIIA subunit (transcription initiation factor), 32 kD |
| Cluster | MI0220: |
| YPR086W | SUA7 | 100 | 0 | TFIIB subunit (transcription initiation factor), factor E |
| Cluster | MI0221: |
| YBR198C | TAF90 | 16 | 4 | TFIID and SAGA subunit |
| YCR042C | TSM1 | 1 | 1 | component of TFIID complex |
| YDR145W | TAF61 | 14 | 4 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 10 | TFIID and SAGA subunit |
| YER148W | SPT15 | 10 | 2 | the TATA-binding protein TBP |
| YGL112C | TAF60 | 19 | 4 | TFIID and SAGA subunit |
| YGR274C | TAF145 | 2 | 2 | TFIID subunit (TBP-associated factor), 145 kD |
| YML098W | TAF19 | 4 | 2 | TFIID subunit (TBP-associated factor), 19 kD |
| YML015C | TAF40 | 5 | 2 | TFIID subunit (TBP-associated factor), 40KD |
| YMR227C | TAF67 | 0 | 0 | TFIID subunit (TBP-associated factor), 67 kD |
| YMR236W | TAF17 | 20 | 4 | TFIID and SAGA subunit |
| YPL129W | ANC1 | 2 | 1 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL011C | TAF47 | 2 | 0 | component of the TBP-associated protein complex |
| Cluster | MI0222: |
| YKL028W | TFA1 | 3 | 1 | TFIIE subunit (transcription initiation factor), 66 kD |
| YKR062W | TFA2 | 1 | 1 | TFIIE subunit (transcription initiation factor), 43 KD |
| Cluster | MI0223: |
| YGR005C | TFG2 | 2 | 0 | TFIIF subunit (transcription initiation factor), 54 kD |
| YGR186W | TFG1 | 0 | 0 | TFIIF subunit (transcription initiation factor), 105 kD |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| Cluster | MI0224: |
| YBR171W | SEC66 | 3 | 0 | ER protein-translocation complex subunit |
| YDR086C | SSS1 | 1 | 1 | ER protein-translocase complex subunit |
| YER019C-A | SBH2 | 2 | 0 | ER protein-translocation complex subunit |
| 0 | 0 |
| YJL034W | KAR2 | 2 | 1 | nuclear fusion protein |
| YLR292C | SEC72 | 1 | 0 | ER protein-translocation complex subunit |
| YLR378C | SEC61 | 2 | 1 | ER protein-translocation complex subunit |
| YOR254C | SEC63 | 1 | 1 | ER protein-translocation complex subunit |
| YPL094C | SEC62 | 3 | 0 | ER protein-translocation complex subunit |
| Cluster | MI0225: |
| YDL232W | OST4 | 0 | 0 | oligosaccharyltransferase subunit |
| YEL002C | WBP1 | 2 | 2 | oligosaccharyl transferase beta subunit precursor |
| YGL226C-A | OST5 | 0 | 0 | subunit of N-oligosaccharyltransferase, zeta subunit |
| YGL022W | STT3 | 3 | 3 | oligosaccharyl transferase subunit |
| YJL002C | OST1 | 2 | 1 | oligosaccharyltransferase, alpha subunit |
| YML019W | OST6 | 1 | 0 | N-oligosaccharyltransferase complex subunit |
| YMR149W | SWP1 | 4 | 2 | oligosaccharyltransferase delta subunit |
| YOR085W | OST3 | 0 | 0 | oligosaccharyltransferase gamma subunit |
| YOR103C | OST2 | 0 | 0 | oligosaccharyltransferase epsilon subunit |
| Cluster | MI0226: |
| YIR022W | SEC11 | 2 | 1 | signal sequence processing protein |
| YJR010C-A | SPC1 | 3 | 1 | signal peptidase 10.8 kDa subunit |
| YML055W | SPC2 | 4 | 0 | signal peptidase 18 KD subunit |
| Cluster | MI0227: |
| YDL092W | SRP14 | 1 | 1 | signal recognition particle subunit |
| YKL122C | SRP21 | 1 | 1 | signal recognition particle subunit |
| YML105C | SEC65 | 3 | 1 | signal recognition particle subunit |
| YPL243W | SRP68 | 0 | 0 | signal recognition particle protein |
| YPL210C | SRP72 | 0 | 0 | signal recognition particle protein |
| YPR088C | SRP54 | 2 | 1 | signal recognition particle subunit |
| Cluster | MI0228: |
| YDR292C | SRP101 | 2 | 1 | signal recognition particle receptor, alpha chain |
| YKL154W | SRP102 | 2 | 1 | signal recognition particle receptor, beta chain |
| Cluster | MI0257: |
| YML104C | MDM1 | 2 | 0 | intermediate filament protein |
| Cluster | MI0258: |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YDL225W | SHS1 | 5 | 4 | septin |
| YDR218C | SPR28 | 2 | 2 | septin-related sporulation protein |
| YGR059W | SPR3 | 1 | 1 | sporulation-specific septin |
| YHR107C | CDC12 | 9 | 4 | septin |
| YJR076C | CDC11 | 6 | 5 | septin |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| Cluster | MI0259: |
| YFL039C | ACT1 | 22 | 0 | actin |
| Cluster | MI0260: |
| YBL007C | SLA1 | 2 | 1 | cytoskeleton assembly control protein |
| YBR200W | BEM1 | 10 | 1 | bud emergence mediator |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YCL040W | GLK1 | 6 | 0 | aldohexose specific glucokinase |
| YCR088W | ABP1 | 4 | 2 | actin-binding protein |
| YDL178W | AIP2 | 2 | 1 | actin interacting protein 2 |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR129C | SAC6 | 1 | 0 | actin filament bundling protein, fimbrin |
| YDR388W | RVS167 | 9 | 2 | reduced viability upon starvation protein |
| YGR080W | TWF1 | 2 | 0 | twinfilin, an actin monomer sequestering protein |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YIL138C | TPM2 | 1 | 0 | tropomyosin, isoform 2 |
| YIL034C | CAP2 | 16 | 0 | F-actin capping protein, beta subunit |
| YIR006C | PAN1 | 8 | 0 | actin-cytoskeleton assembly protein |
| YKL007W | CAP1 | 2 | 0 | F-actin capping protein alpha subunit |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YLR319C | BUD6 | 9 | 0 | bud site selection protein |
| YLR337C | VRP1 | 1 | 1 | verprolin |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| YMR092C | AIP1 | 4 | 0 | actin cytoskeleton component |
| YNL243W | SLA2 | 2 | 0 | cytoskeleton assembly control protein |
| YNL138W | SRV2 | 3 | 1 | adenylate cyclase-associated protein, 70kDa |
| YNL079C | TPM1 | 0 | 0 | tropomyosin 1 |
| YOR122C | PFY1 | 4 | 0 | profilin |
| YOR181W | LAS17 | 6 | 3 | component of actin cortical patches |
| Cluster | MI0261: |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YBR172C | SMY2 | 2 | 0 | kinesin-related protein |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YKL129C | MYO3 | 0 | 0 | myosin type I |
| YKL079W | SMY1 | 2 | 0 | kinesin-related protein |
| YMR109W | MYO5 | 1 | 0 | myosin I |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| Cluster | MI0262: |
| YFL037W | TUB2 | 4 | 1 | beta-tubulin |
| YLR212C | TUB4 | 7 | 0 | gamma tubulin |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| YML085C | TUB1 | 5 | 1 | alpha-1 tubulin |
| Cluster | MI0263: |
| YBL078C | AUT7 | 4 | 1 | essential for autophagy |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YCL029C | BIK1 | 3 | 2 | nuclear fusion protein |
| YER016W | BIM1 | 4 | 1 | binding to microtubules |
| YJL042W | MHP1 | 2 | 0 | microtubule-associated protein |
| YLR045C | STU2 | 3 | 1 | suppressor of a cs tubulin mutation |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YMR138W | CIN4 | 3 | 0 | GTP-binding protein |
| YNL223W | AUT2 | 3 | 1 | essential for autophagy |
| YNL126W | SPC98 | 5 | 0 | spindle pole body component |
| YOR058C | ASE1 | 0 | 0 | microtubule-associated protein (nonmotor) |
| YOR265W | RBL2 | 3 | 0 | beta-tubulin binding protein |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YPL241C | CIN2 | 2 | 0 | involved in chromosome segregation |
| Cluster | MI0264: |
| YBL063W | KIP1 | 1 | 0 | kinesin-related protein |
| YDR424C | DYN2 | 0 | 0 | dynein light chain 1, cytosolic |
| YDR488C | PAC11 | 2 | 1 | required in the absence of CIN8P |
| YEL061C | CIN8 | 2 | 0 | kinesin-related protein |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| YGL005C | 2 | 0 | weak similarity to Xenopus kinesin-related protein Eg5 (Class III) |
| YHR129C | ARP1 | 6 | 2 | centractin |
| YHR156C | 3 | 0 | weak similarity to mouse kinesin KIF3B (Class III) |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YPL174C | NIP100 | 8 | 3 | component of the dynactin complex |
| YPL155C | KIP2 | 1 | 0 | kinesin-related protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0283: |
| YDR176W | NGG1 | 23 | 4 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 4 | general transcriptional adaptor or co-activator |
| YGR252W | GCN5 | 16 | 4 | histone acetyltransferase |
| YOL148C | SPT20 | 15 | 4 | member of the TBP class of SPT proteins that alter transcription site selection |
| YPL254W | HFI1 | 13 | 4 | transcriptional coactivator |
| Cluster | MI0284: |
| YBR081C | SPT7 | 13 | 12 | involved in alteration of transcription start site selection |
| YBR198C | TAF90 | 16 | 12 | TFIID and SAGA subunit |
| YDR145W | TAF61 | 14 | 12 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 12 | TFIID and SAGA subunit |
| YDR176W | NGG1 | 23 | 12 | general transcriptional adaptor or co-activator |
| YDR392W | SPT3 | 14 | 12 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 12 | general transcriptional adaptor or co-activator |
| YGL112C | TAF60 | 19 | 12 | TFIID and SAGA subunit |
| YGR252W | GCN5 | 16 | 12 | histone acetyltransferase |
| YHR099W | TRA1 | 15 | 12 | component of the Ada-Spt transcriptional regulatory complex |
| YLR055C | SPT8 | 13 | 12 | transcriptional adaptor or co-activator |
| YMR236W | TAF17 | 20 | 12 | TFIID and SAGA subunit |
| YOL148C | SPT20 | 15 | 12 | member of the TBP class of SPT proteins that alter transcription site selection |
| Cluster | MI0285: |
| YHR099W | TRA1 | 15 | 0 | component of the Ada-Spt transcriptional regulatory complex |
| YOR244W | ESA1 | 2 | 0 | histone acetyltransferase |
| Cluster | MI0293: |
| YKL135C | APL2 | 7 | 2 | AP-1 complex subunit, beta1-adaptin, 82 KD |
| YLR170C | APS1 | 1 | 1 | AP-1 complex subunit, sigma1 subunit, 18 KD |
| YPL259C | APM1 | 2 | 1 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YPR029C | APL4 | 5 | 2 | AP-1 complex subunit, gamma-adaptin, 94 KD |
| Cluster | MI0294: |
| YBL037W | APL3 | 0 | 0 | AP-2 complex subunit, alpha-adaptin, 113 KD |
| YJR005W | APL1 | 3 | 0 | AP-2 complex subunit, beta2-adaptin, 78 KD |
| YJR058C | APS2 | 2 | 0 | AP-2 complex subunit, sigma2 subunit, 17 KD |
| YOL062C | APM4 | 1 | 0 | AP-2 complex subunit, mu2 subunit, 55 KD |
| Cluster | MI0295: |
| YBR288C | APM3 | 2 | 1 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YGR261C | APL6 | 1 | 1 | AP-3 complex subunit, beta3-adaptin, 91 KD |
| YJL024C | APS3 | 1 | 1 | AP-3 complex subunit, sigma3 subunit, 22 KD |
| YPL195W | APL5 | 1 | 1 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| Cluster | MI0296: |
| YHL019C | APM2 | 4 | 0 | involved in clathrin-independent transport processes |
| Cluster | MI0297: |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YPL010W | RET3 | 0 | 0 | coatomer complex zeta chain |
| Cluster | MI0298: |
| YAL042W | ERV46 | 2 | 0 | component of copii vesicles involved in transport between the ER and golgi complex |
| YAL007C | ERP2 | 0 | 0 | p24 protein involved in membrane trafficking |
| YAR002C-A | ERP1 | 1 | 0 | p24 protein involved in membrane trafficking |
| YDL195W | SEC31 | 4 | 4 | component of the COPII coat of ER-golgi vesicles |
| YGL200C | EMP24 | 4 | 4 | component of the COPII-coated vesicles, 24 kDa |
| YIL109C | SEC24 | 7 | 3 | component of COPII coat of ER-Golgi vesicles |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YML012W | ERV25 | 2 | 1 | component of the COPII-coated vesicles, 25 Kda |
| YPL218W | SAR1 | 4 | 1 | GTP-binding protein of the ARF family |
| YPL085W | SEC16 | 3 | 2 | multidomain vesicle coat protein |
| YPR181C | SEC23 | 9 | 4 | component of COPII coat of ER-golgi vesicles |
| Cluster | MI0299: |
| YHR012W | VPS29 | 2 | 1 | involved in vacuolar protein sorting |
| YJL154C | VPS35 | 5 | 4 | protein-sorting protein, vacuolar |
| YJL053W | PEP8 | 4 | 1 | vacuolar protein sorting/targeting protein |
| YOR069W | VPS5 | 3 | 2 | involved in Golgi retention and vacuolar sorting |
| YOR132W | VPS17 | 2 | 2 | vacuolar protein sorting-associated protein |
| Cluster | MI0300: |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| Cluster | MI0302: |
| YKL196C | YKT6 | 4 | 0 | SNARE protein for Endoplasmic Reticulum-Golgi transport |
| YLR093C | NYV1 | 2 | 0 | v-SNARE, vacuolar |
| Cluster | MI0303: |
| YDR468C | TLG1 | 7 | 1 | member of the syntaxin family of t-SNAREs |
| YDR498C | SEC20 | 3 | 1 | secretory pathway protein |
| YGL212W | VAM7 | 15 | 1 | vacuolar morphogenesis protein |
| YLR026C | SED5 | 8 | 0 | syntaxin (T-SNARE) |
| YMR183C | SSO2 | 1 | 0 | syntaxin (T-SNARE) |
| YOL018C | TLG2 | 10 | 1 | member of the syntaxin family of t-SNAREs |
| YOR036W | PEP12 | 11 | 0 | syntaxin (T-SNARE), vacuolar |
| YOR075W | UFE1 | 5 | 1 | syntaxin (T-SNARE) of the ER |
| YOR106W | VAM3 | 5 | 1 | syntaxin (t-SNARE) |
| YPL232W | SSO1 | 2 | 0 | syntaxin-related protein |
| Cluster | MI0304: |
| YAL030W | SNC1 | 4 | 0 | synaptic vesicle-associated membrane protein |
| YHL031C | GOS1 | 4 | 0 | SNARE protein of Golgi compartment |
| YIL004C | BET1 | 4 | 0 | protein transport protein |
| YLR078C | BOS1 | 6 | 1 | secretory pathway protein |
| YLR093C | NYV1 | 2 | 0 | v-SNARE, vacuolar |
| YLR268W | SEC22 | 10 | 1 | synaptobrevin (V-SNARE) |
| YMR197C | VTI1 | 8 | 0 | v-SNARE: involved in Golgi retrograde protein traffic |
| YOR327C | SNC2 | 6 | 0 | synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles |
| Cluster | MI0317: |
| YIL022W | TIM44 | 5 | 1 | mitochondrial inner membrane import receptor subunit |
| YJR045C | SSC1 | 4 | 1 | mitochondrial heat shock protein 70-related protein |
| Cluster | MI0318: |
| YBR091C | MRS5 | 2 | 0 | subunit of the TIM22-complex |
| YDL217C | TIM22 | 5 | 2 | subunit of the TIM22-complex |
| YEL020W-A | TIM9 | 1 | 1 | essential subunit of the TIM22-complex for mitochondrial protein import |
| YHR005C-A | MRS11 | 3 | 2 | subunit of the TIM22-complex |
| YJL054W | TIM54 | 4 | 1 | translocase for the insertion of proteins into the mitochondrial inner membrane |
| Cluster | MI0319: |
| YJL143W | TIM17 | 3 | 1 | mitochondrial inner membrane import translocase subunit |
| YNR017W | MAS6 | 3 | 1 | mitochondrial inner membrane import translocase subunit |
| Cluster | MI0320: |
| YEL020W-A | TIM9 | 1 | 1 | essential subunit of the TIM22-complex for mitochondrial protein import |
| YHR005C-A | MRS11 | 3 | 1 | subunit of the TIM22-complex |
| Cluster | MI0332: |
| YER017C | AFG3 | 2 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YMR089C | YTA12 | 1 | 1 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| Cluster | MI0333: |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| Cluster | MI0334: |
| YPR024W | YME1 | 0 | 0 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| Cluster | MI0337: |
| YDL020C | RPN4 | 0 | 0 | 26S proteasome subunit |
| YDR069C | DOA4 | 2 | 0 | ubiquitin-specific protease |
| YGR270W | YTA7 | 0 | 0 | 26S proteasome subunit |
| Cluster | MI0338: |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YBR173C | UMP1 | 1 | 0 | proteasome maturation factor |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YER094C | PUP3 | 2 | 1 | 20S proteasome subunit (beta3) |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YGR253C | PUP2 | 2 | 0 | 20S proteasome subunit(alpha5) |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YOR157C | PUP1 | 4 | 1 | 20S proteasome subunit (beta2) |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| Cluster | MI0339: |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 3 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 1 | 26S proteasome regulatory subunit |
| YGR232W | NAS6 | 3 | 1 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| YIL075C | RPN2 | 1 | 0 | 26S proteasome regulatory subunit |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YOR259C | RPT4 | 3 | 3 | 26S proteasome regulatory subunit |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| Cluster | MI0348: |
| YBR088C | POL30 | 1 | 0 | Proliferating Cell Nuclear Antigen (PCNA) |
| Cluster | MI0349: |
| YBR278W | DPB3 | 6 | 0 | DNA-directed DNA polymerase epsilon, subunit C |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| Cluster | MI0350: |
| YIL139C | REV7 | 1 | 0 | DNA polymerase zeta subunit |
| YPL167C | REV3 | 0 | 0 | DNA-directed DNA polymerase zeta subunit |
| Cluster | MI0351: |
| YKL113C | RAD27 | 4 | 0 | ssDNA endonuclease and 5'-3'exonuclease |
| Cluster | MI0352: |
| YMR234W | RNH1 | 0 | 0 | ribonuclease H |
| Cluster | MI0353: |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| Cluster | MI0354: |
| YAR007C | RFA1 | 4 | 2 | DNA replication factor A, 69 KD subunit |
| YJL173C | RFA3 | 5 | 2 | DNA replication factor A, 13 KD subunit |
| YNL312W | RFA2 | 3 | 2 | DNA replication factor A, 36 kDa subunit |
| Cluster | MI0355: |
| YBR087W | RFC5 | 3 | 1 | DNA replication factor C, 40 KD subunit |
| YJR068W | RFC2 | 2 | 1 | DNA replication factor C, 41 KD subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| Cluster | MI0356: |
| YER176W | ECM32 | 1 | 0 | DNA dependent ATPase/DNA helicase B |
| YHR164C | DNA2 | 1 | 0 | DNA helicase |
| Cluster | MI0357: |
| YDL164C | CDC9 | 1 | 0 | DNA ligase |
| Cluster | MI0358: |
| YBL035C | POL12 | 0 | 0 | DNA-directed DNA polymerase alpha, 70 KD subunit |
| YIR008C | PRI1 | 1 | 0 | DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase) |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YNL102W | POL1 | 4 | 0 | DNA-directed DNA polymerase alpha, 180 KD subunit |
| Cluster | MI0359: |
| YCR014C | POL4 | 2 | 0 | DNA polymerase |
| Cluster | MI0360: |
| YOR330C | MIP1 | 0 | 0 | DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial |
| Cluster | MI0361: |
| YDL102W | CDC2 | 2 | 2 | DNA-directed DNA polymerase delta, catalytic 125 KD subunit |
| YJR006W | HYS2 | 3 | 2 | DNA-directed DNA polymerase delta, 55 KD subunit |
| YJR043C | POL32 | 4 | 2 | polymerase-associated gene, third (55 kDa) subunit of DNA polymerase delta |
| Cluster | MI0369: |
| YDR228C | PCF11 | 9 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YGL044C | RNA15 | 20 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YMR061W | RNA14 | 8 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YOR250C | CLP1 | 1 | 1 | cleavage/polyadenylation factor IA subunit |
| Cluster | MI0370: |
| YDR301W | CFT1 | 7 | 2 | pre-mRNA 3'-end processing factor CF II |
| YLR115W | CFT2 | 6 | 2 | cleavage and polyadenylation specificity factor, part of CF II |
| YLR277C | YSH1 | 10 | 2 | component of pre-mRNA polyadenylation factor PF I |
| Cluster | MI0371: |
| YAL043C | PTA1 | 8 | 2 | pre-tRNA processing protein / PF I subunit |
| YJR093C | FIP1 | 10 | 2 | component of pre-mRNA polyadenylation factor PF I |
| YLR277C | YSH1 | 10 | 2 | component of pre-mRNA polyadenylation factor PF I |
| Cluster | MI0372: |
| YCR035C | RRP43 | 6 | 4 | rRNA processing protein |
| YDL111C | RRP42 | 5 | 4 | rRNA processing protein |
| YDR280W | RRP45 | 1 | 1 | rRNA processing protein |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YGR195W | SKI6 | 6 | 5 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YHR069C | RRP4 | 4 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YOL021C | DIS3 | 5 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| Cluster | MI0373: |
| YAL033W | POP5 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBL018C | POP8 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YBR167C | POP7 | 2 | 1 | nuclear RNase P subunit |
| YBR257W | POP4 | 0 | 0 | involved in processing of tRNAs and rRNAs |
| YGR030C | POP6 | 0 | 0 | required for processing of tRNAs and rRNAs |
| YHR062C | RPP1 | 2 | 1 | required for processing of tRNA and 35S rRNA |
| YNL282W | POP3 | 2 | 0 | involved in processsing of tRNAs and rRNAs |
| YNL221C | POP1 | 3 | 0 | protein component of ribonuclease P and ribonuclease MRP |
| Cluster | MI0374: |
| YDL014W | NOP1 | 3 | 2 | fibrillarin |
| YLR197W | SIK1 | 5 | 2 | involved in pre-rRNA processing |
| YOR310C | NOP58 | 3 | 2 | required for pre-18S rRNA processing |
| Cluster | MI0377: |
| YBR188C | NTC20 | 4 | 0 | splicing factor |
| YDR473C | PRP3 | 3 | 0 | essential splicing factor |
| Cluster | MI0378: |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YBR237W | PRP5 | 1 | 0 | pre-mRNA processing RNA-helicase |
| YDL043C | PRP11 | 21 | 3 | pre-mRNA splicing factor |
| YDL030W | PRP9 | 18 | 2 | pre-mRNA splicing factor (snRNA-associated protein) |
| YDR088C | SLU7 | 4 | 2 | pre-mRNA splicing factor affecting 3' splice site choice |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YDR364C | CDC40 | 0 | 0 | cell division control protein |
| YER013W | PRP22 | 1 | 0 | pre-mRNA splicing factor |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YER172C | BRR2 | 2 | 1 | RNA helicase-related protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YGR006W | PRP18 | 1 | 1 | U5 snRNA-associated protein |
| YGR074W | SMD1 | 10 | 1 | snRNA-associated protein |
| YGR075C | PRP38 | 2 | 1 | pre-mRNA splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YHR165C | PRP8 | 1 | 0 | U5 snRNP protein, pre-mRNA splicing factor |
| YIL061C | SNP1 | 30 | 1 | U1 small nuclear ribonucleoprotein |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YKL074C | MUD2 | 8 | 2 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 0 | splicing factor |
| YKR086W | PRP16 | 0 | 0 | RNA-dependent ATPase |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YLR147C | SMD3 | 16 | 0 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YML046W | PRP39 | 2 | 1 | pre-mRNA splicing factor |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YNR011C | PRP2 | 1 | 0 | RNA-dependent ATPase of DEAH box family |
| YOR148C | SPP2 | 1 | 0 | involved in pre-mRNA processing |
| YOR159C | SME1 | 6 | 0 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPL178W | CBC2 | 3 | 1 | small subunit of the nuclear cap-binding protein complex CBC |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YPR178W | PRP4 | 4 | 0 | U4/U6 snRNP 52 KD protein |
| Cluster | MI0379: |
| YCR018C | SRD1 | 0 | 0 | nucleolar protein |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YDR478W | SNM1 | 2 | 1 | RNA binding protein of RNase MRP |
| YGR159C | NSR1 | 1 | 0 | nuclear localization sequence binding protein |
| YHL034C | SBP1 | 1 | 1 | single-strand nucleic acid binding protein |
| YHR065C | RRP3 | 1 | 0 | required for maturation of the 35S primary transcript |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YLR223C | IFH1 | 2 | 0 | pre-rRNA processing machinery control protein |
| YMR239C | RNT1 | 1 | 0 | double-stranded ribonuclease |
| YMR302C | PRP12 | 1 | 0 | involved in early maturation of pre-rRNA |
| YNL221C | POP1 | 3 | 1 | protein component of ribonuclease P and ribonuclease MRP |
| YNR052C | POP2 | 8 | 0 | required for glucose derepression |
| YOR048C | RAT1 | 0 | 0 | 5'-3' exoribonuclease |
| Cluster | MI0380: |
| YAR008W | SEN34 | 5 | 3 | tRNA splicing endonuclease gamma subunit |
| YDL048C | STP4 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YDR463W | STP1 | 1 | 0 | pre-tRNA splicing protein, transcription factor |
| YHR006W | STP2 | 0 | 0 | involved in pre-tRNA splicing |
| YJL087C | TRL1 | 1 | 0 | tRNA ligase |
| YKL205W | LOS1 | 2 | 0 | pre-tRNA splicing protein |
| YLR105C | SEN2 | 6 | 3 | tRNA splicing endonuclease beta subunit |
| YLR375W | STP3 | 0 | 0 | involved in pre-tRNA splicing and in uptake of branched-chain amino acids |
| YMR059W | SEN15 | 3 | 3 | tRNA splicing endonuclease delta subunit |
| YOL102C | TPT1 | 1 | 0 | tRNA 2'-phosphotransferase |
| YPL083C | SEN54 | 4 | 3 | tRNA splicing endonuclease alpha subunit |
| Cluster | MI0381: |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YDL044C | MTF2 | 8 | 0 | mitochondrial protein involved in mRNA splicing and protein synthesis |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YGR222W | PET54 | 3 | 0 | splicing protein and translational activator, mitochondrial |
| YHR005C-A | MRS11 | 3 | 0 | subunit of the TIM22-complex |
| YIR021W | MRS1 | 1 | 0 | involved in mitochondrial RNA splicing of COB mRNA |
| YJL133W | MRS3 | 0 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YKR052C | MRS4 | 1 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YLR382C | NAM2 | 0 | 0 | leucine--tRNA ligase precursor, mitochondrial |
| YMR023C | MSS1 | 2 | 0 | mitochondrial GTPase involved in expression of COX1 |
| YOR334W | MRS2 | 2 | 0 | RNA splicing protein and member of the mitochondrial carrier family (MCF) |
| YPR134W | MSS18 | 1 | 0 | splicing protein |
| Q0120 | BI4 | 0 | 0 | mRNA maturase BI4 |
| Cluster | MI0382: |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| Cluster | MI0394: |
| YAL047C | SPC72 | 6 | 0 | STU2P Interactant |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YDR356W | NUF1 | 4 | 2 | spindle pole body component |
| YER018C | SPC25 | 1 | 1 | spindle pole body protein |
| YGL093W | SPC105 | 0 | 0 | spindle pole body protein |
| YKL042W | SPC42 | 1 | 1 | spindle pole body component |
| YMR117C | SPC24 | 20 | 1 | spindle pole body protein |
| YNL225C | CNM67 | 1 | 0 | involved in cytokinesis |
| YNL188W | KAR1 | 1 | 1 | cell division control protein |
| YOR257W | CDC31 | 2 | 1 | spindle pole body component, centrin |
| YOR373W | NUD1 | 0 | 0 | cell cycle regulatory protein |
| YPL255W | BBP1 | 11 | 0 | cell division control protein |
| YPL124W | NIP29 | 14 | 0 | nuclear import protein |
| Cluster | MI0395: |
| YHR172W | SPC97 | 6 | 2 | spindle pole body component |
| YLR212C | TUB4 | 7 | 2 | gamma tubulin |
| YNL126W | SPC98 | 5 | 2 | spindle pole body component |
| Cluster | MI0399: |
| YMR260C | TIF11 | 1 | 0 | translation initiation factor eIF1a |
| Cluster | MI0400: |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YJR047C | ANB1 | 0 | 0 | translation initiation factor eIF5A.2 |
| Cluster | MI0401: |
| YER165W | PAB1 | 15 | 2 | mRNA polyadenylate-binding protein |
| YGR162W | TIF4631 | 6 | 2 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| Cluster | MI0402: |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| Cluster | MI0403: |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| Cluster | MI0404: |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YDR429C | TIF35 | 6 | 2 | translation initiation factor eIF3 (p33 subunit) |
| YMR146C | TIF34 | 4 | 3 | translation initiation factor eIF3, p39 subunit |
| YMR309C | NIP1 | 7 | 4 | associated with 40s ribosomal subunit |
| YNL244C | SUI1 | 3 | 2 | translation initiation factor 3 (eIF3) |
| YNL062C | GCD10 | 3 | 1 | translation initiation factor eIF3 RNA-binding subunit |
| YOR361C | PRT1 | 7 | 6 | translation initiation factor eIF3 subunit |
| Cluster | MI0405: |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| Cluster | MI0406: |
| YPR163C | TIF3 | 5 | 0 | translation initiation factor eIF4B |
| Cluster | MI0407: |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| Cluster | MI0408: |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGR162W | TIF4631 | 6 | 1 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YOR276W | CAF20 | 3 | 1 | mRNA CAP-binding protein (eIF4F), 20K subunit |
| Cluster | MI0409: |
| YPR041W | TIF5 | 3 | 0 | translation initiation factor eIF5 |
| Cluster | MI0410: |
| YAL003W | EFB1 | 3 | 3 | translation elongation factor eEF1beta |
| YBR118W | TEF2 | 2 | 1 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| YKL081W | TEF4 | 1 | 1 | translation elongation factor eEF1, gamma chain |
| YKR084C | HBS1 | 1 | 0 | translation elongation factor eEF-1 alpha chain homolog |
| YPL048W | CAM1 | 0 | 0 | translation elongation factor eEF1 gamma homologue |
| YPR080W | TEF1 | 2 | 1 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| Cluster | MI0411: |
| YDR385W | EFT2 | 1 | 0 | translation elongation factor eEF2 |
| YOR133W | EFT1 | 1 | 0 | translation elongation factor eEF2 |
| Cluster | MI0412: |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| Cluster | MI0413: |
| YBR143C | SUP45 | 4 | 0 | translational release factor |
| Cluster | MI0414: |
| YDR172W | SUP35 | 5 | 0 | eukaryotic peptide chain release factor GTP-binding subunit |
| Cluster | MI0415: |
| YLR075W | RPL10 | 1 | 0 | 60S large subunit ribosomal protein |
| Cluster | MI0416: |
| YBL092W | RPL32 | 2 | 0 | 60S large subunit ribosomal protein L32.e |
| YBL087C | RPL23A | 0 | 0 | 60S large subunit ribosomal protein L23.e |
| YBL027W | RPL19B | 1 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR031W | RPL4A | 0 | 0 | ribosomal protein |
| YBR084C-A | RPL19A | 0 | 0 | 60S large subunit ribosomal protein L19.e |
| YBR191W | RPL21A | 0 | 0 | ribosomal protein L21.e |
| YDL191W | RPL35A | 0 | 0 | 60S large subunit ribosomal protein |
| YDL184C | RPL41A | 0 | 0 | ribosomal protein |
| YDL136W | RPL35B | 0 | 0 | 60S large subunit ribosomal protein |
| YDL133C-A | RPL41B | 0 | 0 | ribosomal protein |
| YDL130W | RPP1B | 14 | 2 | 60S large subunit acidic ribosomal protein L44prime |
| YDL082W | RPL13A | 0 | 0 | 60S large subunit ribosomal protein L13 |
| YDL081C | RPP1A | 8 | 1 | 60S large subunit acidic ribosomal protein a1 |
| YDL075W | RPL31A | 1 | 0 | 60S large subunit ribosomal protein L31.e |
| YDR012W | RPL4B | 1 | 0 | ribosomal protein L4.e.B |
| YDR382W | RPP2B | 4 | 2 | 60S large subunit acidic ribosomal protein |
| YDR418W | RPL12B | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YDR471W | RPL27B | 0 | 0 | 60S large subunit ribosomal protein |
| YDR500C | RPL37B | 1 | 0 | ribosomal protein L.37.e |
| YEL054C | RPL12A | 1 | 0 | 60S large subunit ribosomal protein L12.e |
| YER056C-A | RPL34A | 1 | 0 | ribosomal protein L34 |
| YER117W | RPL23B | 1 | 0 | ribosomal protein L23.e |
| YFL034C-A | RPL22B | 0 | 0 | ribosomal protein |
| YFR031C-A | RPL2A | 0 | 0 | ribosomal protein L8.e |
| YFR032C-A | RPL29 | 0 | 0 | 60S large subunit ribosomal protein |
| YGL147C | RPL9A | 1 | 0 | ribosomal protein L9.e |
| YGL135W | RPL1B | 2 | 0 | 60S large subunit ribosomal protein |
| YGL103W | RPL28 | 0 | 0 | 60S large subunit ribosomal protein L27a.e |
| YGL076C | RPL7A | 0 | 0 | 60S large subunit ribosomal protein L7.e.A |
| YGL031C | RPL24A | 0 | 0 | 60S large subunit ribosomal protein L24.e.A |
| YGL030W | RPL30 | 2 | 0 | 60S large subunit ribosomal protein L30.e |
| YGR034W | RPL26B | 0 | 0 | 60S large subunit ribosomal protein |
| YGR085C | RPL11B | 2 | 0 | ribosomal protein |
| YGR148C | RPL24B | 1 | 0 | 60S large subunit ribosomal protein L24.e.B |
| YHL033C | RPL8A | 1 | 0 | 60S large subunit ribosomal protein L7a.e.A |
| YHL001W | RPL14B | 1 | 0 | ribosomal protein |
| YHR010W | RPL27A | 0 | 0 | 60S large subunit ribosomal protein L27.e |
| YHR141C | RPL42B | 0 | 0 | ribosomal protein L36a.e |
| YIL148W | RPL40A | 0 | 0 | ubiquitin |
| YIL133C | RPL16A | 1 | 0 | 60S large subunit ribosomal protein |
| YIL052C | RPL34B | 2 | 0 | ribosomal protein L34.e |
| YIL018W | RPL2B | 0 | 0 | 60S large subunit ribosomal protein L8.e |
| YJL189W | RPL39 | 1 | 0 | 60S large subunit ribosomal protein L39.e |
| YJL177W | RPL17B | 0 | 0 | 60s large subunit ribosomal protein L17.e |
| YJR094W-A | RPL43B | 0 | 0 | 60S large subunit ribosomal protein |
| YKL180W | RPL17A | 1 | 0 | ribosomal protein L17.e |
| YKL006W | RPL14A | 0 | 0 | ribosomal protein |
| YKR094C | RPL40B | 0 | 0 | ubiquitin |
| YLL045C | RPL8B | 0 | 0 | 60s large subunit ribosomal protein L7a.e.B |
| YLR029C | RPL15A | 0 | 0 | 60s large subunit ribosomal protein L15.e.c12 |
| YLR061W | RPL22A | 0 | 0 | ribosomal protein |
| YLR075W | RPL10 | 1 | 0 | 60S large subunit ribosomal protein |
| YLR185W | RPL37A | 1 | 0 | ribosomal protein L37.e |
| YLR325C | RPL38 | 3 | 0 | 60S large subunit ribosomal protein |
| YLR340W | RPP0 | 4 | 3 | acidic ribosomal protein L10.e |
| YLR344W | RPL26A | 1 | 0 | 60S large subunit ribosomal protein |
| YLR406C | RPL31B | 1 | 0 | 60S large subunit ribosomal protein L31.e.c12 |
| YLR448W | RPL6B | 1 | 0 | 60S large subunit ribosomal protein |
| YML073C | RPL6A | 0 | 0 | 60S large subunit ribosomal protein |
| YMR121C | RPL15B | 0 | 0 | 60S large subunit ribosomal protein L15.e.c13 |
| YMR142C | RPL13B | 0 | 0 | 60S large subunit ribosomal protein |
| YMR194W | RPL36A | 0 | 0 | 60S large subunit ribosomal protein |
| YMR242C | RPL20A | 1 | 0 | 60s large subunit ribosomal protein |
| YNL301C | RPL18B | 3 | 0 | 60S large subunit ribosomal protein L18.e |
| YNL162W | RPL42A | 0 | 0 | ribosomal protein L36a.e |
| YNL069C | RPL16B | 1 | 0 | 60S large subunit ribosomal protein |
| YNL067W | RPL9B | 0 | 0 | ribosomal protein L9.e.c14 |
| YOL127W | RPL25 | 1 | 0 | ribosomal protein L23a.e |
| YOL120C | RPL18A | 0 | 0 | 60S large subunit ribosomal protein S18.e |
| YOL039W | RPP2A | 1 | 0 | acidic ribosomal protein P2.beta |
| YOR063W | RPL3 | 0 | 0 | 60S large subunit ribosomal protein L3.e |
| YOR234C | RPL33B | 0 | 0 | ribosomal protein L35a.e.c15 |
| YOR312C | RPL20B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL249C-A | RPL36B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL220W | RPL1A | 0 | 0 | ribosomal protein |
| YPL198W | RPL7B | 0 | 0 | 60S large subunit ribosomal protein |
| YPL143W | RPL33A | 0 | 0 | ribosomal protein L35a.e.c16 |
| YPL131W | RPL5 | 2 | 0 | 60S large subunit ribosomal protein L5.e |
| YPL079W | RPL21B | 0 | 0 | ribosomal protein L21 |
| YPR043W | RPL43A | 0 | 0 | ribosomal protein L37a.e |
| YPR102C | RPL11A | 0 | 0 | ribosomal protein L11.e |
| Cluster | MI0417: |
| YBL072C | RPS8A | 2 | 0 | ribosomal protein S8.e |
| YBR048W | RPS11B | 0 | 0 | ribosomal protein S11.e.B |
| YBR181C | RPS6B | 0 | 0 | ribosomal protein S6.e |
| YBR189W | RPS9B | 0 | 0 | ribosomal protein S9.e.B |
| YCR031C | RPS14A | 0 | 0 | 40S Ribosomal protein S14.e |
| YDL083C | RPS16B | 0 | 0 | ribosomal protein S16.e |
| YDL061C | RPS29B | 1 | 0 | ribosomal protein S29.e.B |
| YDR025W | RPS11A | 2 | 0 | ribosomal protein S11.e |
| YDR064W | RPS13 | 0 | 0 | ribosomal protein |
| YDR447C | RPS17B | 0 | 0 | ribosomal protein S17.e.B |
| YDR450W | RPS18A | 2 | 0 | ribosomal protein S18.e.c4 |
| YER074W | RPS24A | 0 | 0 | 40s small subunit ribosomal protein S24.e |
| YER102W | RPS8B | 3 | 0 | ribosomal protein S8.e |
| YER131W | RPS26B | 2 | 0 | 40S small subunit ribosomal protein S26e-c5 |
| YGL189C | RPS26A | 4 | 0 | 40S small subunit ribosomal protein S26e.c7 |
| YGL123W | RPS2 | 0 | 0 | 40S small subunit ribosomal protein |
| YGR027C | RPS25A | 0 | 0 | ribosomal protein S25.e.c7 |
| YGR118W | RPS23A | 1 | 0 | 40S small subunit ribosomal protein S23.e |
| YGR214W | RPS0A | 1 | 0 | 40S ribosomal protein p40 homolog A |
| YHL015W | RPS20 | 2 | 0 | ribosomal protein |
| YHR021C | RPS27B | 0 | 0 | ribosomal protein S27.e |
| YHR203C | RPS4B | 0 | 0 | ribosomal protein S4.e.c8 |
| YIL069C | RPS24B | 0 | 0 | 40S small subunit ribosomal protein S24.e |
| YJL191W | RPS14B | 1 | 0 | 40S small subunit ribosomal protein S14.e.B |
| YJL190C | RPS22A | 2 | 0 | ribosomal protein S15a.e.c10 |
| YJL136C | RPS21B | 0 | 0 | 40S small subunit ribosomal protein S21.e |
| YJR123W | RPS5 | 1 | 0 | ribosomal protein S5.e |
| YJR145C | RPS4A | 2 | 0 | ribosomal protein S4.e.c10 |
| YKL156W | RPS27A | 0 | 0 | ribosomal protein S27.e |
| YKR057W | RPS21A | 0 | 0 | ribosomal protein S21.e |
| YLR048W | RPS0B | 0 | 0 | 40S ribosomal protein p40 homolog B |
| YLR167W | RPS31 | 1 | 0 | ubiquitin/40S small subunit ribosomal protein |
| YLR264W | RPS28B | 7 | 0 | 40S small subunit ribosomal protein S28.e.c12 |
| YLR287C-A | RPS30A | 0 | 0 | 40S small subunit ribosomal protein |
| YLR333C | RPS25B | 1 | 0 | ribosomal protein S25.e.c12 |
| YLR367W | RPS22B | 0 | 0 | ribosomal protein S15a.e.c12 |
| YLR388W | RPS29A | 1 | 0 | ribosomal protein S29.e.A |
| YLR441C | RPS1A | 2 | 0 | ribosomal protein S3a.e |
| YML063W | RPS1B | 0 | 0 | ribosomal protein S3a.e |
| YML026C | RPS18B | 0 | 0 | ribosomal protein S18.e.c13 |
| YML024W | RPS17A | 0 | 0 | ribosomal protein S17.e.A |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YMR143W | RPS16A | 0 | 0 | ribosomal protein S16.e |
| YMR230W | RPS10B | 0 | 0 | ribosomal protein |
| YNL302C | RPS19B | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YNL178W | RPS3 | 2 | 0 | ribosomal protein S3.e |
| YNL096C | RPS7B | 2 | 0 | strong similarity to ribosomal protein S7 (Class II) |
| YOL121C | RPS19A | 0 | 0 | 40S small subunit ribosomal protein S19.e |
| YOL040C | RPS15 | 0 | 0 | 40S small subunit ribosomal protein |
| YOR096W | RPS7A | 1 | 0 | ribosomal protein |
| YOR167C | RPS28A | 14 | 0 | 40S small subunit ribosomal protein S28.e.c15 |
| YOR182C | RPS30B | 0 | 0 | ribosomal protein S30 |
| YOR293W | RPS10A | 0 | 0 | ribosomal protein S10.e |
| YOR369C | RPS12 | 0 | 0 | 40S small subunit acidic ribosomal protein S12 |
| YPL090C | RPS6A | 0 | 0 | ribosomal protein S6.e |
| YPL081W | RPS9A | 0 | 0 | ribosomal protein S9.e.A |
| YPR132W | RPS23B | 0 | 0 | 40S small subunit ribosomal protein S23.e |
| Cluster | MI0418: |
| YBL080C | PET112 | 1 | 0 | required to maintain rho+ mitochondrial DNA |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YDL069C | CBS1 | 0 | 0 | translational activator of COB mRNA |
| YDR197W | CBS2 | 0 | 0 | cytochrome B translational activator protein |
| YER153C | PET122 | 2 | 1 | translational activator of cytochrome c oxidase subunit III |
| YGR222W | PET54 | 3 | 2 | splicing protein and translational activator, mitochondrial |
| YLR067C | PET309 | 3 | 0 | required for stability and translation of COX1 mRNA |
| YLR203C | MSS51 | 2 | 0 | possibly involved in translational activation of COX1 and COB mRNA |
| YMR064W | AEP1 | 1 | 0 | nuclear control of ATPase messenger RNA expression protein |
| YMR257C | PET111 | 0 | 0 | required for translation of COX2 mRNA |
| YMR282C | AEP2 | 0 | 0 | required for the expression of subunit-9 of atp synthase |
| YNR045W | PET494 | 1 | 1 | translational activator, mitochondrial |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| Cluster | MI0419: |
| YGL023C | PIB2 | 1 | 1 | phosphatidylinositol 3-phosphate binding |
| YMR023C | MSS1 | 2 | 1 | mitochondrial GTPase involved in expression of COX1 |
| Cluster | MI0420: |
| YCR046C | IMG1 | 1 | 0 | ribosomal protein, mitochondrial |
| YNL137C | NAM9 | 0 | 0 | ribosomal protein, mitochondrial |
| Q0140 | VAR1 | 0 | 0 | mitochondrial ribosomal protein |
| Cluster | MI0421: |
| YBL038W | MRPL16 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YBR122C | MRPL36 | 2 | 0 | ribosomal protein YmL36 precursor, mitochondrial |
| YBR268W | MRPL37 | 0 | 0 | ribosomal protein YmL37, mitochondrial |
| YBR282W | MRPL27 | 1 | 0 | ribosomal protein YmL27 precursor, mitochondrial |
| YCR003W | MRPL32 | 1 | 0 | ribosomal protein YmL32, mitochondrial |
| YDL202W | MRPL11 | 2 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR237W | MRPL7 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YDR405W | MRP20 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR462W | MRPL28 | 0 | 0 | ribosomal protein of the large subunit (YmL28), mitochondrial |
| YGR076C | MRPL25 | 0 | 0 | ribosomal protein YmL25, mitochondrial |
| YGR220C | MRPL9 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YHR147C | MRPL6 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YJL096W | MRPL49 | 3 | 0 | ribosomal protein YmL49, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YKL170W | MRPL38 | 0 | 0 | ribosomal protein of the large subunit (L14), mitochondrial |
| YKL167C | MRP49 | 0 | 0 | ribosomal protein, mitochondrial |
| YKL138C | MRPL31 | 1 | 0 | ribosomal protein YmL31, mitochondrial |
| YKR006C | MRPL13 | 1 | 0 | ribosomal protein YmL13, mitochondrial |
| YKR085C | MRPL20 | 0 | 0 | ribosomal protein YmL20, mitochondrial |
| YLR312W-A | MRPL15 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YLR439W | MRPL4 | 1 | 0 | ribosomal protein, mitochondrial |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR193W | MRPL24 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR225C | MRPL44 | 0 | 0 | ribosomal protein YMR44, mitochondrial |
| YMR286W | MRPL33 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL284C | MRPL10 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL252C | MRPL17 | 3 | 0 | ribosomal protein of the large subunit (YmL30), mitochondrial |
| YNL185C | MRPL19 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YOR150W | MRPL23 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YPL173W | MRPL40 | 0 | 0 | ribosomal protein of the large subunit (YmL40), mitochondrial |
| Cluster | MI0422: |
| YBR146W | MRPS9 | 1 | 0 | ribosomal protein S9 precursor, mitochondrial |
| YBR251W | MRPS5 | 0 | 0 | ribosomal protein S5, mitochondrial |
| YDL045W-A | MRP10 | 0 | 0 | mitochondrial ribosomal protein |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YDR347W | MRP1 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YFR049W | YMR31 | 9 | 0 | ribosomal protein, mitochondrial |
| YGR084C | MRP13 | 2 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHL004W | MRP4 | 12 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YHR075C | PPE1 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YKL142W | MRP8 | 6 | 0 | ribosomal protein, mitochondrial |
| YKL003C | MRP17 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YNL306W | MRPS18 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YOR158W | PET123 | 5 | 0 | ribosomal protein, mitochondrial |
| YPR166C | MRP2 | 0 | 0 | ribosomal protein S14 |
| Cluster | MI0432: |
| YBR114W | RAD16 | 3 | 1 | nucleotide excision repair protein |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YDR311W | TFB1 | 24 | 0 | TFIIH subunit (transcription initiation factor), 75 kD |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YEL037C | RAD23 | 6 | 1 | nucleotide excision repair protein (ubiquitin-like protein) |
| YER162C | RAD4 | 3 | 2 | excision repair protein |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YGR258C | RAD2 | 0 | 0 | structure-specific nuclease of the nucleotide excision repairosome |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YJR052W | RAD7 | 2 | 2 | nucleotide excision repair protein |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YMR201C | RAD14 | 1 | 0 | nucleotide excision repair protein |
| YPL122C | TFB2 | 0 | 0 | TFIIH subunit (transcription/repair factor) |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| Cluster | MI0433: |
| YDR004W | RAD57 | 3 | 1 | DNA repair protein |
| YDR076W | RAD55 | 2 | 2 | DNA repair protein |
| YER095W | RAD51 | 11 | 3 | DNA repair protein |
| YGL163C | RAD54 | 1 | 1 | DNA-dependent ATPase of the SNF2P family |
| YML032C | RAD52 | 5 | 1 | recombination and DNA repair protein |
| Cluster | MI0434: |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YGL090W | LIF1 | 4 | 1 | DNA ligase IV interacting factor |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YOR005C | DNL4 | 1 | 1 | DNA ligase IV |
| Cluster | MI0435: |
| YCR092C | MSH3 | 3 | 3 | DNA mismatch repair protein |
| YDR097C | MSH6 | 3 | 3 | DNA mismatch repair protein |
| YMR167W | MLH1 | 4 | 4 | DNA mismatch repair protein |
| YNL082W | PMS1 | 4 | 4 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 4 | DNA mismatch repair protein |
| Cluster | MI0436: |
| YBR081C | SPT7 | 13 | 13 | involved in alteration of transcription start site selection |
| YBR198C | TAF90 | 16 | 13 | TFIID and SAGA subunit |
| YDR145W | TAF61 | 14 | 13 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 13 | TFIID and SAGA subunit |
| YDR176W | NGG1 | 23 | 13 | general transcriptional adaptor or co-activator |
| YDR392W | SPT3 | 14 | 13 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 13 | general transcriptional adaptor or co-activator |
| YGL112C | TAF60 | 19 | 13 | TFIID and SAGA subunit |
| YGR252W | GCN5 | 16 | 13 | histone acetyltransferase |
| YHR099W | TRA1 | 15 | 13 | component of the Ada-Spt transcriptional regulatory complex |
| YLR055C | SPT8 | 13 | 13 | transcriptional adaptor or co-activator |
| YMR236W | TAF17 | 20 | 13 | TFIID and SAGA subunit |
| YOL148C | SPT20 | 15 | 13 | member of the TBP class of SPT proteins that alter transcription site selection |
| YPL254W | HFI1 | 13 | 13 | transcriptional coactivator |
| Cluster | MI0437: |
| YAL051W | OAF1 | 1 | 1 | peroxisome proliferating transcription factor |
| YOR363C | PIP2 | 1 | 1 | peroxisome proliferating transcription factor |
| Cluster | MI0438: |
| YAL021C | CCR4 | 2 | 2 | transcriptional regulator |
| YCR093W | CDC39 | 4 | 3 | nuclear protein |
| YDL165W | CDC36 | 6 | 0 | transcription factor |
| YDL160C | DHH1 | 13 | 3 | putative RNA helicase of the DEAD box family |
| YER068W | MOT2 | 3 | 3 | transcriptional repressor |
| YFL028C | CAF16 | 1 | 1 | ATP-binding cassette transporter family member |
| YGR092W | DBF2 | 7 | 4 | ser/thr protein kinase related to DBF20P |
| YIL106W | MOB1 | 9 | 4 | required for completion of mitosis and maintenance of ploidy |
| YIL038C | NOT3 | 3 | 3 | general negative regulator of transcription, subunit 3 |
| YJR122W | CAF17 | 3 | 2 | CCR4 associated factor |
| YKR036C | CAF4 | 0 | 0 | CCR4 associated factor |
| YNR052C | POP2 | 8 | 4 | required for glucose derepression |
| YPR072W | NOT5 | 4 | 3 | component of the NOT protein complex |
| Cluster | MI0439: |
| YDR173C | ARG82 | 0 | 0 | arginine metabolism transcription factor |
| YML099C | ARG81 | 3 | 1 | transcription factor involved in arginine metabolism |
| YMR042W | ARG80 | 2 | 1 | transcription factor involved in arginine metabolism |
| YMR043W | MCM1 | 6 | 0 | transcription factor of the MADS box family |
| Cluster | MI0440: |
| YBL103C | RTG3 | 1 | 1 | bHLH/zip transcription factor that regulates CIT2 gene expression |
| YOL067C | RTG1 | 1 | 1 | basic helix-loop-helix transcription factor that regulates CIT2 gene expression |
| Cluster | MI0441: |
| YBR112C | CYC8 | 4 | 1 | general repressor of transcription |
| YCR084C | TUP1 | 3 | 1 | general transcription repressor |
| Cluster | MI0442: |
| YMR053C | STB2 | 2 | 1 | SIN3P binding protein |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| YNL309W | STB1 | 2 | 1 | SIN3P binding protein |
| YOL004W | SIN3 | 8 | 3 | transcription regulatory protein |
| Cluster | MI0443: |
| YDR253C | MET32 | 0 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YIR017C | MET28 | 7 | 2 | transcriptional activator of sulfur amino acid metabolism |
| YJR060W | CBF1 | 2 | 2 | kinetochore protein |
| YNL103W | MET4 | 3 | 2 | transcriptional activator of sulfur metabolism |
| YPL038W | MET31 | 1 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| Cluster | MI0444: |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| Cluster | MI0445: |
| YDR397C | NCB2 | 1 | 1 | functional homolog of human NC2beta/Dr1 |
| YER159C | BUR6 | 2 | 1 | functional homolog of human NC2alpha |
| Cluster | MI0446: |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| Cluster | MI0447: |
| YDR207C | UME6 | 8 | 1 | negative transcriptional regulator |
| YJR094C | IME1 | 3 | 1 | transcription factor required for sporulation |
| Cluster | MI0448: |
| YLR451W | LEU3 | 1 | 0 | transcription factor |
| Cluster | MI0449: |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| Cluster | MI0450: |
| YCR093W | CDC39 | 4 | 3 | nuclear protein |
| YDL165W | CDC36 | 6 | 0 | transcription factor |
| YER068W | MOT2 | 3 | 3 | transcriptional repressor |
| YIL038C | NOT3 | 3 | 3 | general negative regulator of transcription, subunit 3 |
| YPR072W | NOT5 | 4 | 3 | component of the NOT protein complex |
| Cluster | MI0451: |
| YBR289W | SNF5 | 1 | 1 | component of SWI/SNF transcription activator complex |
| YDR073W | SNF11 | 4 | 1 | component of SWI/SNF transcription activator complex |
| YHL025W | SNF6 | 2 | 0 | global transcription activator |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YMR033W | ARP9 | 0 | 0 | Actin-related protein |
| YNR023W | SNF12 | 0 | 0 | component of SWI/SNF global transcription activator complex |
| YOR290C | SNF2 | 3 | 2 | component of SWI/SNF global transcription activator complex |
| YPL129W | ANC1 | 2 | 1 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| YPR034W | ARP7 | 0 | 0 | component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex |
| Cluster | MI0452: |
| YER001W | MNN1 | 0 | 0 | alpha-1,3-mannosyltransferase |
| YLR182W | SWI6 | 6 | 0 | transcription factor |
| Cluster | MI0453: |
| YDL056W | MBP1 | 1 | 1 | transcription factor, subunit of the MBF factor |
| YLR182W | SWI6 | 6 | 1 | transcription factor |
| Cluster | MI0454: |
| YDR009W | GAL3 | 1 | 1 | galactokinase |
| YML051W | GAL80 | 3 | 2 | negative regulator for expression of galactose-induced genes |
| YPL248C | GAL4 | 2 | 1 | transcription factor |
| Cluster | MI0455: |
| YNL199C | GCR2 | 3 | 0 | glycolytic genes transcriptional activator |
| YPL075W | GCR1 | 1 | 0 | transcriptional activator |
| Cluster | MI0458: |
| YPL086C | ELP3 | 0 | 0 | subunit of elongator/RNAPII holoenzyme with histone acetylase activity |
| Cluster | MI0459: |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YDR404C | RPB7 | 2 | 1 | DNA-directed RNA polymerase II, 19 KD subunit |
| YGL070C | RPB9 | 44 | 0 | DNA-directed RNA polymerase II, 14.2 KD subunit |
| YHR143W-A | RPC10 | 2 | 0 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YIL021W | RPB3 | 8 | 2 | DNA-directed RNA-polymerase II, 45 kDa |
| YJL140W | RPB4 | 4 | 1 | DNA-directed RNA polymerase II, 32 kDa subunit |
| YLR418C | CDC73 | 1 | 0 | DNA-directed RNA polymerase II accessory protein |
| YOL005C | RPB11 | 1 | 1 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YOR151C | RPB2 | 2 | 1 | DNA-directed RNA polymerase II, 140 kDa chain |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| Cluster | MI0460: |
| YBL093C | ROX3 | 0 | 0 | transcription factor |
| YBR193C | MED8 | 13 | 7 | transcriptional regulation mediator |
| YBR253W | SRB6 | 1 | 1 | DNA-directed RNA polymerase II suppressor protein |
| YDL005C | MED2 | 7 | 5 | transcriptional regulation mediator |
| YDR308C | SRB7 | 4 | 2 | DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit |
| YER022W | SRB4 | 101 | 7 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YER179W | DMC1 | 15 | 0 | meiosis-specific protein |
| YGL151W | NUT1 | 0 | 0 | negative transcription regulator from artifical reporters |
| YGL025C | PGD1 | 8 | 5 | mediator complex subunit |
| YGR104C | SRB5 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YHR041C | SRB2 | 18 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YHR058C | MED6 | 6 | 1 | RNA polymerase II transcriptional regulation mediator |
| YLR071C | RGR1 | 2 | 1 | DNA-directed RNA polymerase II holoenzyme subunit |
| YMR112C | MED11 | 3 | 2 | mediator complex subunit |
| YNL236W | SIN4 | 12 | 2 | global regulator protein |
| YNR010W | CSE2 | 2 | 1 | subunit of RNA polymerase II mediator complex |
| YOL135C | MED7 | 9 | 6 | member of RNA Polymerase II transcriptional regulation mediator complex |
| YOL051W | GAL11 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YOR174W | MED4 | 11 | 7 | transcription regulation mediator |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPR168W | NUT2 | 3 | 0 | negative transcription regulator from artifical reporters |
| Cluster | MI0463: |
| YER148W | SPT15 | 10 | 0 | the TATA-binding protein TBP |
| Cluster | MI0464: |
| YBR198C | TAF90 | 16 | 4 | TFIID and SAGA subunit |
| YCR042C | TSM1 | 1 | 1 | component of TFIID complex |
| YDR145W | TAF61 | 14 | 4 | TFIID and SAGA subunit |
| YDR167W | TAF25 | 22 | 9 | TFIID and SAGA subunit |
| YGL112C | TAF60 | 19 | 4 | TFIID and SAGA subunit |
| YGR274C | TAF145 | 2 | 1 | TFIID subunit (TBP-associated factor), 145 kD |
| YML098W | TAF19 | 4 | 2 | TFIID subunit (TBP-associated factor), 19 kD |
| YML015C | TAF40 | 5 | 2 | TFIID subunit (TBP-associated factor), 40KD |
| YMR227C | TAF67 | 0 | 0 | TFIID subunit (TBP-associated factor), 67 kD |
| YMR236W | TAF17 | 20 | 4 | TFIID and SAGA subunit |
| YPL129W | ANC1 | 2 | 1 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPL011C | TAF47 | 2 | 0 | component of the TBP-associated protein complex |
| Cluster | MI0467: |
| YER019C-A | SBH2 | 2 | 0 | ER protein-translocation complex subunit |
| Cluster | MI0468: |
| YDR086C | SSS1 | 1 | 1 | ER protein-translocase complex subunit |
| 0 | 0 |
| YLR378C | SEC61 | 2 | 1 | ER protein-translocation complex subunit |
| Cluster | MI0469: |
| YBR171W | SEC66 | 3 | 0 | ER protein-translocation complex subunit |
| YLR292C | SEC72 | 1 | 0 | ER protein-translocation complex subunit |
| YOR254C | SEC63 | 1 | 0 | ER protein-translocation complex subunit |
| YPL094C | SEC62 | 3 | 0 | ER protein-translocation complex subunit |
| Cluster | MI0470: |
| YJL034W | KAR2 | 2 | 0 | nuclear fusion protein |
| Cluster | MI0510: |
| YBL063W | KIP1 | 1 | 0 | kinesin-related protein |
| YEL061C | CIN8 | 2 | 0 | kinesin-related protein |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| YGL005C | 2 | 0 | weak similarity to Xenopus kinesin-related protein Eg5 (Class III) |
| YHR156C | 3 | 0 | weak similarity to mouse kinesin KIF3B (Class III) |
| YMR198W | CIK1 | 1 | 1 | spindle pole body associated protein |
| YPL155C | KIP2 | 1 | 0 | kinesin-related protein |
| YPR141C | KAR3 | 3 | 1 | kinesin-related protein |
| Cluster | MI0511: |
| YDR424C | DYN2 | 0 | 0 | dynein light chain 1, cytosolic |
| YDR488C | PAC11 | 2 | 0 | required in the absence of CIN8P |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| Cluster | MI0512: |
| YHR129C | ARP1 | 6 | 2 | centractin |
| YMR294W | JNM1 | 12 | 2 | mitosis protein, involved in nuclear migration |
| YPL174C | NIP100 | 8 | 2 | component of the dynactin complex |
| Cluster | MI0547: |
| YHR012W | VPS29 | 2 | 1 | involved in vacuolar protein sorting |
| YJL154C | VPS35 | 5 | 2 | protein-sorting protein, vacuolar |
| YJL053W | PEP8 | 4 | 1 | vacuolar protein sorting/targeting protein |
| Cluster | MI0548: |
| YOR069W | VPS5 | 3 | 1 | involved in Golgi retention and vacuolar sorting |
| YOR132W | VPS17 | 2 | 1 | vacuolar protein sorting-associated protein |
| Cluster | MI0552: |
| YDR468C | TLG1 | 7 | 1 | member of the syntaxin family of t-SNAREs |
| YDR498C | SEC20 | 3 | 1 | secretory pathway protein |
| YLR026C | SED5 | 8 | 0 | syntaxin (T-SNARE) |
| YMR183C | SSO2 | 1 | 0 | syntaxin (T-SNARE) |
| YOL018C | TLG2 | 10 | 1 | member of the syntaxin family of t-SNAREs |
| YOR036W | PEP12 | 11 | 0 | syntaxin (T-SNARE), vacuolar |
| YOR075W | UFE1 | 5 | 1 | syntaxin (T-SNARE) of the ER |
| YPL232W | SSO1 | 2 | 0 | syntaxin-related protein |
| Cluster | MI0553: |
| YGL212W | VAM7 | 15 | 1 | vacuolar morphogenesis protein |
| YOR106W | VAM3 | 5 | 1 | syntaxin (t-SNARE) |
| Cluster | MI0628: |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YBR237W | PRP5 | 1 | 0 | pre-mRNA processing RNA-helicase |
| YDR088C | SLU7 | 4 | 2 | pre-mRNA splicing factor affecting 3' splice site choice |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YDR364C | CDC40 | 0 | 0 | cell division control protein |
| YER013W | PRP22 | 1 | 0 | pre-mRNA splicing factor |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YER172C | BRR2 | 2 | 1 | RNA helicase-related protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YGR006W | PRP18 | 1 | 1 | U5 snRNA-associated protein |
| YGR074W | SMD1 | 10 | 1 | snRNA-associated protein |
| YGR075C | PRP38 | 2 | 1 | pre-mRNA splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YHR165C | PRP8 | 1 | 0 | U5 snRNP protein, pre-mRNA splicing factor |
| YIL061C | SNP1 | 30 | 1 | U1 small nuclear ribonucleoprotein |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YKL074C | MUD2 | 8 | 1 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 0 | splicing factor |
| YKR086W | PRP16 | 0 | 0 | RNA-dependent ATPase |
| YLR147C | SMD3 | 16 | 0 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YML046W | PRP39 | 2 | 1 | pre-mRNA splicing factor |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YNR011C | PRP2 | 1 | 0 | RNA-dependent ATPase of DEAH box family |
| YOR148C | SPP2 | 1 | 0 | involved in pre-mRNA processing |
| YOR159C | SME1 | 6 | 0 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPL178W | CBC2 | 3 | 1 | small subunit of the nuclear cap-binding protein complex CBC |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YPR178W | PRP4 | 4 | 0 | U4/U6 snRNP 52 KD protein |
| Cluster | MI0629: |
| YJL203W | PRP21 | 14 | 0 | pre-mRNA splicing factor |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| Cluster | MI0630: |
| YDL043C | PRP11 | 21 | 1 | pre-mRNA splicing factor |
| YDL030W | PRP9 | 18 | 1 | pre-mRNA splicing factor (snRNA-associated protein) |
| Cluster | MI0684: |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YMR201C | RAD14 | 1 | 0 | nucleotide excision repair protein |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| Cluster | MI0685: |
| YEL037C | RAD23 | 6 | 1 | nucleotide excision repair protein (ubiquitin-like protein) |
| YER162C | RAD4 | 3 | 1 | excision repair protein |
| Cluster | MI0686: |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YDR311W | TFB1 | 24 | 0 | TFIIH subunit (transcription initiation factor), 75 kD |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YGR258C | RAD2 | 0 | 0 | structure-specific nuclease of the nucleotide excision repairosome |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YPL122C | TFB2 | 0 | 0 | TFIIH subunit (transcription/repair factor) |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| Cluster | MI0687: |
| YBR114W | RAD16 | 3 | 1 | nucleotide excision repair protein |
| YJR052W | RAD7 | 2 | 1 | nucleotide excision repair protein |
| Cluster | MI0689: |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| Cluster | MI0690: |
| YGL090W | LIF1 | 4 | 1 | DNA ligase IV interacting factor |
| YOR005C | DNL4 | 1 | 1 | DNA ligase IV |
| Cluster | MI0691: |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| Cluster | MI0692: |
| YCR092C | MSH3 | 3 | 2 | DNA mismatch repair protein |
| YNL082W | PMS1 | 4 | 2 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 2 | DNA mismatch repair protein |
| Cluster | MI0693: |
| YDR097C | MSH6 | 3 | 1 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 1 | DNA mismatch repair protein |
| Cluster | MI0694: |
| YMR167W | MLH1 | 4 | 0 | DNA mismatch repair protein |
| Cluster | MI0695: |
| YGR252W | GCN5 | 16 | 1 | histone acetyltransferase |
| YOL148C | SPT20 | 15 | 1 | member of the TBP class of SPT proteins that alter transcription site selection |
| Cluster | MI0697: |
| YDR176W | NGG1 | 23 | 5 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 5 | general transcriptional adaptor or co-activator |
| YGR252W | GCN5 | 16 | 5 | histone acetyltransferase |
| YHR099W | TRA1 | 15 | 5 | component of the Ada-Spt transcriptional regulatory complex |
| YOL148C | SPT20 | 15 | 5 | member of the TBP class of SPT proteins that alter transcription site selection |
| YPL254W | HFI1 | 13 | 5 | transcriptional coactivator |
| Cluster | MI0704: |
| YIR017C | MET28 | 7 | 2 | transcriptional activator of sulfur amino acid metabolism |
| YJR060W | CBF1 | 2 | 2 | kinetochore protein |
| YNL103W | MET4 | 3 | 2 | transcriptional activator of sulfur metabolism |
| Cluster | MI0705: |
| YIR017C | MET28 | 7 | 1 | transcriptional activator of sulfur amino acid metabolism |
| YNL103W | MET4 | 3 | 1 | transcriptional activator of sulfur metabolism |
| YPL038W | MET31 | 1 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| Cluster | MI0706: |
| YDR253C | MET32 | 0 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| YIR017C | MET28 | 7 | 1 | transcriptional activator of sulfur amino acid metabolism |
| YNL103W | MET4 | 3 | 1 | transcriptional activator of sulfur metabolism |
| Cluster | MI0962: |
| YBR081C | SPT7 | 13 | 4 | involved in alteration of transcription start site selection |
| YDR392W | SPT3 | 14 | 4 | general transcriptional adaptor or co-activator |
| YDR448W | ADA2 | 21 | 4 | general transcriptional adaptor or co-activator |
| YGL112C | TAF60 | 19 | 4 | TFIID and SAGA subunit |
| YHR099W | TRA1 | 15 | 4 | component of the Ada-Spt transcriptional regulatory complex |
| Cluster | BI0001: |
| YDL220C | CDC13 | 2 | 0 | cell division control protein |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0002: |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| Cluster | BI0003: |
| YPL204W | HRR25 | 4 | 1 | casein kinase I, ser/thr/tyr protein kinase |
| YNL118C | DCP2 | 5 | 2 | suppressor protein of a yeast pet mutant |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YLL013C | PUF3 | 2 | 0 | transcript-specific regulator of mRNA degradation |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YEL015W | 12 | 2 | weak similarity to SPA2P (Class III) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YGL197W | MDS3 | 1 | 0 | negative regulator of early meiotic expression |
| YBL051C | PIN4 | 4 | 0 | similarity to S.pombe Z66568_C protein (Class IV) |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YFR001W | LOC1 | 0 | 0 | weak similarity to rabbit triadin SPP41P (Class III) |
| YHR098C | SFB3 | 3 | 1 | similarity to human hypothetical protein (Class IV) |
| YEL015W | 12 | 2 | weak similarity to SPA2P (Class III) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YGL197W | MDS3 | 1 | 0 | negative regulator of early meiotic expression |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| YLR310C | CDC25 | 8 | 0 | GDP/GTP exchange factor for RAS1P and RAS2P |
| YLL001W | DNM1 | 1 | 0 | dynamin-related protein |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YBR125C | PTC4 | 1 | 0 | serine/threonine protein phosphatases (PP2Cs) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YBR225W | 0 | 0 | hypothetical protein (Class V) |
| YNL207W | 1 | 0 | similarity to M.jannaschii hypothetical protein MJ1073 (Class IV) |
| YOR215C | 1 | 0 | similarity to M.xanthus hypothetical protein (Class IV) |
| YPL078C | ATP4 | 3 | 0 | F1F0-ATPase complex, F0 subunit B |
| YHR098C | SFB3 | 3 | 1 | similarity to human hypothetical protein (Class IV) |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| YNL272C | SEC2 | 1 | 0 | protein transport protein |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YOR061W | CKA2 | 4 | 0 | casein kinase II alpha' chain |
| YDL047W | SIT4 | 4 | 2 | ser/thr protein phosphatase |
| YDL047W | SIT4 | 4 | 2 | ser/thr protein phosphatase |
| YDL153C | SAS10 | 32 | 0 | involved in silencing |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YKR026C | GCN3 | 15 | 0 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YJR134C | SGM1 | 2 | 0 | similarity to paramyosin, myosin (Class III) |
| YNL113W | RPC19 | 7 | 0 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YKL140W | TGL1 | 0 | 0 | triacylglycerol lipase |
| YML091C | RPM2 | 0 | 0 | ribonuclease P precursor, mitochondrial |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YNL027W | CRZ1 | 0 | 0 | calcineurin responsive zinc-finger |
| YNL118C | DCP2 | 5 | 2 | suppressor protein of a yeast pet mutant |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YER138C | 0 | 0 |
| YOL149W | DCP1 | 21 | 3 | mRNA decapping enzyme |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YKL143W | LTV1 | 5 | 0 | low-temperature viability protein |
| YPR181C | SEC23 | 9 | 1 | component of COPII coat of ER-golgi vesicles |
| YJR134C | SGM1 | 2 | 0 | similarity to paramyosin, myosin (Class III) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YPR181C | SEC23 | 9 | 1 | component of COPII coat of ER-golgi vesicles |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YAR014C | BUD14 | 2 | 1 | similarity to hypothetical protein S.pombe (Class IV) |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YMR307W | GAS1 | 2 | 0 | glycophospholipid-anchored surface glycoprotein |
| YKR028W | SAP190 | 3 | 1 | SIT4P-associated protein |
| YML091C | RPM2 | 0 | 0 | ribonuclease P precursor, mitochondrial |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| Cluster | BI0004: |
| YOR386W | PHR1 | 0 | 0 | deoxyribodipyrimidine photo-lyase |
| YPL104W | MSD1 | 0 | 0 | aspartate--tRNA ligase, mitochondrial |
| Cluster | BI0005: |
| YJL020C | BBC1 | 0 | 0 | similarity to S.pombe hypothetical protein SPAC23A1.16 (Class IV) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YLR258W | GSY2 | 5 | 0 | UDP-glucose--starch glucosyltransferase, isoform 2 |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0006: |
| YNL090W | RHO2 | 1 | 0 | GTP-binding protein of the RHO subfamily of RAS-like proteins |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| Cluster | BI0007: |
| YBR059C | AKL1 | 7 | 0 | Ark-family Kinase-Like protein |
| YPR033C | HTS1 | 3 | 0 | histidine--tRNA ligase, mitochondrial |
| Cluster | BI0008: |
| YDR200C | 3 | 0 | similarity to hypothetical protein YLR238W (Class IV) |
| YDR200C | 3 | 0 | similarity to hypothetical protein YLR238W (Class IV) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YMR029C | 0 | 0 | weak similarity to human nuclear autoantigen (Class III) |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YFR008W | 7 | 0 | weak similarity to human centromere protein E (Class III) |
| Cluster | BI0009: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YGL016W | KAP122 | 4 | 0 | Member of the karyopherin-beta family, nuclear import |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YPR019W | CDC54 | 0 | 0 | member of the CDC46P/MCM2P/MCM3P family |
| YBR202W | CDC47 | 4 | 0 | cell division control protein |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YJR065C | ARP3 | 6 | 5 | actin related protein |
| YJR029W | 0 | 0 |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| YBR208C | DUR1,2 | 0 | 0 | urea amidolyase |
| YNL271C | BNI1 | 8 | 0 | regulator of budding |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YLR309C | IMH1 | 2 | 0 | involved in vesicular transport |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| Cluster | BI0010: |
| YER136W | GDI1 | 4 | 1 | GDP dissociation inhibitor |
| YER031C | YPT31 | 7 | 0 | GTP-binding protein of the rab family |
| YFL038C | YPT1 | 10 | 0 | GTP-binding protein of the rab family |
| YGL210W | YPT32 | 0 | 0 | small GTP-binding protein essential for Golgi function |
| YFL038C | YPT1 | 10 | 0 | GTP-binding protein of the rab family |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YML001W | YPT7 | 2 | 0 | GTP-binding protein of the RAB family |
| YFL005W | SEC4 | 3 | 1 | GTP-binding protein of the ras superfamily |
| YBR264C | YPT10 | 2 | 0 | similarity to GTP-binding proteins (Class III) |
| YKR014C | YPT52 | 4 | 0 | GTP-binding protein of the rab family |
| Cluster | BI0011: |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YNL182C | 4 | 0 | weak similarity to S.pombe hypothetical protein (Class IV) |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| Cluster | BI0012: |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YFR015C | GSY1 | 6 | 0 | UDP glucose--starch glucosyltransferase, isoform 1 |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YDR130C | FIN1 | 1 | 1 | weak similarity to sea urchin myosin heavy chain |
| Cluster | BI0013: |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YBR218C | PYC2 | 0 | 0 | pyruvate carboxylase 2 |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YKL144C | RPC25 | 3 | 0 | DNA-direcred RNA polymerase III, 25 KD subunit |
| YNR003C | RPC34 | 4 | 1 | DNA-directed RNA polymerase III, 34 KD subunit |
| YFL042C | 2 | 1 | similarity to hypothetical protein YLR072W (Class IV) |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YMR285C | NGL2 | 1 | 0 | similarity to CCR4P (Class III) |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YMR303C | ADH2 | 1 | 1 | alcohol dehydrogenase II |
| YER021W | RPN3 | 2 | 0 | 26S proteasome regulatory subunit |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YGL062W | PYC1 | 0 | 0 | pyruvate carboxylase 1 |
| YPR010C | RPA135 | 5 | 2 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPR190C | RPC82 | 2 | 1 | DNA-directed RNA polymerase III, 82 KD subunit |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YPR067W | ISA2 | 0 | 0 | mitochondrial protein required for iron metabolism |
| YHR112C | 2 | 0 | similarity to cystathionine gamma-synthases (Class III) |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YBL015W | ACH1 | 0 | 0 | acetyl-CoA hydrolase |
| YDR388W | RVS167 | 9 | 0 | reduced viability upon starvation protein |
| YNL113W | RPC19 | 7 | 2 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YBR150C | TBS1 | 0 | 0 | weak similarity to transcription factors (Class III) |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YNL248C | RPA49 | 0 | 0 | DNA-directed RNA polymerase A (I) chain, 46 kDa |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| Cluster | BI0014: |
| YDR266C | 1 | 0 | similarity to hypothetical C.elegans protein (Class IV) |
| YDR266C | 1 | 0 | similarity to hypothetical C.elegans protein (Class IV) |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0015: |
| YGL087C | MMS2 | 0 | 0 | part of the error-free postreplication repair pathway |
| YOL081W | IRA2 | 1 | 0 | GTPase-activating protein for RAS proteins |
| YOR220W | 3 | 0 | hypothetical protein (Class V) |
| YDR092W | UBC13 | 1 | 0 | E2 ubiquitin-conjugating enzyme |
| YDR092W | UBC13 | 1 | 0 | E2 ubiquitin-conjugating enzyme |
| YER125W | RSP5 | 12 | 0 | hect domain E3 ubiquitin-protein ligase |
| Cluster | BI0016: |
| YOR043W | WHI2 | 5 | 0 | growth regulation protein |
| YPR030W | CSR2 | 1 | 0 | similarity to YBL101C (Class IV) |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| Cluster | BI0017: |
| YCR008W | SAT4 | 1 | 0 | serine/threonine-specific protein kinase |
| YPL031C | PHO85 | 14 | 0 | cyclin-dependent protein kinase |
| Cluster | BI0018: |
| YOR276W | CAF20 | 3 | 1 | mRNA CAP-binding protein (eIF4F), 20K subunit |
| YOL139C | CDC33 | 5 | 1 | translation initiation factor eIF4E |
| Cluster | BI0019: |
| YMR001C | CDC5 | 3 | 0 | involved in regulation of DNA replication |
| YAL047C | SPC72 | 6 | 0 | STU2P Interactant |
| YFL008W | SMC1 | 6 | 3 | chromosome segregation protein |
| YDL003W | MCD1 | 2 | 2 | Mitotic Chromosome Determinant |
| YNL175C | NOP13 | 2 | 0 | similarity to S.pombe Rnp24p, NSR1P and human splicing factor (Class III) |
| YIL026C | IRR1 | 3 | 2 | essential protein |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YJL074C | SMC3 | 3 | 3 | required for structural maintenance of chromosomes |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YDR229W | 6 | 0 | similarity to hypothetical protein N. crassa (Class IV) |
| Cluster | BI0020: |
| YDL047W | SIT4 | 4 | 2 | ser/thr protein phosphatase |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YJR105W | ADO1 | 1 | 0 | strong similarity to human adenosine kinase (Class II) |
| YMR028W | TAP42 | 3 | 1 | component of the Tor signaling pathway |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0021: |
| YGL081W | 0 | 0 | hypothetical protein (Class V) |
| YGL081W | 0 | 0 | hypothetical protein (Class V) |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YMR309C | NIP1 | 7 | 0 | associated with 40s ribosomal subunit |
| Cluster | BI0022: |
| YPL179W | PPQ1 | 2 | 0 | phosphoprotein phosphatase |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| Cluster | BI0023: |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YFL033C | RIM15 | 0 | 0 | protein kinase involved in expression of meiotic genes |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YIL033C | BCY1 | 6 | 3 | cAMP dependent protein kinase, regulatory subunit |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YLL040C | VPS13 | 0 | 0 | involved in regulating membrane traffic |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| Cluster | BI0024: |
| YGL237C | HAP2 | 8 | 2 | CCAAT-binding factor subunit |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YFR001W | LOC1 | 0 | 0 | weak similarity to rabbit triadin SPP41P (Class III) |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YPL166W | 0 | 0 | weak similarity to paramyosins (Class III) |
| YOR358W | HAP5 | 7 | 1 | CCAAT-binding factor subunit |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YDR517W | GRH1 | 0 | 0 | Yeast (GR)ASP65 (H)omologue |
| YEL055C | POL5 | 0 | 0 | DNA polymerase V |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YPR069C | SPE3 | 0 | 0 | putrescine aminopropyltransferase (spermidine synthase) |
| YNL063W | 0 | 0 | weak similarity to Mycoplasma protoporphyrinogen oxidase (Class III) |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YDR022C | CIS1 | 3 | 1 | involved in suppression of CIK1 mutation |
| YKL214C | 0 | 0 | weak similarity to mouse transcriptional coactivator ALY (Class III) |
| YLR423C | APG17 | 62 | 2 | protein involved in authophagy |
| YPR085C | 2 | 0 | hypothetical protein (Class V) |
| YER002W | 0 | 0 | weak similarity to chicken microfibril-associated protein (Class III) |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YIL053W | RHR2 | 3 | 0 | DL-glycerol phosphatase |
| YKR028W | SAP190 | 3 | 0 | SIT4P-associated protein |
| YER126C | KRE32 | 2 | 0 | weak similarity to E.coli colicin N (Class III) |
| Cluster | BI0025: |
| YBR109C | CMD1 | 8 | 4 | calmodulin |
| YDR356W | NUF1 | 4 | 1 | spindle pole body component |
| YMR109W | MYO5 | 1 | 1 | myosin I |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YOR326W | MYO2 | 2 | 2 | myosin heavy chain |
| YGL106W | MLC1 | 2 | 1 | MYO2P light chain |
| YML057W | CMP2 | 2 | 1 | calcineurin B, catalytic subunit |
| YKL129C | MYO3 | 0 | 0 | myosin type I |
| YOR035C | SHE4 | 3 | 0 | required for mother cell-specific gene expression |
| YGL141W | HUL5 | 0 | 0 | ubiquitin-protein ligase (E3) |
| Cluster | BI0026: |
| YJL141C | YAK1 | 2 | 0 | ser/thr protein kinase |
| 0 | 0 |
| YLR270W | 2 | 0 | strong similarity to YOR173W (Class IV) |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YLL001W | DNM1 | 1 | 0 | dynamin-related protein |
| YPL247C | 0 | 0 | similarity to human HAN11 protein and petunia an11 protein (Class III) |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| Cluster | BI0027: |
| YNL094W | 3 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YNL094W | 3 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YGR196C | FYV8 | 3 | 0 | weak similarity to Tetrahymena acidic repetitive protein ARP1 (Class III) |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| Cluster | BI0028: |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YDL137W | ARF2 | 0 | 0 | GTP-binding protein of the ARF family |
| Cluster | BI0029: |
| YDR523C | SPS1 | 0 | 0 | ser/thr protein kinase |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| 0 | 0 |
| YDL134C | PPH21 | 6 | 0 | protein ser/thr phosphatase PP2A-1 |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YKR046C | 0 | 0 | hypothetical protein (Class V) |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YLL041C | SDH2 | 1 | 0 | succinate dehydrogenase iron-sulfur protein subunit |
| YDR372C | 4 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| Cluster | BI0030: |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YOR184W | SER1 | 2 | 0 | phosphoserine transaminase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| Cluster | BI0031: |
| YDL025C | 0 | 0 | similarity to probable protein kinase NPR1 (Class III) |
| YDL025C | 0 | 0 | similarity to probable protein kinase NPR1 (Class III) |
| YAL049C | 1 | 0 | weak similarity to Legionella small basic protein sbpA (Class IV) |
| YHR009C | 2 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YGR016W | 1 | 0 | weak similarity to M.jannaschii hypothetical protein MJ1317 (Class IV) |
| YHR009C | 2 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| Cluster | BI0032: |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YIL126W | STH1 | 2 | 0 | subunit of the RSC complex |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| Cluster | BI0033: |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YDR122W | KIN1 | 1 | 0 | ser/thr protein kinase |
| Cluster | BI0034: |
| YMR055C | BUB2 | 4 | 0 | cell cycle arrest protein |
| YPL040C | ISM1 | 1 | 0 | isoleucine--tRNA ligase, mitochondrial |
| Cluster | BI0035: |
| YGL163C | RAD54 | 1 | 0 | DNA-dependent ATPase of the SNF2P family |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| Cluster | BI0036: |
| YDR129C | SAC6 | 1 | 0 | actin filament bundling protein, fimbrin |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0037: |
| YNL312W | RFA2 | 3 | 0 | DNA replication factor A, 36 kDa subunit |
| YCR002C | CDC10 | 6 | 0 | cell division control protein |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YJR140C | HIR3 | 0 | 0 | involved in cell cycle regulation of histone transcription |
| Cluster | BI0038: |
| YKL190W | CNB1 | 2 | 0 | calcineurin B, regulatory subunit |
| YLR433C | CNA1 | 5 | 0 | calcineurin B, catalytic subunit |
| YML057W | CMP2 | 2 | 0 | calcineurin B, catalytic subunit |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| Cluster | BI0039: |
| YBL088C | TEL1 | 0 | 0 | telomere length control protein |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| Cluster | BI0040: |
| YPL022W | RAD1 | 2 | 0 | component of the nucleotide excision repairosome |
| YAL027W | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0041: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YOR185C | GSP2 | 2 | 0 | GTP-binding protein of the RAS superfamily |
| YDL063C | 2 | 0 | weak similarity to human estrogen-responsive finger protein (Class III) |
| YKL009W | MRT4 | 1 | 0 | mRNA turnover 4 |
| YLL018C | DPS1 | 2 | 0 | aspartyl-tRNA synthetase, cytosolic |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YLR293C | GSP1 | 12 | 0 | GTP-binding protein of the ras superfamily |
| YGL122C | NAB2 | 8 | 2 | nuclear poly(A)-binding protein |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YDR002W | YRB1 | 1 | 0 | ran-specific GTPase-activating protein |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| Cluster | BI0042: |
| YJR090C | GRR1 | 5 | 2 | required for glucose repression and for glucose and cation transport |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0043: |
| YJL128C | PBS2 | 4 | 0 | tyrosine protein kinase of the MAP kinase kinase family |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| Cluster | BI0044: |
| YBL021C | HAP3 | 4 | 0 | CCAAT-binding factor subunit |
| YML048W | GSF2 | 1 | 0 | involved in glucose repression |
| Cluster | BI0045: |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| YKL205W | LOS1 | 2 | 0 | pre-tRNA splicing protein |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YER023W | PRO3 | 5 | 0 | delta 1-pyrroline-5-carboxylate reductase |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YEL013W | VAC8 | 8 | 0 | required for vacuole inheritance and protein targeting from the cytoplasm to vacuole |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YGR279C | SCW4 | 0 | 0 | similarity to glucanase (Class III) |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| Cluster | BI0046: |
| YOR319W | HSH49 | 7 | 0 | essential yeast splicing factor |
| YER164W | CHD1 | 0 | 0 | transcriptional regulator |
| YPR188C | MLC2 | 1 | 0 | similarity to calmodulin and calmodulin-related proteins (Class III) |
| YML049C | RSE1 | 2 | 0 | involved in RNA splicing and ER to Golgi transport |
| Cluster | BI0047: |
| YNL180C | RHO5 | 1 | 0 | similarity to S.pombe CDC42P and other GTP-binding proteins (Class III) |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| Cluster | BI0048: |
| YKR036C | CAF4 | 0 | 0 | CCR4 associated factor |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| Cluster | BI0049: |
| YPL150W | 1 | 0 | similarity to ser/thr protein kinases (Class III) |
| YPL150W | 1 | 0 | similarity to ser/thr protein kinases (Class III) |
| YBR249C | ARO4 | 3 | 0 | 2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| Cluster | BI0050: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YOR177C | MPC54 | 3 | 0 | meiosis-specific component of the SPB |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YBR218C | PYC2 | 0 | 0 | pyruvate carboxylase 2 |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YBL108W | 0 | 0 | strong similarity to subtelomeric encoded proteins (Class IV) |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YHR112C | 2 | 0 | similarity to cystathionine gamma-synthases (Class III) |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YPL171C | OYE3 | 0 | 0 | NAPDH dehydrogenase (old yellow enzyme), isoform 3 |
| Cluster | BI0051: |
| YDR388W | RVS167 | 9 | 1 | reduced viability upon starvation protein |
| YCR009C | RVS161 | 4 | 1 | similarity to human amphiphysin and RVS167P (Class III) |
| Cluster | BI0052: |
| YBR103W | SIF2 | 8 | 1 | SIR4P interacting protein |
| YIL112W | 1 | 1 | similarity to ankyrin and coiled-coil proteins (Class III) |
| Cluster | BI0053: |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| YDR255C | 1 | 0 | weak similarity to hypothetical S.pombe hypothetical protein SPBC29A3 (Class IV) |
| YIL097W | FYV10 | 2 | 0 | weak similarity to erythroblast macrophage protein EMP Mus musculus (Class III) |
| YGL227W | VID30 | 0 | 0 | weak similarity to human RANBPM NP_005484.1 (Class III) |
| YIL017C | VID28 | 0 | 0 | similarity to S. pombe SPAC26H5.04 protein of unknown function (Class IV) |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| Cluster | BI0054: |
| YGR054W | 1 | 0 | similarity to C.elegans E04D5.1 protein (Class IV) |
| YGR054W | 1 | 0 | similarity to C.elegans E04D5.1 protein (Class IV) |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| Cluster | BI0055: |
| YIL131C | FKH1 | 3 | 0 | forkhead protein, involved in transcriptional silencing, cell morphology and cell cycle |
| YJL076W | NET1 | 2 | 0 | required for rDNA silencing and nucleolar integrity |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YJL197W | UBP12 | 0 | 0 | ubiquitin C-terminal hydrolase |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YMR144W | 3 | 0 | weak similarity to MLP1P (Class III) |
| YGL130W | CEG1 | 2 | 0 | mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit) |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YNL272C | SEC2 | 1 | 0 | protein transport protein |
| YNL229C | URE2 | 3 | 0 | nitrogen catabolite repression regulator |
| YIR002C | MPH1 | 2 | 0 | protection of the genome from spontaneous and chemically induced damage |
| YGR017W | 2 | 0 | weak similarity to TRCDSEMBL:AC006418_11 A. thaliana (Class IV) |
| YDL056W | MBP1 | 1 | 0 | transcription factor, subunit of the MBF factor |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YBR160W | CDC28 | 14 | 0 | cyclin-dependent protein kinase |
| YGR196C | FYV8 | 3 | 0 | weak similarity to Tetrahymena acidic repetitive protein ARP1 (Class III) |
| Cluster | BI0056: |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YGR159C | NSR1 | 1 | 0 | nuclear localization sequence binding protein |
| YJL076W | NET1 | 2 | 0 | required for rDNA silencing and nucleolar integrity |
| YHR186C | 0 | 0 | similarity to C.elegans hypothetical protein C10C5.6 (Class IV) |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YGR130C | 1 | 0 | weak similarity to myosin heavy chain proteins (Class III) |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YML049C | RSE1 | 2 | 0 | involved in RNA splicing and ER to Golgi transport |
| YGL115W | SNF4 | 10 | 0 | nuclear regulatory protein |
| YDR436W | PPZ2 | 0 | 0 | protein ser/thr phosphatase of the PP-1 family |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YPL036W | PMA2 | 2 | 0 | H+-transporting P-type ATPase, minor isoform, plasma membrane |
| Cluster | BI0057: |
| YDR480W | DIG2 | 6 | 1 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YGR040W | KSS1 | 7 | 1 | ser/thr protein kinase of the MAP kinase family |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| Cluster | BI0058: |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| Cluster | BI0059: |
| YGL174W | BUD13 | 1 | 0 | weak similarity to C.elegans hypothetical protein R08D7.1 (Class IV) |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0060: |
| YDR313C | PIB1 | 3 | 0 | phosphatidylinositol(3)-phosphate binding protein |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0061: |
| YPR137W | RRP9 | 0 | 0 | protein associated with the U3 small nucleolar RNA, required for pre-ribosomal RNA processing |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDR300C | PRO1 | 1 | 0 | glutamate 5-kinase |
| YGL146C | 0 | 0 | hypothetical protein (Class V) |
| YOL078W | 0 | 0 | similarity to stress activated MAP kinase interacting protein S. pombe (Class III) |
| YOR310C | NOP58 | 3 | 0 | required for pre-18S rRNA processing |
| Cluster | BI0062: |
| YBR288C | APM3 | 2 | 0 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YPL195W | APL5 | 1 | 0 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| Cluster | BI0063: |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YCR053W | THR4 | 0 | 0 | threonine synthase (o-p-homoserine p-lyase) |
| YJR076C | CDC11 | 6 | 4 | septin |
| YDR158W | HOM2 | 1 | 0 | aspartate-semialdehyde dehydrogenase |
| YHR107C | CDC12 | 9 | 4 | septin |
| YLR027C | AAT2 | 0 | 0 | aspartate aminotransferase, cytosolic |
| YDL225W | SHS1 | 5 | 4 | septin |
| Cluster | BI0064: |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YGL020C | 0 | 0 | weak similarity to TRCDSEMBL:SPBC543_10 putative coiled-coil protein S. pombe (Class IV) |
| YER083C | 3 | 0 | hypothetical protein (Class V) |
| Cluster | BI0065: |
| YJL092W | HPR5 | 4 | 0 | ATP-dependent DNA helicase |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YPR181C | SEC23 | 9 | 0 | component of COPII coat of ER-golgi vesicles |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| Cluster | BI0066: |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YKL099C | 0 | 0 | similarity to C.elegans hypothetical proteins C18G6.06 and C16C10.2 (Class IV) |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YKR060W | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YOR090C | PTC5 | 0 | 0 | putative 2C protein phosphatase (PP2Cs) |
| YML093W | 0 | 0 | similarity to P.falciparum liver stage antigen LSA-1 (Class III) |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YOR145C | 1 | 0 | strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein (Class IV) |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YLR409C | 1 | 1 | strong similarity to S. pombe beta-transducin (Class II) |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YER127W | LCP5 | 3 | 0 | NGG1P interacting protein |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YKL012W | PRP40 | 4 | 0 | splicing factor |
| YKR096W | 1 | 0 | similarity to mitochondrial aldehyde dehydrogenase Ald1p (Class III) |
| YLR129W | DIP2 | 0 | 0 | DOM34P-interacting protein |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| Cluster | BI0067: |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YER083C | 3 | 0 | hypothetical protein (Class V) |
| YBR014C | 4 | 0 | similarity to glutaredoxin (Class III) |
| YGL020C | 0 | 0 | weak similarity to TRCDSEMBL:SPBC543_10 putative coiled-coil protein S. pombe (Class IV) |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| Cluster | BI0068: |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YNL311C | 3 | 0 | hypothetical protein (Class V) |
| Cluster | BI0069: |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| YAR007C | RFA1 | 4 | 0 | DNA replication factor A, 69 KD subunit |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| Cluster | BI0070: |
| YDR436W | PPZ2 | 0 | 0 | protein ser/thr phosphatase of the PP-1 family |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YOR054C | 1 | 0 | similarity to SIS2P protein and C.tropicalis hal3protein (Class III) |
| Cluster | BI0071: |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YNL113W | RPC19 | 7 | 1 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| Cluster | BI0072: |
| YLR293C | GSP1 | 12 | 1 | GTP-binding protein of the ras superfamily |
| YJR074W | MOG1 | 2 | 2 | GSP1-interacting protein |
| YOR185C | GSP2 | 2 | 1 | GTP-binding protein of the RAS superfamily |
| YDR002W | YRB1 | 1 | 0 | ran-specific GTPase-activating protein |
| Cluster | BI0073: |
| YBR274W | CHK1 | 4 | 0 | regulats inhibitory Cdk phosphorylation of PDS1 |
| YPR124W | CTR1 | 0 | 0 | copper transport protein |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| Cluster | BI0074: |
| YMR001C | CDC5 | 3 | 0 | involved in regulation of DNA replication |
| YFL008W | SMC1 | 6 | 1 | chromosome segregation protein |
| YDL003W | MCD1 | 2 | 1 | Mitotic Chromosome Determinant |
| Cluster | BI0075: |
| YDR283C | GCN2 | 0 | 0 | ser/thr protein kinase |
| YNL213C | 0 | 0 | similarity to hypothetical protein Neurospora crassa (Class IV) |
| Cluster | BI0076: |
| YGL220W | 3 | 1 | weak similarity to V.alginolyticus bolA protein (Class III) |
| YGL220W | 3 | 1 | weak similarity to V.alginolyticus bolA protein (Class III) |
| YER174C | GRX4 | 0 | 0 | member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5) |
| YDR098C | GRX3 | 3 | 1 | member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5) |
| YLL029W | 0 | 0 | similarity to M.jannaschii X-Pro dipeptidase and S.pombe hypothetical protein (Class III) |
| Cluster | BI0077: |
| YJR053W | BFA1 | 1 | 0 | spindle assembly checkpoint protein |
| YLR389C | STE23 | 1 | 0 | protease involved in a-factor processing |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YNL238W | KEX2 | 0 | 0 | endoproteinase of late golgi compartment |
| Cluster | BI0078: |
| YLR262C | YPT6 | 1 | 0 | GTP-binding protein of the rab family |
| 0 | 0 |
| YDR137W | RGP1 | 0 | 0 | reduced growth phenotype protein |
| YLR039C | RIC1 | 0 | 0 | involved in transcription of ribosomal proteins and ribosomal RNA |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| Cluster | BI0079: |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YNL278W | CAF120 | 0 | 0 | similarity to YLR187W (Class IV) |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| YHR074W | QNS1 | 1 | 0 | weak similarity to B.subtilis spore outgrowth factor B (Class III) |
| Cluster | BI0080: |
| YFR014C | CMK1 | 1 | 1 | Ca2+/calmodulin-dependent ser/thr protein kinase type I |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YKL119C | VPH2 | 2 | 0 | H+-ATPase assembly protein |
| Cluster | BI0081: |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YAL016W | TPD3 | 3 | 1 | ser/thr protein phosphatase 2A, regulatory chain A |
| YDL134C | PPH21 | 6 | 1 | protein ser/thr phosphatase PP2A-1 |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| Cluster | BI0082: |
| YGR280C | 3 | 0 | weak similarity to CBF5P (Class III) |
| YGR280C | 3 | 0 | weak similarity to CBF5P (Class III) |
| YMR302C | PRP12 | 1 | 0 | involved in early maturation of pre-rRNA |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| Cluster | BI0083: |
| YAL036C | FUN11 | 5 | 0 | strong similarity to GTP-binding proteins (Class II) |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0084: |
| YJL044C | GYP6 | 2 | 0 | GTPase-activating protein |
| YDR407C | TRS120 | 9 | 0 | TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| Cluster | BI0085: |
| YKL095W | YJU2 | 2 | 0 | similarity to C.elegans hypothetical proteins (Class IV) |
| 0 | 0 |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YKL067W | YNK1 | 3 | 0 | nucleoside diphosphate kinase |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YLL036C | PRP19 | 1 | 0 | non-snRNP sliceosome component required for DNA repair |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| Cluster | BI0086: |
| YDL164C | CDC9 | 1 | 0 | DNA ligase |
| YLR276C | DBP9 | 1 | 0 | similarity to YDL031W, MAK5P and RNA helicases (Class III) |
| YBR088C | POL30 | 1 | 0 | Proliferating Cell Nuclear Antigen (PCNA) |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YOR378W | 1 | 0 | strong similarity to aminotriazole resistance protein (Class II) |
| Cluster | BI0087: |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR210C | 1 | 0 | similarity to M.jannaschii GTP-binding protein and to M.capricolum hypothetical protein SGC3 (Class IV) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| Cluster | BI0088: |
| YJR076C | CDC11 | 6 | 3 | septin |
| YHR107C | CDC12 | 9 | 3 | septin |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YLR314C | CDC3 | 5 | 3 | cell division control protein |
| YCR002C | CDC10 | 6 | 3 | cell division control protein |
| Cluster | BI0089: |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YER172C | BRR2 | 2 | 0 | RNA helicase-related protein |
| Cluster | BI0090: |
| YPL236C | 0 | 0 | similarity to PRK1P, and serine/threonine protein kinase homolog from A. thaliana (Class III) |
| YPL236C | 0 | 0 | similarity to PRK1P, and serine/threonine protein kinase homolog from A. thaliana (Class III) |
| YDL190C | UFD2 | 1 | 0 | ubiquitin fusion degradation protein |
| Cluster | BI0091: |
| YDL013W | HEX3 | 6 | 0 | hexose metabolism-related protein |
| YLR006C | SSK1 | 4 | 1 | two-component signal transducer |
| YNR031C | SSK2 | 1 | 1 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| Cluster | BI0092: |
| YPL031C | PHO85 | 14 | 1 | cyclin-dependent protein kinase |
| YFL030W | 2 | 0 | similarity to several transaminases (Class III) |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| YIL050W | PCL7 | 6 | 1 | cyclin like protein interacting with PHO85P |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| Cluster | BI0093: |
| YMR199W | CLN1 | 5 | 1 | cyclin, G1/S-specific |
| YBR135W | CKS1 | 10 | 1 | cyclin-dependent kinases regulatory subunit |
| YBR160W | CDC28 | 14 | 2 | cyclin-dependent protein kinase |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| Cluster | BI0094: |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YER002W | 0 | 0 | weak similarity to chicken microfibril-associated protein (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YGL023C | PIB2 | 1 | 0 | phosphatidylinositol 3-phosphate binding |
| YLR449W | FPR4 | 4 | 0 | nucleolar peptidylprolyl cis-trans isomerase (PPIase) |
| YER120W | SCS2 | 0 | 0 | required for inositol metabolism |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YKL172W | EBP2 | 0 | 0 | required for pre-rRNA processing and ribosomal subunit assembly |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YPL258C | THI21 | 1 | 0 | similarity to B.subtilis transcriptional activator tenA, and strong similarity to hypothetical proteins YOL055C and YPR121W (Class III) |
| YLR002C | 2 | 0 | similarity to hypothetical C. elegans protein (Class IV) |
| YLR300W | EXG1 | 0 | 0 | exo-beta-1,3-glucanase (I/II), major isoform |
| YNL002C | RLP7 | 0 | 0 | strong similarity to mammalian ribosomal L7 proteins (Class II) |
| YNL110C | 1 | 0 | weak similarity to fruit fly RNA-binding protein (Class III) |
| YDR412W | 2 | 0 | questionable ORF (Class VI) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YKL009W | MRT4 | 1 | 0 | mRNA turnover 4 |
| Cluster | BI0095: |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YLR129W | DIP2 | 0 | 0 | DOM34P-interacting protein |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| YJL069C | 1 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YDR106W | ARP10 | 1 | 0 | similarity to Actin proteins (Class III) |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YPL265W | DIP5 | 1 | 0 | dicarboxylic amino acid permease |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YBR057C | MUM2 | 4 | 0 | meiotic protein |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| Cluster | BI0096: |
| YLR306W | UBC12 | 1 | 0 | E2 ubiquitin-conjugating enzyme |
| YPL003W | ULA1 | 3 | 0 | involved in protein modification |
| Cluster | BI0097: |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| Cluster | BI0098: |
| YOR229W | WTM2 | 3 | 0 | transcriptional modulator |
| YOR230W | WTM1 | 1 | 0 | transcriptional modulator |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YOR283W | 0 | 0 | weak similarity to phosphoglycerate mutases (Class III) |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0099: |
| YCR002C | CDC10 | 6 | 3 | cell division control protein |
| YJR076C | CDC11 | 6 | 3 | septin |
| YGL105W | ARC1 | 2 | 0 | protein with specific affinity for G4 quadruplex nucleic acids |
| YHR107C | CDC12 | 9 | 3 | septin |
| YLR314C | CDC3 | 5 | 3 | cell division control protein |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| Cluster | BI0100: |
| YIR001C | SGN1 | 2 | 1 | similarity to D.melanogaster RNA binding protein (Class III) |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YGR250C | 3 | 1 | weak similarity to human cleavage stimulation factor 64K chain (Class III) |
| Cluster | BI0101: |
| YGL244W | RTF1 | 1 | 0 | regulates DNA binding properties of TBP |
| YHR009C | 2 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YBR081C | SPT7 | 13 | 0 | involved in alteration of transcription start site selection |
| Cluster | BI0102: |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YNL040W | 0 | 0 | weak similarity to M.genitalium alanine--tRNA ligase (Class III) |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YJR065C | ARP3 | 6 | 3 | actin related protein |
| YML069W | POB3 | 3 | 0 | protein that binds to DNA polymerase I (PolI) |
| YMR309C | NIP1 | 7 | 0 | associated with 40s ribosomal subunit |
| YLR241W | 3 | 0 | similarity to hypothetical S.pombe protein SPAC2G11.09 (Class IV) |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| Cluster | BI0103: |
| YOL100W | PKH2 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| YGR033C | 3 | 0 | weak similarity to TRCDSEMBLNEW:AP002861_10 Oryza sativa (Class IV) |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| Cluster | BI0104: |
| YPL022W | RAD1 | 2 | 0 | component of the nucleotide excision repairosome |
| YLR430W | SEN1 | 1 | 0 | positive effector of tRNA-splicing endonuclease |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YAL027W | 0 | 0 | hypothetical protein (Class V) |
| YIL068C | SEC6 | 1 | 0 | protein transport protein |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YHL007C | STE20 | 3 | 0 | ser/thr protein kinase of the pheromone pathway |
| YOL059W | GPD2 | 2 | 0 | glycerol-3-phosphate dehydrogenase (NAD+), mitochondrial |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YLR368W | 9 | 0 | weak similarity to Mus musculus F-box protein FBA (Class IV) |
| YDL022W | GPD1 | 0 | 0 | glycerol-3-phosphate dehydrogenase (NAD+), cytoplasmic |
| YLR430W | SEN1 | 1 | 0 | positive effector of tRNA-splicing endonuclease |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YJL157C | FAR1 | 6 | 0 | cyclin-dependent kinase inhibitor (CKI) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| Cluster | BI0105: |
| YJL044C | GYP6 | 2 | 0 | GTPase-activating protein |
| YMR218C | TRS130 | 9 | 1 | TRAPP subunit of 130 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR407C | TRS120 | 9 | 1 | TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| Cluster | BI0106: |
| YER095W | RAD51 | 11 | 0 | DNA repair protein |
| YMR167W | MLH1 | 4 | 0 | DNA mismatch repair protein |
| Cluster | BI0107: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YGL122C | NAB2 | 8 | 2 | nuclear poly(A)-binding protein |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| Cluster | BI0108: |
| YLR074C | BUD20 | 1 | 0 | weak similarity to human zinc finger protein (Class III) |
| YDR036C | 0 | 0 | similarity to enoyl CoA hydratase (Class III) |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YPL013C | 3 | 0 | strong similarity to N.crassa mitochondrial ribosomal protein S24 (Class II) |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YER126C | KRE32 | 2 | 0 | weak similarity to E.coli colicin N (Class III) |
| YJL122W | 0 | 0 | weak similarity to dog-fish transition protein S2 (Class III) |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YBL044W | 1 | 0 | hypothetical protein (Class V) |
| YLR397C | AFG2 | 2 | 0 | strong similarity to CDC48 (Class II) |
| YDR175C | RSM24 | 1 | 0 | component of the mitochondrial ribosomal small subunit |
| YHR059W | FYV4 | 1 | 0 | weak similarity to Ustilago hordei B east mating protein 2 (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YNL175C | NOP13 | 2 | 0 | similarity to S.pombe Rnp24p, NSR1P and human splicing factor (Class III) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| YIL093C | RSM25 | 0 | 0 | weak similarity to S.pombe hypothetical protein SPBC16A3 (Class IV) |
| YGL068W | 0 | 0 | strong similarity to Cricetus mitochrondial ribosomal L12 protein (Class II) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| Cluster | BI0109: |
| YOR090C | PTC5 | 0 | 0 | putative 2C protein phosphatase (PP2Cs) |
| YHL011C | PRS3 | 3 | 0 | ribose-phosphate pyrophosphokinase |
| Cluster | BI0110: |
| YPL074W | YTA6 | 1 | 1 | similarity to VPS4P and YER047C (Class III) |
| 0 | 0 |
| YPL004C | 4 | 1 | strong similarity to YGR086C (Class IV) |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| Cluster | BI0111: |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| Cluster | BI0112: |
| YDL220C | CDC13 | 2 | 0 | cell division control protein |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| Cluster | BI0113: |
| YBR217W | APG12 | 11 | 1 | component of the autophagic system |
| YGL105W | ARC1 | 2 | 1 | protein with specific affinity for G4 quadruplex nucleic acids |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YMR056C | AAC1 | 2 | 0 | ADP/ATP carrier protein (MCF) |
| YBR166C | TYR1 | 1 | 0 | prephenate dehydrogenase (NADP+) |
| YLR423C | APG17 | 62 | 1 | protein involved in authophagy |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YOR086C | 0 | 0 | weak similarity to synaptogamines (Class III) |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YGL245W | 3 | 1 | strong similarity to glutamine--tRNA ligase (Class II) |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| 0 | 0 |
| YFR004W | RPN11 | 3 | 0 | 26S proteasome regulatory subunit |
| YNL208W | 1 | 0 | weak similarity to Colletotrichum gloeosporioides nitrogen starvation-induced glutamine rich protein (Class III) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YHR076W | 0 | 0 | weak similarity to C.elegans hypothetical protein CEW09D10 (Class IV) |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YBR080C | SEC18 | 1 | 0 | vesicular-fusion protein, functional homolog of NSF |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YHR201C | PPX1 | 1 | 0 | exopolyphosphatase |
| YLR059C | REX2 | 1 | 0 | putative 3'-5' exonuclease |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YPR049C | CVT9 | 2 | 0 | similarity to USO1P (Class III) |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| Cluster | BI0114: |
| YDR076W | RAD55 | 2 | 0 | DNA repair protein |
| YBL056W | PTC3 | 2 | 0 | ser/thr protein phosphatase PP2C |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| Cluster | BI0115: |
| YBL036C | 0 | 0 | strong similarity to C.elegans hypothetical protein (Class IV) |
| YBL036C | 0 | 0 | strong similarity to C.elegans hypothetical protein (Class IV) |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YOL078W | 0 | 0 | similarity to stress activated MAP kinase interacting protein S. pombe (Class III) |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| Cluster | BI0116: |
| YKL161C | (MLP1) | 1 | 0 | strong similarity to ser/thr-specific protein kinase SLT2P (Class II) |
| YKL161C | (MLP1) | 1 | 0 | strong similarity to ser/thr-specific protein kinase SLT2P (Class II) |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| Cluster | BI0117: |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YDL084W | SUB2 | 1 | 0 | probably involved in pre-mRNA splicing |
| YML062C | MFT1 | 1 | 0 | mitochondrial fusion target protein |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| Cluster | BI0118: |
| YIL095W | PRK1 | 0 | 0 | serine/threonine protein kinase involved in regulation of actin cytoskeleton organization |
| YBR059C | AKL1 | 7 | 0 | Ark-family Kinase-Like protein |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| Cluster | BI0119: |
| YMR104C | YPK2 | 3 | 0 | ser/thr protein kinase |
| 0 | 0 |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YGR016W | 1 | 0 | weak similarity to M.jannaschii hypothetical protein MJ1317 (Class IV) |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YDR477W | SNF1 | 10 | 0 | carbon catabolite derepressing ser/thr protein kinase |
| YEL023C | 2 | 0 | similarity to hypothetical protein PA2063 - Pseudomonas aeruginosa (Class IV) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YBL080C | PET112 | 1 | 0 | required to maintain rho+ mitochondrial DNA |
| Cluster | BI0120: |
| YHR196W | 0 | 0 | weak similarity to YDR398W (Class IV) |
| YHR196W | 0 | 0 | weak similarity to YDR398W (Class IV) |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YER120W | SCS2 | 0 | 0 | required for inositol metabolism |
| YDR074W | TPS2 | 6 | 0 | alpha,alpha-trehalose-phosphate synthase, 102 KD subunit |
| Cluster | BI0121: |
| YNL135C | FPR1 | 4 | 1 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YER052C | HOM3 | 6 | 1 | L-aspartate 4-P-transferase |
| Cluster | BI0122: |
| YNL098C | RAS2 | 3 | 0 | GTP-binding protein |
| YOR101W | RAS1 | 4 | 0 | GTP-binding protein |
| Cluster | BI0123: |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| Cluster | BI0124: |
| YBR280C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YBR280C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YNL141W | AAH1 | 3 | 0 | adenosine deaminase |
| YBR139W | 1 | 0 | strong similarity to carboxypeptidase (Class II) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| Cluster | BI0125: |
| YOR276W | CAF20 | 3 | 1 | mRNA CAP-binding protein (eIF4F), 20K subunit |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YER027C | GAL83 | 3 | 0 | glucose repression protein |
| YOL139C | CDC33 | 5 | 1 | translation initiation factor eIF4E |
| Cluster | BI0126: |
| YCR084C | TUP1 | 3 | 1 | general transcription repressor |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YBR112C | CYC8 | 4 | 1 | general repressor of transcription |
| YJL156C | SSY5 | 0 | 0 | part of an extracellular amino acid sensor |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YLR313C | SPH1 | 6 | 0 | required for bipolar bud site selection |
| Cluster | BI0127: |
| YPL194W | DDC1 | 3 | 1 | DNA damage checkpoint protein |
| YLR288C | MEC3 | 82 | 1 | G2-specific checkpoint protein |
| YOL094C | RFC4 | 1 | 0 | DNA replication factor C, 37 kDa subunit |
| YLR288C | MEC3 | 82 | 1 | G2-specific checkpoint protein |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| Cluster | BI0128: |
| YPR111W | DBF20 | 3 | 1 | cell cycle protein kinase related to DBF2P |
| YPR122W | AXL1 | 1 | 0 | protease |
| YIL106W | MOB1 | 9 | 1 | required for completion of mitosis and maintenance of ploidy |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YOR335C | ALA1 | 0 | 0 | alanyl-tRNA synthetase, cytosolic |
| Cluster | BI0129: |
| YJR068W | RFC2 | 2 | 0 | DNA replication factor C, 41 KD subunit |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YER172C | BRR2 | 2 | 0 | RNA helicase-related protein |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YEL013W | VAC8 | 8 | 0 | required for vacuole inheritance and protein targeting from the cytoplasm to vacuole |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YBL015W | ACH1 | 0 | 0 | acetyl-CoA hydrolase |
| YLR371W | ROM2 | 2 | 0 | GDP/GTP exchange factor for RHO1P |
| Cluster | BI0130: |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YER049W | 2 | 0 | strong similarity to hypothetical S.pombe protein YER049W (Class IV) |
| YBL030C | PET9 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YCR009C | RVS161 | 4 | 0 | similarity to human amphiphysin and RVS167P (Class III) |
| YLR100W | ERG27 | 1 | 0 | 3-keto sterol reductase |
| YHR018C | ARG4 | 1 | 0 | arginosuccinate lyase |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YJR070C | 1 | 0 | similarity to C.elegans hypothetical protein C14A4.1 (Class IV) |
| YDL204W | 3 | 0 | similarity to hypothetical protein YDR233C (Class IV) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YDR429C | TIF35 | 6 | 1 | translation initiation factor eIF3 (p33 subunit) |
| YKL029C | MAE1 | 2 | 0 | malic enzyme |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YBR080C | SEC18 | 1 | 0 | vesicular-fusion protein, functional homolog of NSF |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YIL124W | AYR1 | 2 | 0 | 1-Acyldihydroxyacetone-phosphate reductase |
| YIL136W | OM45 | 1 | 0 | protein of the outer mitochondrial membrane |
| YNL181W | 0 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YKR067W | GPT2 | 0 | 0 | strong similarity to SCT1P (Class II) |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YKR046C | 0 | 0 | hypothetical protein (Class V) |
| YGR202C | PCT1 | 0 | 0 | cholinephosphate cytidylyltransferase |
| YMR146C | TIF34 | 4 | 1 | translation initiation factor eIF3, p39 subunit |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YER178W | PDA1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) alpha chain precursor |
| YER023W | PRO3 | 5 | 0 | delta 1-pyrroline-5-carboxylate reductase |
| Cluster | BI0131: |
| YPR015C | 0 | 0 | similarity to transcription factors (Class III) |
| YPR015C | 0 | 0 | similarity to transcription factors (Class III) |
| YHR046C | 0 | 0 | similarity to inositolmonophosphatases (Class III) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| Cluster | BI0132: |
| YLL010C | PSR1 | 1 | 1 | plasma membrane phosphatase involved in sodium stress response |
| YOR043W | WHI2 | 5 | 1 | growth regulation protein |
| Cluster | BI0133: |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0134: |
| YNL161W | CBK1 | 2 | 0 | strong similarity to U.maydis Ukc1p protein kinase (Class II) |
| YDR293C | SSD1 | 0 | 0 | involved in the tolerance to high concentration of Ca2+ |
| YOR007C | SGT2 | 5 | 0 | similarity to protein phosphatases (Class III) |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| Cluster | BI0135: |
| YMR205C | PFK2 | 1 | 1 | 6-phosphofructokinase, beta subunit |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YGR240C | PFK1 | 3 | 1 | 6-phosphofructokinase, alpha subunit |
| Cluster | BI0136: |
| YDL195W | SEC31 | 4 | 0 | component of the COPII coat of ER-golgi vesicles |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| Cluster | BI0137: |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YGL200C | EMP24 | 4 | 0 | component of the COPII-coated vesicles, 24 kDa |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| Cluster | BI0138: |
| YPL259C | APM1 | 2 | 0 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YKL010C | UFD4 | 1 | 0 | similarity to rat ubiquitin ligase Nedd4 (Class III) |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YBL104C | 1 | 0 | weak similarity to S.pombe hypothetical protein SPAC12G12.01c (Class IV) |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0139: |
| YDR488C | PAC11 | 2 | 0 | required in the absence of CIN8P |
| YDR424C | DYN2 | 0 | 0 | dynein light chain 1, cytosolic |
| YBL064C | 0 | 0 | strong similarity to thiol-specific antioxidant enzyme (Class II) |
| Cluster | BI0140: |
| YER179W | DMC1 | 15 | 0 | meiosis-specific protein |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| Cluster | BI0141: |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| 0 | 0 |
| YER094C | PUP3 | 2 | 0 | 20S proteasome subunit (beta3) |
| YHR008C | SOD2 | 2 | 0 | superoxide dismutase (Mn) precursor, mitochondrial |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YML022W | APT1 | 3 | 0 | adenine phosphoribosyltransferase |
| Cluster | BI0142: |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YJL117W | PHO86 | 4 | 0 | inorganic phospate transporter |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| Cluster | BI0143: |
| YFL014W | HSP12 | 0 | 0 | heat shock protein |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0144: |
| YPR165W | RHO1 | 8 | 0 | GTP-binding protein of the rho subfamily of ras-like proteins |
| YEL071W | DLD3 | 0 | 0 | D-lactate dehydrogenase |
| YLR153C | ACS2 | 2 | 0 | acetyl-coenzyme A synthetase |
| YJR016C | ILV3 | 0 | 0 | dihydroxy-acid dehydratase |
| YPL028W | ERG10 | 0 | 0 | acetyl-CoA C-acetyltransferase, cytosolic |
| YOR230W | WTM1 | 1 | 0 | transcriptional modulator |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YPL262W | FUM1 | 0 | 0 | fumarate hydratase |
| YFR044C | 0 | 0 | similarity to hypothetical protein YBR281C (Class IV) |
| Cluster | BI0145: |
| YCR001W | 1 | 0 | weak similarity to chloride channel proteins (Class III) |
| YCR001W | 1 | 0 | weak similarity to chloride channel proteins (Class III) |
| YEL037C | RAD23 | 6 | 0 | nucleotide excision repair protein (ubiquitin-like protein) |
| Cluster | BI0146: |
| YIL046W | MET30 | 12 | 2 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| Cluster | BI0147: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| Cluster | BI0148: |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YNL182C | 4 | 0 | weak similarity to S.pombe hypothetical protein (Class IV) |
| YCL014W | BUD3 | 2 | 0 | budding protein |
| YNL113W | RPC19 | 7 | 0 | DNA-directed RNA polymerase I,III 16 KD subunit |
| Cluster | BI0149: |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| Cluster | BI0150: |
| YGR223C | 1 | 0 | weak similarity to hypothetical protein YFR021W (Class IV) |
| YGR223C | 1 | 0 | weak similarity to hypothetical protein YFR021W (Class IV) |
| YPL028W | ERG10 | 0 | 0 | acetyl-CoA C-acetyltransferase, cytosolic |
| Cluster | BI0151: |
| YPL164C | MLH3 | 0 | 0 | insertion and deletion mismatch repair protein |
| YPR191W | QCR2 | 6 | 0 | ubiquinol--cytochrome-c reductase 40KD chain II |
| Cluster | BI0152: |
| YGL116W | CDC20 | 2 | 0 | cell division control protein |
| YJL013C | MAD3 | 5 | 0 | spindle-assembly checkpoint protein |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YPL140C | MKK2 | 5 | 0 | protein kinase of the map kinase kinase (MEK) family |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0153: |
| YMR022W | QRI8 | 2 | 0 | E2 ubiquitin-conjugation enzyme |
| 0 | 0 |
| YLR006C | SSK1 | 4 | 1 | two-component signal transducer |
| YNR031C | SSK2 | 1 | 1 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| Cluster | BI0154: |
| YOR174W | MED4 | 11 | 0 | transcription regulation mediator |
| YMR102C | 3 | 0 | strong similarity to YKL121W (Class IV) |
| Cluster | BI0155: |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YPR191W | QCR2 | 6 | 0 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| Cluster | BI0156: |
| YER112W | LSM4 | 14 | 1 | Sm-like (Lsm) protein |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YCR077C | PAT1 | 20 | 1 | topoisomerase II-associated protein |
| YDR238C | SEC26 | 1 | 0 | coatomer complex beta chain of secretory pathway vesicles |
| Cluster | BI0157: |
| YBR217W | APG12 | 11 | 0 | component of the autophagic system |
| YGR218W | CRM1 | 38 | 0 | nuclear export factor, exportin |
| YFR030W | MET10 | 0 | 0 | sulfite reductase flavin-binding subunit |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| YGL016W | KAP122 | 4 | 0 | Member of the karyopherin-beta family, nuclear import |
| Cluster | BI0158: |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YDR141C | DOP1 | 0 | 0 | strong similarity to Emericella nidulans developmental regulatory gene, dopey (dopA) (Class II) |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YGL016W | KAP122 | 4 | 0 | Member of the karyopherin-beta family, nuclear import |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YKL218C | SRY1 | 0 | 0 | strong similarity to E.coli and H.influenzae threonine dehydratases (Class II) |
| YER138C | 0 | 0 |
| YPR010C | RPA135 | 5 | 1 | DNA-directed RNA polymerase I, 135 KD subunit |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| Cluster | BI0159: |
| YLR175W | CBF5 | 4 | 1 | putative rRNA pseuduridine synthase |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| YNL124W | 5 | 1 | similarity to hypothetical S. pombe protein (Class IV) |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| Cluster | BI0160: |
| YMR093W | 2 | 0 | weak similarity to PWP2P (Class III) |
| YMR093W | 2 | 0 | weak similarity to PWP2P (Class III) |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YGL171W | ROK1 | 1 | 0 | ATP-dependent RNA helicase |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| Cluster | BI0161: |
| YER054C | GIP2 | 1 | 0 | GLC7P-interacting protein |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YLR258W | GSY2 | 5 | 0 | UDP-glucose--starch glucosyltransferase, isoform 2 |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YPR184W | GDB1 | 1 | 0 | similarity to human 4-alpha-glucanotransferase (EC 2.4.1.25)/amylo-1,6-glucosidase (EC 3.2.1.33) (Class III) |
| Cluster | BI0162: |
| YPL003W | ULA1 | 3 | 0 | involved in protein modification |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| Cluster | BI0163: |
| YBR203W | 1 | 0 | hypothetical protein (Class V) |
| YBR203W | 1 | 0 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0164: |
| YOL054W | 0 | 0 | weak similarity to transcription factors (Class III) |
| YOL054W | 0 | 0 | weak similarity to transcription factors (Class III) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YGL207W | SPT16 | 3 | 1 | general chromatin factor |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YCR030C | 5 | 0 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 (Class IV) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YCR030C | 5 | 0 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 (Class IV) |
| YOR178C | GAC1 | 5 | 0 | ser/thr phosphoprotein phosphatase 1, regulatory chain |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YLL019C | KNS1 | 1 | 0 | ser/thr protein kinase |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YML069W | POB3 | 3 | 1 | protein that binds to DNA polymerase I (PolI) |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| Cluster | BI0165: |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YMR092C | AIP1 | 4 | 0 | actin cytoskeleton component |
| YGL179C | TOS3 | 1 | 0 | strong similarity to PAK1P, ELM1P and KIN82P (Class II) |
| YGL241W | KAP114 | 1 | 0 | Member of the karyopherin-beta family, nuclear import |
| YJL005W | CYR1 | 1 | 1 | adenylate cyclase |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| YLR059C | REX2 | 1 | 0 | putative 3'-5' exonuclease |
| YNL138W | SRV2 | 3 | 1 | adenylate cyclase-associated protein, 70kDa |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| Cluster | BI0166: |
| YMR146C | TIF34 | 4 | 0 | translation initiation factor eIF3, p39 subunit |
| YBR079C | RPG1 | 2 | 0 | translation initiation factor eIF3 (p110 subunit) |
| Cluster | BI0167: |
| YDR113C | PDS1 | 2 | 0 | cell cycle regulator |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| Cluster | BI0168: |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YMR209C | 1 | 0 | similarity to conserved hypothetical protein S. pombe (Class IV) |
| YPR040W | SDF1 | 8 | 0 | similarity to C.elegans C02C2.6 protein (Class IV) |
| YBR208C | DUR1,2 | 0 | 0 | urea amidolyase |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| Cluster | BI0169: |
| YNL135C | FPR1 | 4 | 1 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YGR204W | ADE3 | 1 | 0 | C1-tetrahydrofolate synthase (trifunctional enzyme),cytoplasmic |
| YDR341C | JUNK | 1 | 0 | arginyl-tRNA synthetase, cytosolic |
| YOR335C | ALA1 | 0 | 0 | alanyl-tRNA synthetase, cytosolic |
| YKL216W | URA1 | 0 | 0 | dihydroorotate dehydrogenase |
| YER052C | HOM3 | 6 | 1 | L-aspartate 4-P-transferase |
| YIL149C | MLP2 | 0 | 0 | involved in translocation of macromolecules between the nucleoplasm and the NPC |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YIL078W | THS1 | 1 | 0 | threonyl tRNA synthetase, cytosolic |
| Cluster | BI0170: |
| YNL311C | 3 | 1 | hypothetical protein (Class V) |
| YNL311C | 3 | 1 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YHR115C | 5 | 0 | strong similarity to hypothetical protein YNL116W (Class IV) |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YGR175C | ERG1 | 0 | 0 | squalene monooxygenase |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0171: |
| YKL048C | ELM1 | 0 | 0 | ser/thr-specific protein kinase |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| Cluster | BI0172: |
| YBR195C | MSI1 | 3 | 0 | chromatin assembly complex, subunit p50 |
| YKR029C | 1 | 0 | similarity to YJL105W and Lentinula MFBA protein (Class III) |
| Cluster | BI0173: |
| YLR097C | 1 | 1 | weak similarity to H. sapiens F-box protein (Class III) |
| YLR097C | 1 | 1 | weak similarity to H. sapiens F-box protein (Class III) |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YLR289W | GUF1 | 0 | 0 | strong similarity to E. coli elongation factor-type GTP-binding protein lepa (Class II) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| Cluster | BI0174: |
| YJL149W | 0 | 0 | similarity to hypothetical protein YDR131C (Class IV) |
| YJL149W | 0 | 0 | similarity to hypothetical protein YDR131C (Class IV) |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| Cluster | BI0175: |
| YJR090C | GRR1 | 5 | 2 | required for glucose repression and for glucose and cation transport |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| Cluster | BI0176: |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YBL049W | 3 | 0 | strong similarity to hypothetical protein - human (Class IV) |
| YIL097W | FYV10 | 2 | 0 | weak similarity to erythroblast macrophage protein EMP Mus musculus (Class III) |
| YDL225W | SHS1 | 5 | 0 | septin |
| YBR105C | VID24 | 1 | 0 | required for vacuolar import and degradation of FBP1P |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| YDR255C | 1 | 0 | weak similarity to hypothetical S.pombe hypothetical protein SPBC29A3 (Class IV) |
| Cluster | BI0177: |
| YER020W | GPA2 | 2 | 0 | guanine nucleotide-binding regulatory protein |
| YMR029C | 0 | 0 | weak similarity to human nuclear autoantigen (Class III) |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| Cluster | BI0178: |
| YML058W | SML1 | 3 | 0 | protein inhibitor of ribonucleotide reductase |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YJR140C | HIR3 | 0 | 0 | involved in cell cycle regulation of histone transcription |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YGL062W | PYC1 | 0 | 0 | pyruvate carboxylase 1 |
| YER062C | HOR2 | 2 | 0 | DL-glycerol phosphatase |
| YDL040C | NAT1 | 0 | 0 | protein N-acetyltransferase subunit |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YMR083W | ADH3 | 2 | 0 | alcohol dehydrogenase III |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| Cluster | BI0179: |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| YLR421C | RPN13 | 1 | 0 | weak similarity to human 42K membrane glycoprotein (Class III) |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 2 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| YOR259C | RPT4 | 3 | 2 | 26S proteasome regulatory subunit |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| Cluster | BI0180: |
| YFR021W | NMR1 | 1 | 0 | similarity to hypothetical protein YPL100W (Class IV) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| Cluster | BI0181: |
| YOR125C | CAT5 | 0 | 0 | involved in coenzyme Q (ubiquinone) biosynthesis |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YGL192W | IME4 | 2 | 0 | positive transcription factor for IME2 |
| Cluster | BI0182: |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| YJR065C | ARP3 | 6 | 0 | actin related protein |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YOR367W | SCP1 | 0 | 0 | similarity to mammalian smooth muscle protein SM22 and chicken calponin alpha (Class III) |
| YCR084C | TUP1 | 3 | 0 | general transcription repressor |
| YHR016C | YSC84 | 5 | 0 | strong similarity to hypothetical protein YFR024C-A (Class IV) |
| YDR523C | SPS1 | 0 | 0 | ser/thr protein kinase |
| Cluster | BI0183: |
| YLR383W | RHC18 | 0 | 0 | recombination repair protein |
| YAR073W | IMD1 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| Cluster | BI0184: |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YOR061W | CKA2 | 4 | 1 | casein kinase II alpha' chain |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YCL054W | SPB1 | 3 | 1 | required for ribosome synthesis, putative methylase |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YPR143W | 0 | 0 | hypothetical protein (Class V) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YDL031W | DBP10 | 0 | 0 | putative RNA helicase involved in ribosome biogenesis |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YOR039W | CKB2 | 9 | 1 | casein kinase II beta' chain |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| Cluster | BI0185: |
| YBL049W | 3 | 0 | strong similarity to hypothetical protein - human (Class IV) |
| YBL049W | 3 | 0 | strong similarity to hypothetical protein - human (Class IV) |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| YIL017C | VID28 | 0 | 0 | similarity to S. pombe SPAC26H5.04 protein of unknown function (Class IV) |
| YGL227W | VID30 | 0 | 0 | weak similarity to human RANBPM NP_005484.1 (Class III) |
| YIL097W | FYV10 | 2 | 0 | weak similarity to erythroblast macrophage protein EMP Mus musculus (Class III) |
| YDR255C | 1 | 0 | weak similarity to hypothetical S.pombe hypothetical protein SPBC29A3 (Class IV) |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| Cluster | BI0186: |
| YBR175W | SWD3 | 6 | 0 | similarity to S.pombe beta-transducin (Class III) |
| YBR175W | SWD3 | 6 | 0 | similarity to S.pombe beta-transducin (Class III) |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YOL045W | 0 | 0 | similarity to ser/thr protein kinase (Class III) |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YMR190C | SGS1 | 1 | 0 | DNA helicase |
| YLR403W | SFP1 | 2 | 0 | zinc finger protein |
| YHR119W | SET1 | 3 | 0 | involved in chromatin-mediated gene regulation |
| YPL029W | SUV3 | 0 | 0 | ATP-dependent RNA helicase, mitochondrial |
| Cluster | BI0187: |
| YOR080W | DIA2 | 0 | 0 | weak similarity to TRCDSEMBL:RNRNAHOP_1 Rattus norvegicus mRNA for Hsp70/Hsp90 organizing protein (Class III) |
| YBR135W | CKS1 | 10 | 0 | cyclin-dependent kinases regulatory subunit |
| Cluster | BI0188: |
| YNR019W | ARE2 | 1 | 0 | acyl-CoA sterol acyltransferase |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| Cluster | BI0189: |
| YIL007C | 3 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YIL007C | 3 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| Cluster | BI0190: |
| YPR104C | FHL1 | 2 | 1 | transcriptional activator of the forkhead/hnf3 family |
| YKR026C | GCN3 | 15 | 0 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR174W | HMO1 | 9 | 1 | Non-histone protein |
| Cluster | BI0191: |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YIL033C | BCY1 | 6 | 0 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0192: |
| YDR398W | 4 | 0 | similarity to human KIAA0007 gene (Class IV) |
| YDR398W | 4 | 0 | similarity to human KIAA0007 gene (Class IV) |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YJR070C | 1 | 0 | similarity to C.elegans hypothetical protein C14A4.1 (Class IV) |
| YER138C | 0 | 0 |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YLR336C | SGD1 | 0 | 0 | involved in HOG pathway |
| Cluster | BI0193: |
| YKL103C | LAP4 | 10 | 1 | aminopeptidase yscI precursor, vacuolar |
| YOL082W | CVT19 | 18 | 1 | similarity to YOL083W (Class IV) |
| Cluster | BI0194: |
| YBR155W | CNS1 | 6 | 0 | weak similarity to stress-induced STI1P (Class III) |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| Cluster | BI0195: |
| YPL022W | RAD1 | 2 | 0 | component of the nucleotide excision repairosome |
| YBR195C | MSI1 | 3 | 0 | chromatin assembly complex, subunit p50 |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| Cluster | BI0196: |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YGL216W | KIP3 | 0 | 0 | kinesin-related protein required for nuclear migration |
| Cluster | BI0197: |
| YDL190C | UFD2 | 1 | 0 | ubiquitin fusion degradation protein |
| YBR170C | NPL4 | 4 | 0 | nuclear protein localization factor and ER translocation component |
| YEL037C | RAD23 | 6 | 0 | nucleotide excision repair protein (ubiquitin-like protein) |
| YBL058W | SHP1 | 0 | 0 | potential regulatory subunit for GLC7P |
| YMR276W | DSK2 | 1 | 0 | ubiquitin-like protein |
| YML100W | TSL1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 123 KD subunit |
| YER057C | HMF1 | 1 | 0 | Heat-shock induceable Inhibiter of cell Growth |
| YDR049W | 0 | 0 | similarity to C.elegans K06H7.3 protein (Class IV) |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0198: |
| YOR191W | RIS1 | 3 | 0 | similarity to RAD5 protein (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YHR171W | APG7 | 5 | 0 | component of the autophagic system |
| Cluster | BI0199: |
| YGR262C | BUD32 | 2 | 0 | weak similarity to protein kinases and M.jannaschii O-sialoglycoprotein endopeptidase homolog (Class III) |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YER174C | GRX4 | 0 | 0 | member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5) |
| YKR038C | 0 | 0 | similarity to QRI7P (Class III) |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YML036W | 0 | 0 | weak similarity to C.elegans hypothetical protein CELW03F8 (Class IV) |
| Cluster | BI0200: |
| YHL010C | 0 | 0 | similarity to C.elegans hypothetical protein, homolog to human breast cancer-associated protein BRAP2 (Class IV) |
| YHL010C | 0 | 0 | similarity to C.elegans hypothetical protein, homolog to human breast cancer-associated protein BRAP2 (Class IV) |
| YLR138W | NHA1 | 0 | 0 | putative Na+/H+ antiporter |
| YKR017C | 1 | 0 | similarity to human hypothetical KIAA0161 protein (Class IV) |
| YBL049W | 3 | 0 | strong similarity to hypothetical protein - human (Class IV) |
| Cluster | BI0201: |
| YLR238W | 2 | 0 | similarity to YDR200C (Class IV) |
| YLR238W | 2 | 0 | similarity to YDR200C (Class IV) |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YMR029C | 0 | 0 | weak similarity to human nuclear autoantigen (Class III) |
| Cluster | BI0202: |
| YHR152W | SPO12 | 15 | 0 | sporulation protein |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YDR310C | SUM1 | 0 | 0 | suppressor of SIR mutations |
| Cluster | BI0203: |
| YER125W | RSP5 | 12 | 2 | hect domain E3 ubiquitin-protein ligase |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YGR136W | 6 | 0 | weak similarity to chicken growth factor receptor-binding protein GRB2 homolog (Class III) |
| YLR392C | 2 | 0 | hypothetical protein (Class V) |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YDL140C | RPO21 | 4 | 1 | DNA-directed RNA polymerase II, 215 KD subunit |
| YKR018C | 0 | 0 | strong similarity to hypothetical protein YJL082W (Class IV) |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YMR275C | BUL1 | 1 | 1 | ubiquitination pathway protein |
| YMR275C | BUL1 | 1 | 1 | ubiquitination pathway protein |
| YIL021W | RPB3 | 8 | 0 | DNA-directed RNA-polymerase II, 45 kDa |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| Cluster | BI0204: |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR133C | HSL7 | 5 | 0 | adapter in a regulatory pathway that relieves tyrosine phosphorylation of CDC28 |
| Cluster | BI0205: |
| YJR076C | CDC11 | 6 | 3 | septin |
| YCR002C | CDC10 | 6 | 3 | cell division control protein |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YHR107C | CDC12 | 9 | 3 | septin |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YLR314C | CDC3 | 5 | 3 | cell division control protein |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0206: |
| YNL244C | SUI1 | 3 | 0 | translation initiation factor 3 (eIF3) |
| YLR027C | AAT2 | 0 | 0 | aspartate aminotransferase, cytosolic |
| YPL160W | CDC60 | 0 | 0 | leucine--tRNA ligase, cytosolic |
| YBR121C | GRS1 | 0 | 0 | glycine--tRNA ligase |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| YOR335C | ALA1 | 0 | 0 | alanyl-tRNA synthetase, cytosolic |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| YHR018C | ARG4 | 1 | 0 | arginosuccinate lyase |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YDL124W | 0 | 0 | similarity to aldose reductases (Class III) |
| YCR053W | THR4 | 0 | 0 | threonine synthase (o-p-homoserine p-lyase) |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YGR232W | NAS6 | 3 | 0 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YLR153C | ACS2 | 2 | 0 | acetyl-coenzyme A synthetase |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YOR177C | MPC54 | 3 | 0 | meiosis-specific component of the SPB |
| YPL028W | ERG10 | 0 | 0 | acetyl-CoA C-acetyltransferase, cytosolic |
| YJL167W | ERG20 | 1 | 0 | farnesyl-pyrophosphate synthetase |
| YHR019C | DED81 | 2 | 0 | asparaginyl-tRNA-synthetase |
| Cluster | BI0207: |
| YML057W | CMP2 | 2 | 1 | calcineurin B, catalytic subunit |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YPR108W | RPN7 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YNL290W | RFC3 | 1 | 0 | DNA replication factor C, 40 kDa subunit |
| Cluster | BI0208: |
| YER041W | YEN1 | 0 | 0 | weak similarity to DNA repair protein RAD2P and Dsh1p (Class III) |
| 0 | 0 |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YLR449W | FPR4 | 4 | 0 | nucleolar peptidylprolyl cis-trans isomerase (PPIase) |
| YBR088C | POL30 | 1 | 0 | Proliferating Cell Nuclear Antigen (PCNA) |
| Cluster | BI0209: |
| YPR119W | CLB2 | 12 | 1 | cyclin, G2/M-specific |
| YBR160W | CDC28 | 14 | 1 | cyclin-dependent protein kinase |
| Cluster | BI0210: |
| YIL046W | MET30 | 12 | 3 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| YDR139C | RUB1 | 2 | 1 | ubiquitin-like protein |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YDR328C | SKP1 | 17 | 3 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YNL007C | SIS1 | 1 | 0 | heat shock protein |
| YNL103W | MET4 | 3 | 1 | transcriptional activator of sulfur metabolism |
| YPL038W | MET31 | 1 | 0 | transcriptional regulator of sulfur amino acid metabolism |
| Cluster | BI0211: |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YGL026C | TRP5 | 1 | 0 | tryptophan synthase |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YPR010C | RPA135 | 5 | 1 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YPL160W | CDC60 | 0 | 0 | leucine--tRNA ligase, cytosolic |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YBR249C | ARO4 | 3 | 0 | 2-dehydro-3-deoxyphosphoheptonate aldolase, tyrosine-inhibited |
| YNL229C | URE2 | 3 | 0 | nitrogen catabolite repression regulator |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YLR086W | SMC4 | 0 | 0 | Stable Maintenance of Chromosomes |
| Cluster | BI0212: |
| YER075C | PTP3 | 0 | 0 | protein tyrosine phosphatase |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| Cluster | BI0213: |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YJL042W | MHP1 | 2 | 1 | microtubule-associated protein |
| Cluster | BI0214: |
| YJL173C | RFA3 | 5 | 0 | DNA replication factor A, 13 KD subunit |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YIL053W | RHR2 | 3 | 0 | DL-glycerol phosphatase |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YJR141W | 5 | 0 | weak similarity to hypothetical protein SPBC1734.10c S. pombe (Class IV) |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YER062C | HOR2 | 2 | 0 | DL-glycerol phosphatase |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| Cluster | BI0215: |
| YFL034W | 0 | 0 | similarity to hypothetical S. pombe protein and to C.elegans F35D11 protein (Class IV) |
| YFL034W | 0 | 0 | similarity to hypothetical S. pombe protein and to C.elegans F35D11 protein (Class IV) |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| Cluster | BI0216: |
| YNL099C | 6 | 1 | similarity to YNL032W, YNL056W and YDR067C (Class IV) |
| YNL099C | 6 | 1 | similarity to YNL032W, YNL056W and YDR067C (Class IV) |
| YNL032W | SIW14 | 4 | 1 | similarity to YNL099C, YNL056W and YDR067C (Class IV) |
| Cluster | BI0217: |
| YKL139W | CTK1 | 2 | 0 | carboxy-terminal domain (CTD) kinase, alpha subunit |
| YDL047W | SIT4 | 4 | 0 | ser/thr protein phosphatase |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YNL004W | HRB1 | 3 | 0 | strong similarity to GBP2P (Class II) |
| YDR168W | CDC37 | 0 | 0 | cell division control protein |
| YCL011C | GBP2 | 2 | 0 | potential telomere-associated protein |
| YLR403W | SFP1 | 2 | 0 | zinc finger protein |
| Cluster | BI0218: |
| YNL056W | 2 | 1 | similarity to YNL032W and YNL099C (Class IV) |
| YNL056W | 2 | 1 | similarity to YNL032W and YNL099C (Class IV) |
| YNL099C | 6 | 1 | similarity to YNL032W, YNL056W and YDR067C (Class IV) |
| Cluster | BI0219: |
| YMR235C | RNA1 | 2 | 0 | GTPase activating protein |
| YLR293C | GSP1 | 12 | 0 | GTP-binding protein of the ras superfamily |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YDR002W | YRB1 | 1 | 0 | ran-specific GTPase-activating protein |
| YOR185C | GSP2 | 2 | 0 | GTP-binding protein of the RAS superfamily |
| YPL111W | CAR1 | 6 | 0 | arginase |
| Cluster | BI0220: |
| YPR073C | LTP1 | 0 | 0 | protein-tyrosine-phosphatase |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| Cluster | BI0221: |
| YLR233C | EST1 | 7 | 0 | telomere elongation protein |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YER077C | 2 | 0 | hypothetical protein (Class V) |
| YKL014C | 0 | 0 | similarity to hypothetical protein SPCC14G10.02 S. pombe (Class IV) |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YOR319W | HSH49 | 7 | 0 | essential yeast splicing factor |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YOR201C | PET56 | 0 | 0 | rRNA (guanosine-2'-O-)-methyltransferase |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| YKR024C | DBP7 | 1 | 0 | RNA helicase required for 60S ribosomal subunit assembly |
| Cluster | BI0222: |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| 0 | 0 |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| Cluster | BI0223: |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YMR315W | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| Cluster | BI0224: |
| YNL157W | 4 | 0 | weak similarity to S.pombe hypothetical protein SPAC10F6 (Class IV) |
| YNL157W | 4 | 0 | weak similarity to S.pombe hypothetical protein SPAC10F6 (Class IV) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| Cluster | BI0225: |
| YDR388W | RVS167 | 9 | 0 | reduced viability upon starvation protein |
| YIL156W | UBP7 | 0 | 0 | ubiquitin carboxy terminal hydrolase |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YPL249C | 2 | 0 | similarity to mouse Tbc1 protein (Class III) |
| YPL249C | 2 | 0 | similarity to mouse Tbc1 protein (Class III) |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YLR243W | 3 | 0 | strong similarity to YOR262W (Class IV) |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| YOR204W | DED1 | 1 | 0 | ATP-dependent RNA helicase |
| YJR139C | HOM6 | 0 | 0 | homoserine dehydrogenase |
| Cluster | BI0226: |
| YGL058W | RAD6 | 4 | 1 | E2 ubiquitin-conjugating enzyme |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YCR066W | RAD18 | 2 | 1 | DNA repair protein |
| Cluster | BI0227: |
| YBR223C | 1 | 0 | hypothetical protein (Class V) |
| YBR223C | 1 | 0 | hypothetical protein (Class V) |
| YBL058W | SHP1 | 0 | 0 | potential regulatory subunit for GLC7P |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YBL058W | SHP1 | 0 | 0 | potential regulatory subunit for GLC7P |
| Cluster | BI0228: |
| YKL021C | MAK11 | 0 | 0 | involved in cell growth and replication of M1 dsRNA virus |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YGL141W | HUL5 | 0 | 0 | ubiquitin-protein ligase (E3) |
| Cluster | BI0229: |
| YNL106C | INP52 | 0 | 0 | phosphatidylinositol phosphate phosphatase |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YKR028W | SAP190 | 3 | 0 | SIT4P-associated protein |
| Cluster | BI0230: |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| Cluster | BI0231: |
| YOR229W | WTM2 | 3 | 0 | transcriptional modulator |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0232: |
| YPR017C | DSS4 | 4 | 2 | GDP/GTP exchange factor for SEC4P |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YLR397C | AFG2 | 2 | 0 | strong similarity to CDC48 (Class II) |
| YFL038C | YPT1 | 10 | 1 | GTP-binding protein of the rab family |
| YJL122W | 0 | 0 | weak similarity to dog-fish transition protein S2 (Class III) |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| YFL005W | SEC4 | 3 | 1 | GTP-binding protein of the ras superfamily |
| Cluster | BI0233: |
| YFL009W | CDC4 | 4 | 1 | cell division control protein |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0234: |
| YBR094W | 3 | 0 | weak similarity to pig tubulin-tyrosine ligase (Class III) |
| YBR094W | 3 | 0 | weak similarity to pig tubulin-tyrosine ligase (Class III) |
| YOR061W | CKA2 | 4 | 0 | casein kinase II alpha' chain |
| Cluster | BI0235: |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YER047C | SAP1 | 3 | 0 | member of the AAA-protein family |
| YGR256W | GND2 | 0 | 0 | phosphogluconate dehydrogenase |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| Cluster | BI0236: |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YHR008C | SOD2 | 2 | 0 | superoxide dismutase (Mn) precursor, mitochondrial |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| Cluster | BI0237: |
| YBR276C | PPS1 | 0 | 0 | protein tyrosine phosphatase |
| YLR359W | ADE13 | 0 | 0 | adenylosuccinate lyase |
| Cluster | BI0238: |
| YMR059W | SEN15 | 3 | 0 | tRNA splicing endonuclease delta subunit |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YOR230W | WTM1 | 1 | 0 | transcriptional modulator |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YGL245W | 3 | 1 | strong similarity to glutamine--tRNA ligase (Class II) |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YKL067W | YNK1 | 3 | 0 | nucleoside diphosphate kinase |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YKL080W | VMA5 | 1 | 0 | H+-ATPase V1 domain 42 KD subunit, vacuolar |
| YMR266W | RSN1 | 0 | 0 | similarity to A.thaliana hyp1 protein (Class IV) |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YIL078W | THS1 | 1 | 0 | threonyl tRNA synthetase, cytosolic |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YEL026W | SNU13 | 0 | 0 | component of the U4/U6.U5 snRNP |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YML008C | ERG6 | 6 | 0 | S-adenosyl-methionine delta-24-sterol-c-methyltransferase |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YGR256W | GND2 | 0 | 0 | phosphogluconate dehydrogenase |
| YGL105W | ARC1 | 2 | 1 | protein with specific affinity for G4 quadruplex nucleic acids |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YIL037C | PRM2 | 0 | 0 | weak similarity to C. elegans F26G1.6 protease (Class IV) |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YER091C | MET6 | 0 | 0 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase |
| YER009W | NTF2 | 2 | 0 | nuclear transport factor |
| YBL015W | ACH1 | 0 | 0 | acetyl-CoA hydrolase |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YJL005W | CYR1 | 1 | 0 | adenylate cyclase |
| YNR008W | LRO1 | 0 | 0 | a lecithin cholesterol acyltransferase-like gene, mediates diacylglycerol esterification |
| YML126C | ERG13 | 1 | 0 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YDR085C | AFR1 | 2 | 0 | involved in morphogenesis of the mating projection |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YLR027C | AAT2 | 0 | 0 | aspartate aminotransferase, cytosolic |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YCL035C | GRX1 | 1 | 0 | glutaredoxin |
| YFL022C | FRS2 | 2 | 0 | phenylalanine--tRNA ligase beta chain, cytosolic |
| Cluster | BI0239: |
| YLR340W | RPP0 | 4 | 1 | acidic ribosomal protein L10.e |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YLR287C | 3 | 1 | weak similarity to S.pombe hypothetical protein SPAC22E12 (Class IV) |
| Cluster | BI0240: |
| YKL095W | YJU2 | 2 | 0 | similarity to C.elegans hypothetical proteins (Class IV) |
| 0 | 0 |
| YLL036C | PRP19 | 1 | 0 | non-snRNP sliceosome component required for DNA repair |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YHR019C | DED81 | 2 | 0 | asparaginyl-tRNA-synthetase |
| Cluster | BI0241: |
| YBR198C | TAF90 | 16 | 0 | TFIID and SAGA subunit |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YER160C | 0 | 0 |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| Cluster | BI0242: |
| YMR094W | CTF13 | 4 | 1 | kinetochore protein complex, CBF3, 58 KD subunit |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| Cluster | BI0243: |
| YDR436W | PPZ2 | 0 | 0 | protein ser/thr phosphatase of the PP-1 family |
| YOR054C | 1 | 0 | similarity to SIS2P protein and C.tropicalis hal3protein (Class III) |
| Cluster | BI0244: |
| YGR262C | BUD32 | 2 | 0 | weak similarity to protein kinases and M.jannaschii O-sialoglycoprotein endopeptidase homolog (Class III) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YLR174W | IDP2 | 1 | 0 | isocitrate dehydrogenase, cytosolic |
| YHR216W | IMD2 | 3 | 0 | IMP dehydrogenase |
| YOR073W | 2 | 0 | hypothetical protein (Class V) |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YER174C | GRX4 | 0 | 0 | member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5) |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YGR218W | CRM1 | 38 | 0 | nuclear export factor, exportin |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YHR011W | DIA4 | 1 | 0 | strong similarity to seryl-tRNA synthetases (Class II) |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YDR098C | GRX3 | 3 | 0 | member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5) |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| YDR279W | 3 | 0 | hypothetical protein (Class V) |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YKR038C | 0 | 0 | similarity to QRI7P (Class III) |
| YBR080C | SEC18 | 1 | 0 | vesicular-fusion protein, functional homolog of NSF |
| YPR181C | SEC23 | 9 | 0 | component of COPII coat of ER-golgi vesicles |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0245: |
| YOL128C | 1 | 0 | strong similarity to protein kinase MCK1P (Class II) |
| YOL128C | 1 | 0 | strong similarity to protein kinase MCK1P (Class II) |
| YOR185C | GSP2 | 2 | 0 | GTP-binding protein of the RAS superfamily |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0246: |
| YBR264C | YPT10 | 2 | 1 | similarity to GTP-binding proteins (Class III) |
| 0 | 0 |
| YOR370C | MRS6 | 1 | 1 | geranylgeranyltransferase regulatory subunit |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| Cluster | BI0247: |
| YMR167W | MLH1 | 4 | 0 | DNA mismatch repair protein |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YOR155C | 3 | 0 | similarity to 5'-flanking region of the Pichia MOX gene (Class IV) |
| Cluster | BI0248: |
| YML029W | 0 | 0 | hypothetical protein (Class V) |
| YML029W | 0 | 0 | hypothetical protein (Class V) |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YNL329C | PEX6 | 1 | 0 | peroxisomal assembly protein |
| Cluster | BI0249: |
| YOR005C | DNL4 | 1 | 0 | DNA ligase IV |
| YNL110C | 1 | 0 | weak similarity to fruit fly RNA-binding protein (Class III) |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YDR198C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| YAL025C | MAK16 | 1 | 0 | nuclear viral propagation protein |
| YGL146C | 0 | 0 | hypothetical protein (Class V) |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| Cluster | BI0250: |
| YCR092C | MSH3 | 3 | 0 | DNA mismatch repair protein |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| Cluster | BI0251: |
| YMR205C | PFK2 | 1 | 1 | 6-phosphofructokinase, beta subunit |
| YGR240C | PFK1 | 3 | 1 | 6-phosphofructokinase, alpha subunit |
| Cluster | BI0252: |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0253: |
| YKL113C | RAD27 | 4 | 0 | ssDNA endonuclease and 5'-3'exonuclease |
| YBR088C | POL30 | 1 | 0 | Proliferating Cell Nuclear Antigen (PCNA) |
| Cluster | BI0254: |
| YDR075W | PPH3 | 1 | 0 | protein ser/thr phosphatase |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YNL201C | 12 | 1 | weak similarity to pleiotropic drug resistance control protein PDR6 (Class III) |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YBL046W | 1 | 1 | weak similarity to hypothetical protein YOR054C (Class IV) |
| YHR084W | STE12 | 2 | 0 | transcriptional activator |
| YHR011W | DIA4 | 1 | 0 | strong similarity to seryl-tRNA synthetases (Class II) |
| Cluster | BI0255: |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YLR199C | 1 | 0 | hypothetical protein (Class V) |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YKL206C | 0 | 0 | hypothetical protein (Class V) |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YGR253C | PUP2 | 2 | 0 | 20S proteasome subunit(alpha5) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YER094C | PUP3 | 2 | 0 | 20S proteasome subunit (beta3) |
| Cluster | BI0256: |
| YPL115C | BEM3 | 0 | 0 | GTPase-activating protein for CDC42P and RHO1P |
| YGR270W | YTA7 | 0 | 0 | 26S proteasome subunit |
| YDR141C | DOP1 | 0 | 0 | strong similarity to Emericella nidulans developmental regulatory gene, dopey (dopA) (Class II) |
| YIL055C | 1 | 0 | hypothetical protein (Class V) |
| Cluster | BI0257: |
| YLR293C | GSP1 | 12 | 2 | GTP-binding protein of the ras superfamily |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YOR185C | GSP2 | 2 | 1 | GTP-binding protein of the RAS superfamily |
| YJR074W | MOG1 | 2 | 2 | GSP1-interacting protein |
| Cluster | BI0258: |
| YER082C | KRE31 | 2 | 0 | similarity to M.sexta steroid regulated MNG10 protein (Class III) |
| YBL008W | HIR1 | 2 | 0 | histone transcription regulator |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YCL014W | BUD3 | 2 | 0 | budding protein |
| YEL055C | POL5 | 0 | 0 | DNA polymerase V |
| YGL068W | 0 | 0 | strong similarity to Cricetus mitochrondial ribosomal L12 protein (Class II) |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YDR293C | SSD1 | 0 | 0 | involved in the tolerance to high concentration of Ca2+ |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YEL061C | CIN8 | 2 | 0 | kinesin-related protein |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| Cluster | BI0259: |
| YDR177W | UBC1 | 0 | 0 | E2 ubiquitin-conjugating enzyme |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| Cluster | BI0260: |
| YFL033C | RIM15 | 0 | 0 | protein kinase involved in expression of meiotic genes |
| YPL031C | PHO85 | 14 | 0 | cyclin-dependent protein kinase |
| Cluster | BI0261: |
| YIL046W | MET30 | 12 | 3 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YNL103W | MET4 | 3 | 1 | transcriptional activator of sulfur metabolism |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0262: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YBR205W | KTR3 | 4 | 0 | alpha-1,2-mannosyltransferase |
| YGL122C | NAB2 | 8 | 3 | nuclear poly(A)-binding protein |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YDL204W | 3 | 0 | similarity to hypothetical protein YDR233C (Class IV) |
| YDL063C | 2 | 0 | weak similarity to human estrogen-responsive finger protein (Class III) |
| YKL212W | SAC1 | 0 | 0 | recessive suppressor of secretory defect |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| Cluster | BI0263: |
| YPR015C | 0 | 0 | similarity to transcription factors (Class III) |
| YPR015C | 0 | 0 | similarity to transcription factors (Class III) |
| YDR395W | SXM1 | 11 | 0 | putative beta-karyopherin |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| Cluster | BI0264: |
| YPL111W | CAR1 | 6 | 0 | arginase |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| Cluster | BI0265: |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| YMR209C | 1 | 0 | similarity to conserved hypothetical protein S. pombe (Class IV) |
| YPL215W | CBP3 | 4 | 0 | required for assembly of cytochrome bc1 complex |
| YDL116W | NUP84 | 19 | 0 | nuclear pore protein |
| Cluster | BI0266: |
| YBR274W | CHK1 | 4 | 0 | regulats inhibitory Cdk phosphorylation of PDS1 |
| YLR152C | 0 | 0 | similarity to YOR3165W and YNL095C (Class IV) |
| Cluster | BI0267: |
| YKL108W | SLD2 | 1 | 0 | chromosomal DNA replication protein |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YIL035C | CKA1 | 4 | 0 | casein kinase II, catalytic alpha chain |
| YHR076W | 0 | 0 | weak similarity to C.elegans hypothetical protein CEW09D10 (Class IV) |
| YJL087C | TRL1 | 1 | 0 | tRNA ligase |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YLR354C | TAL1 | 1 | 0 | transaldolase |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YIL035C | CKA1 | 4 | 0 | casein kinase II, catalytic alpha chain |
| Cluster | BI0268: |
| YKL189W | HYM1 | 2 | 1 | similarity to mouse hypothetical calcium-binding protein and D.melanogaster Mo25 gene (Class III) |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| YHR102W | KIC1 | 10 | 1 | ser/thr protein kinase that interacts with CDC31P |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YKL010C | UFD4 | 1 | 0 | similarity to rat ubiquitin ligase Nedd4 (Class III) |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| Cluster | BI0269: |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| 0 | 0 |
| YFL022C | FRS2 | 2 | 0 | phenylalanine--tRNA ligase beta chain, cytosolic |
| YPL078C | ATP4 | 3 | 0 | F1F0-ATPase complex, F0 subunit B |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| Cluster | BI0270: |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YGR209C | TRX2 | 2 | 0 | thioredoxin II |
| Cluster | BI0271: |
| YBR114W | RAD16 | 3 | 1 | nucleotide excision repair protein |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YGR193C | PDX1 | 1 | 0 | pyruvate dehydrogenase complex protein X |
| YJR052W | RAD7 | 2 | 1 | nucleotide excision repair protein |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YOL012C | HTZ1 | 2 | 0 | evolutionarily conserved member of the histone H2A F/Z family of histone variants |
| YBL058W | SHP1 | 0 | 0 | potential regulatory subunit for GLC7P |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| Cluster | BI0272: |
| YML064C | TEM1 | 73 | 1 | GTP-binding protein of the RAS superfamily |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YKL067W | YNK1 | 3 | 1 | nucleoside diphosphate kinase |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YBR227C | MCX1 | 0 | 0 | similarity to E.coli ATP-binding protein clpX (Class III) |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YPL218W | SAR1 | 4 | 0 | GTP-binding protein of the ARF family |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| Cluster | BI0273: |
| YNL161W | CBK1 | 2 | 0 | strong similarity to U.maydis Ukc1p protein kinase (Class II) |
| YNL007C | SIS1 | 1 | 0 | heat shock protein |
| YIL129C | TAO3 | 1 | 0 | Transcriptional Activator of OCH1 |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YFL034C-B | MOB2 | 4 | 0 | required for maintenance in ploidy |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YLR447C | VMA6 | 88 | 0 | H+-ATPase V0 domain 36 KD subunit, vacuolar |
| Cluster | BI0274: |
| YFR021W | NMR1 | 1 | 0 | similarity to hypothetical protein YPL100W (Class IV) |
| YFR040W | SAP155 | 1 | 0 | SIT4P-associated protein |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YNL242W | APG2 | 0 | 0 | required for sporulation |
| Cluster | BI0275: |
| YNL244C | SUI1 | 3 | 1 | translation initiation factor 3 (eIF3) |
| YMR309C | NIP1 | 7 | 3 | associated with 40s ribosomal subunit |
| YMR146C | TIF34 | 4 | 2 | translation initiation factor eIF3, p39 subunit |
| YBR079C | RPG1 | 2 | 1 | translation initiation factor eIF3 (p110 subunit) |
| YDR429C | TIF35 | 6 | 1 | translation initiation factor eIF3 (p33 subunit) |
| Cluster | BI0276: |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| YML100W | TSL1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 123 KD subunit |
| Cluster | BI0277: |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YDR238C | SEC26 | 1 | 0 | coatomer complex beta chain of secretory pathway vesicles |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YPL222W | 3 | 0 | similarity to C.perfringens hypothetical protein (Class IV) |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| Cluster | BI0278: |
| YIR001C | SGN1 | 2 | 1 | similarity to D.melanogaster RNA binding protein (Class III) |
| YAL035W | FUN12 | 2 | 0 | general translation factor eIF2 homolog |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YGR250C | 3 | 1 | weak similarity to human cleavage stimulation factor 64K chain (Class III) |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YNL016W | PUB1 | 3 | 0 | major polyadenylated RNA-binding protein of nucleus and cytoplasm |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YER161C | SPT2 | 7 | 0 | multifunctional HMG-like chromatin protein |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0279: |
| YPL051W | ARL3 | 3 | 0 | ADP-ribosylation factor-like protein, member of the arf-sar family in the ras superfamily |
| YKL206C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0280: |
| YER173W | RAD24 | 2 | 2 | cell cycle checkpoint protein |
| YNL290W | RFC3 | 1 | 0 | DNA replication factor C, 40 kDa subunit |
| YNL290W | RFC3 | 1 | 0 | DNA replication factor C, 40 kDa subunit |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YBR087W | RFC5 | 3 | 2 | DNA replication factor C, 40 KD subunit |
| YJR068W | RFC2 | 2 | 2 | DNA replication factor C, 41 KD subunit |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YLR413W | 2 | 0 | strong similarity to YKL187C (Class IV) |
| YJR068W | RFC2 | 2 | 2 | DNA replication factor C, 41 KD subunit |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YBR087W | RFC5 | 3 | 2 | DNA replication factor C, 40 KD subunit |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| Cluster | BI0281: |
| YDL188C | PPH22 | 2 | 1 | protein ser/thr phosphatase PP2A-2 |
| YGR161C | 0 | 0 | hypothetical protein (Class V) |
| YHR075C | PPE1 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YOR014W | RTS1 | 6 | 1 | potential regulatory subunit of protein phosphatase 2A |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YAL016W | TPD3 | 3 | 1 | ser/thr protein phosphatase 2A, regulatory chain A |
| YGL121C | 0 | 0 | hypothetical protein (Class V) |
| YOL005C | RPB11 | 1 | 0 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YMR028W | TAP42 | 3 | 1 | component of the Tor signaling pathway |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| Cluster | BI0282: |
| YLR427W | 1 | 0 | weak similarity to human transcription regulator Staf-5 (Class III) |
| YLR427W | 1 | 0 | weak similarity to human transcription regulator Staf-5 (Class III) |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YGL049C | TIF4632 | 3 | 1 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YAL035W | FUN12 | 2 | 0 | general translation factor eIF2 homolog |
| YCR048W | ARE1 | 1 | 0 | acyl-CoA sterol acyltransferase |
| YGR162W | TIF4631 | 6 | 1 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YBR121C | GRS1 | 0 | 0 | glycine--tRNA ligase |
| YHR216W | IMD2 | 3 | 0 | IMP dehydrogenase |
| YLR219W | MSC3 | 0 | 0 | hypothetical protein (Class V) |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| Cluster | BI0283: |
| YLR403W | SFP1 | 2 | 0 | zinc finger protein |
| YKR063C | LAS1 | 0 | 0 | involved in cell morphogenesis, cytoskeletal regulation and bud formation |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| Cluster | BI0284: |
| YLR248W | RCK2 | 1 | 0 | Ca/calmodulin-dependent ser/thr protein kinase |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YLR113W | HOG1 | 5 | 0 | ser/thr protein kinase of MAP kinase (MAPK) family |
| Cluster | BI0285: |
| YLR096W | KIN2 | 0 | 0 | ser/thr protein kinase |
| YGR238C | KEL2 | 2 | 1 | involved in cell fusion and morphogenesis |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YML006C | GIS4 | 2 | 0 | hypothetical protein (Class V) |
| YAR014C | BUD14 | 2 | 0 | similarity to hypothetical protein S.pombe (Class IV) |
| YGR047C | TFC4 | 4 | 0 | TFIIIC (transcription initiation factor) subunit, 131 kD |
| YHR158C | KEL1 | 5 | 1 | involved in cell fusion and morphology |
| YPR159W | KRE6 | 1 | 0 | glucan synthase subunit |
| YML057W | CMP2 | 2 | 0 | calcineurin B, catalytic subunit |
| YHR044C | DOG1 | 0 | 0 | 2-deoxyglucose-6-phosphate phosphatase |
| YNR052C | POP2 | 8 | 0 | required for glucose derepression |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| Cluster | BI0286: |
| YML102W | CAC2 | 2 | 1 | chromatin assembly complex, subunit p60 |
| YPR018W | RLF2 | 3 | 1 | chromatin assembly complex, subunit p90 |
| Cluster | BI0287: |
| YDR482C | 3 | 0 | hypothetical protein (Class V) |
| YDR482C | 3 | 0 | hypothetical protein (Class V) |
| YAL016W | TPD3 | 3 | 0 | ser/thr protein phosphatase 2A, regulatory chain A |
| Cluster | BI0288: |
| YDR395W | SXM1 | 11 | 1 | putative beta-karyopherin |
| YAL059W | ECM1 | 0 | 0 | involved in cell wall biosynthesis |
| YDL051W | LHP1 | 1 | 1 | RNA binding protein |
| Cluster | BI0289: |
| YDR217C | RAD9 | 1 | 0 | DNA repair checkpoint protein |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| Cluster | BI0290: |
| YJL042W | MHP1 | 2 | 1 | microtubule-associated protein |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| Cluster | BI0291: |
| YAR003W | FUN16 | 3 | 0 | similarity to human RB protein binding protein (Class III) |
| YAR003W | FUN16 | 3 | 0 | similarity to human RB protein binding protein (Class III) |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0292: |
| YHR082C | KSP1 | 0 | 0 | ser/thr protein kinase |
| YNL192W | CHS1 | 1 | 0 | chitin synthase I |
| YAL016W | TPD3 | 3 | 0 | ser/thr protein phosphatase 2A, regulatory chain A |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YKR024C | DBP7 | 1 | 0 | RNA helicase required for 60S ribosomal subunit assembly |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YNL201C | 12 | 0 | weak similarity to pleiotropic drug resistance control protein PDR6 (Class III) |
| YJL095W | BCK1 | 2 | 0 | ser/thr protein kinase of the MEKK family |
| YML057W | CMP2 | 2 | 0 | calcineurin B, catalytic subunit |
| YHR186C | 0 | 0 | similarity to C.elegans hypothetical protein C10C5.6 (Class IV) |
| Cluster | BI0293: |
| YBR083W | TEC1 | 0 | 0 | Ty transcription activator |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YHR084W | STE12 | 2 | 0 | transcriptional activator |
| Cluster | BI0294: |
| YDR225W | HTA1 | 4 | 1 | histone H2A |
| YPR190C | RPC82 | 2 | 0 | DNA-directed RNA polymerase III, 82 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YKR048C | NAP1 | 9 | 1 | nucleosome assembly protein I |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YOR038C | HIR2 | 2 | 0 | histone transcription regulator |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YGL241W | KAP114 | 1 | 0 | Member of the karyopherin-beta family, nuclear import |
| Cluster | BI0295: |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| Cluster | BI0296: |
| YNL032W | SIW14 | 4 | 0 | similarity to YNL099C, YNL056W and YDR067C (Class IV) |
| YDR516C | 3 | 0 | strong similarity to glucokinase (Class II) |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| Cluster | BI0297: |
| YJL157C | FAR1 | 6 | 0 | cyclin-dependent kinase inhibitor (CKI) |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| Cluster | BI0298: |
| YCR009C | RVS161 | 4 | 1 | similarity to human amphiphysin and RVS167P (Class III) |
| YDR388W | RVS167 | 9 | 2 | reduced viability upon starvation protein |
| YGL060W | 2 | 1 | strong similarity to hypothetical protein YBR216C (Class IV) |
| Cluster | BI0299: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YKL009W | MRT4 | 1 | 0 | mRNA turnover 4 |
| YBL030C | PET9 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YNL169C | PSD1 | 1 | 0 | phosphatidylserine decarboxylase 1 |
| YMR241W | YHM2 | 0 | 0 | yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YMR145C | NDH1 | 0 | 0 | mitochondrial cytosolically directed NADH dehydrogenase |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YDL063C | 2 | 0 | weak similarity to human estrogen-responsive finger protein (Class III) |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| YOR317W | FAA1 | 4 | 0 | long-chain-fatty-acid--CoA ligase |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YIL124W | AYR1 | 2 | 0 | 1-Acyldihydroxyacetone-phosphate reductase |
| YLR293C | GSP1 | 12 | 0 | GTP-binding protein of the ras superfamily |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YGL122C | NAB2 | 8 | 3 | nuclear poly(A)-binding protein |
| YGR005C | TFG2 | 2 | 0 | TFIIF subunit (transcription initiation factor), 54 kD |
| YBR205W | KTR3 | 4 | 0 | alpha-1,2-mannosyltransferase |
| YKR046C | 0 | 0 | hypothetical protein (Class V) |
| YGR282C | BGL2 | 0 | 0 | endo-beta-1,3-glucanase of the cell wall |
| YKL120W | OAC1 | 1 | 0 | similarity to mitochondrial uncoupling proteins (MCF) (Class III) |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| Cluster | BI0300: |
| YOR212W | STE4 | 12 | 0 | GTP-binding protein beta subunit of the pheromone pathway |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YMR120C | ADE17 | 0 | 0 | 5-aminoimidazole-4-carboxamide ribotide transformylase |
| Cluster | BI0301: |
| YPL135W | ISU1 | 0 | 0 | strong similarity to nitrogen fixation protein (nifU) (Class II) |
| YCL017C | NFS1 | 1 | 0 | regulates Iron-Sulfur cluster proteins, cellular Iron uptake, andIron distribution |
| Cluster | BI0302: |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YDR233C | 2 | 0 | similarity to hypothetical protein YDL204W (Class IV) |
| YLL022C | HIF1 | 1 | 0 | HAT1 Interacting Factor 1 |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | BI0303: |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YKL062W | MSN4 | 0 | 0 | transcriptional activator |
| YER083C | 3 | 0 | hypothetical protein (Class V) |
| Cluster | BI0304: |
| YFL034C-B | MOB2 | 4 | 0 | required for maintenance in ploidy |
| YNL161W | CBK1 | 2 | 0 | strong similarity to U.maydis Ukc1p protein kinase (Class II) |
| YNL161W | CBK1 | 2 | 0 | strong similarity to U.maydis Ukc1p protein kinase (Class II) |
| Cluster | BI0305: |
| YGR067C | 0 | 0 | weak similarity to transcription factors (Class III) |
| YGR067C | 0 | 0 | weak similarity to transcription factors (Class III) |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| Cluster | BI0306: |
| YBR130C | SHE3 | 2 | 0 | required for mother cell-specific expression of HO |
| YBR143C | SUP45 | 4 | 0 | translational release factor |
| YGL106W | MLC1 | 2 | 0 | MYO2P light chain |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YLR092W | SUL2 | 1 | 0 | sulfate transporter |
| Cluster | BI0307: |
| YFR016C | 1 | 0 | similarity to mammalian neurofilament proteins and to Dictyostelium protein kinase (Class III) |
| YFR016C | 1 | 0 | similarity to mammalian neurofilament proteins and to Dictyostelium protein kinase (Class III) |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YIL034C | CAP2 | 16 | 0 | F-actin capping protein, beta subunit |
| YKL007W | CAP1 | 2 | 0 | F-actin capping protein alpha subunit |
| Cluster | BI0308: |
| YER142C | MAG1 | 0 | 0 | 3-methyladenine DNA glycosylase |
| YIR002C | MPH1 | 2 | 0 | protection of the genome from spontaneous and chemically induced damage |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| Q0050 | AI1 | 0 | 0 | COX1 intron 1 protein |
| YAL035W | FUN12 | 2 | 0 | general translation factor eIF2 homolog |
| YBR010W | HHT1 | 3 | 0 | histone H3 |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YOL090W | MSH2 | 5 | 0 | DNA mismatch repair protein |
| YPR190C | RPC82 | 2 | 0 | DNA-directed RNA polymerase III, 82 KD subunit |
| YPL127C | HHO1 | 0 | 0 | histone H1 protein |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YHR216W | IMD2 | 3 | 0 | IMP dehydrogenase |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| Cluster | BI0309: |
| YDL116W | NUP84 | 19 | 0 | nuclear pore protein |
| YJL117W | PHO86 | 4 | 0 | inorganic phospate transporter |
| YKL057C | NUP120 | 6 | 0 | nuclear pore protein |
| Cluster | BI0310: |
| YJR076C | CDC11 | 6 | 1 | septin |
| YCR002C | CDC10 | 6 | 1 | cell division control protein |
| Cluster | BI0311: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YGL105W | ARC1 | 2 | 0 | protein with specific affinity for G4 quadruplex nucleic acids |
| YBR205W | KTR3 | 4 | 0 | alpha-1,2-mannosyltransferase |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YGL122C | NAB2 | 8 | 2 | nuclear poly(A)-binding protein |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YDR071C | 3 | 0 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YMR145C | NDH1 | 0 | 0 | mitochondrial cytosolically directed NADH dehydrogenase |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| Cluster | BI0312: |
| YLR186W | EMG1 | 0 | 0 | strong similarity to S.pombe hypothetical protein C18G6.07C (Class IV) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| Cluster | BI0313: |
| YDR097C | MSH6 | 3 | 1 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 1 | DNA mismatch repair protein |
| Cluster | BI0314: |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0315: |
| YBR160W | CDC28 | 14 | 0 | cyclin-dependent protein kinase |
| YFR030W | MET10 | 0 | 0 | sulfite reductase flavin-binding subunit |
| YFR015C | GSY1 | 6 | 0 | UDP glucose--starch glucosyltransferase, isoform 1 |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0316: |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YLR105C | SEN2 | 6 | 0 | tRNA splicing endonuclease beta subunit |
| YJR070C | 1 | 0 | similarity to C.elegans hypothetical protein C14A4.1 (Class IV) |
| Cluster | BI0317: |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YOR187W | TUF1 | 2 | 0 | translation elongation factor TU, mitochondrial |
| YOR061W | CKA2 | 4 | 0 | casein kinase II alpha' chain |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YHR099W | TRA1 | 15 | 0 | component of the Ada-Spt transcriptional regulatory complex |
| YGL017W | ATE1 | 0 | 0 | arginyl tRNA transferase |
| YDR359C | VID21 | 0 | 0 | weak similarity to human trichohyalin (Class III) |
| YPR040W | SDF1 | 8 | 0 | similarity to C.elegans C02C2.6 protein (Class IV) |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YOR244W | ESA1 | 2 | 0 | histone acetyltransferase |
| YMR005W | MPT1 | 1 | 0 | required for protein synthesis |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YFL024C | EPL1 | 0 | 0 | weak similarity to YMR164C and GAL11P (Class III) |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| Cluster | BI0318: |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| 0 | 0 |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| Cluster | BI0319: |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| Cluster | BI0320: |
| YOR080W | DIA2 | 0 | 0 | weak similarity to TRCDSEMBL:RNRNAHOP_1 Rattus norvegicus mRNA for Hsp70/Hsp90 organizing protein (Class III) |
| YBL023C | MCM2 | 4 | 0 | member of the MCM2P,MCM3P,CDC46P family |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YPR135W | CTF4 | 3 | 0 | DNA-directed DNA polymerase alpha-binding protein |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YBL104C | 1 | 0 | weak similarity to S.pombe hypothetical protein SPAC12G12.01c (Class IV) |
| YPL217C | BMS1 | 0 | 0 | similarity to human hypothetical protein KIAA0187 (Class IV) |
| YEL032W | MCM3 | 2 | 1 | replication initiation protein |
| YPL211W | NIP7 | 3 | 0 | required for efficient 60S ribosome subunit biogenesis |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YDL031W | DBP10 | 0 | 0 | putative RNA helicase involved in ribosome biogenesis |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YLR274W | CDC46 | 3 | 1 | cell division control protein |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| YDR312W | SSF2 | 0 | 0 | protein with a potential role in mating |
| YCL054W | SPB1 | 3 | 0 | required for ribosome synthesis, putative methylase |
| YJL141C | YAK1 | 2 | 0 | ser/thr protein kinase |
| YHR019C | DED81 | 2 | 0 | asparaginyl-tRNA-synthetase |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YKL176C | LST4 | 0 | 0 | protein required for regulated transport of nitrogen-regulated permeases from the Golgi to the plasma membrane |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YHR030C | SLT2 | 11 | 0 | ser/thr protein kinase of MAP kinase family |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YKL014C | 0 | 0 | similarity to hypothetical protein SPCC14G10.02 S. pombe (Class IV) |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| Cluster | BI0322: |
| YDR477W | SNF1 | 10 | 2 | carbon catabolite derepressing ser/thr protein kinase |
| YGL115W | SNF4 | 10 | 2 | nuclear regulatory protein |
| YMR086W | 0 | 0 | similarity to YKL105C (Class IV) |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YGL208W | SIP2 | 2 | 2 | dominant suppressor of some ts mutations in RPO21 and PRP4 |
| Cluster | BI0323: |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| 0 | 0 |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YDL235C | YPD1 | 2 | 0 | phosphorelay intermediate between SLN1P and SSK1P |
| YBR242W | 1 | 0 | strong similarity to hypothetical protein YGL101W (Class IV) |
| YHR088W | RPF1 | 0 | 0 | similarity to hypothetical protein YNL075W (Class IV) |
| YJL154C | VPS35 | 5 | 0 | protein-sorting protein, vacuolar |
| YIL137C | 1 | 0 | similarity to M.musculus aminopeptidase (Class III) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YPR088C | SRP54 | 2 | 0 | signal recognition particle subunit |
| Cluster | BI0324: |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YLR002C | 2 | 0 | similarity to hypothetical C. elegans protein (Class IV) |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| YOR229W | WTM2 | 3 | 0 | transcriptional modulator |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YGL207W | SPT16 | 3 | 1 | general chromatin factor |
| YGL104C | 2 | 0 | similarity to glucose transport proteins (Class III) |
| YHL035C | 0 | 0 | similarity to multidrug resistance proteins (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YLR403W | SFP1 | 2 | 0 | zinc finger protein |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YDR116C | 1 | 0 | similarity to bacterial ribosomal L1 proteins (Class III) |
| YJL087C | TRL1 | 1 | 0 | tRNA ligase |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YMR172W | HOT1 | 1 | 0 | similarity to MSN1 protein (Class III) |
| YDL031W | DBP10 | 0 | 0 | putative RNA helicase involved in ribosome biogenesis |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YKL082C | 0 | 0 | weak similarity to C.elegans hypothetical protein (Class IV) |
| YML069W | POB3 | 3 | 1 | protein that binds to DNA polymerase I (PolI) |
| Cluster | BI0325: |
| YJR076C | CDC11 | 6 | 0 | septin |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| Cluster | BI0326: |
| YNL098C | RAS2 | 3 | 0 | GTP-binding protein |
| YBR140C | IRA1 | 0 | 0 | inhibitory regulator protein of the ras-cyclic AMP pathway |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| Cluster | BI0327: |
| YOR351C | MEK1 | 1 | 0 | ser/thr protein kinase |
| YMR323W | 0 | 0 | strong similarity to phosphopyruvate hydratases (Class II) |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| Cluster | BI0328: |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YPR010C | RPA135 | 5 | 1 | DNA-directed RNA polymerase I, 135 KD subunit |
| Cluster | BI0330: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YJL141C | YAK1 | 2 | 0 | ser/thr protein kinase |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| Cluster | BI0331: |
| YJL090C | DPB11 | 3 | 0 | involved in DNA replication and S-phase checkpoint |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| Cluster | BI0332: |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YLR215C | CDC123 | 5 | 0 | strong similarity to rat cell cycle progression related D123 protein (Class II) |
| YOR260W | GCD1 | 3 | 0 | translation initiation factor eIF2bgamma subunit |
| Cluster | BI0333: |
| YKR036C | CAF4 | 0 | 0 | CCR4 associated factor |
| YPR088C | SRP54 | 2 | 0 | signal recognition particle subunit |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YBL029W | 0 | 0 | hypothetical protein (Class V) |
| YLR206W | ENT2 | 0 | 0 | clathrin binding protein, required for endocytosis |
| YHR001W | OSH7 | 0 | 0 | similarity to KES1P (Class III) |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| Cluster | BI0334: |
| YPR054W | SMK1 | 5 | 1 | sporulation-specific MAP kinase |
| YKL029C | MAE1 | 2 | 0 | malic enzyme |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YOR299W | BUD7 | 15 | 0 | involved in bud-site selection |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YHR030C | SLT2 | 11 | 0 | ser/thr protein kinase of MAP kinase family |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YPR191W | QCR2 | 6 | 2 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0335: |
| YER136W | GDI1 | 4 | 1 | GDP dissociation inhibitor |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YFL038C | YPT1 | 10 | 0 | GTP-binding protein of the rab family |
| YLR262C | YPT6 | 1 | 0 | GTP-binding protein of the rab family |
| YKR014C | YPT52 | 4 | 0 | GTP-binding protein of the rab family |
| YLR362W | STE11 | 16 | 0 | ser/thr protein kinase of the MEKK family |
| YBR264C | YPT10 | 2 | 0 | similarity to GTP-binding proteins (Class III) |
| YGL210W | YPT32 | 0 | 0 | small GTP-binding protein essential for Golgi function |
| YML001W | YPT7 | 2 | 0 | GTP-binding protein of the RAB family |
| YER031C | YPT31 | 7 | 0 | GTP-binding protein of the rab family |
| YFL005W | SEC4 | 3 | 1 | GTP-binding protein of the ras superfamily |
| Cluster | BI0336: |
| YDR328C | SKP1 | 17 | 4 | kinetochore protein complex CBF3, subunit D |
| YFL009W | CDC4 | 4 | 2 | cell division control protein |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YLR267W | BOP2 | 2 | 0 | hypothetical protein (Class V) |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YML088W | UFO1 | 2 | 1 | involved in degradation of HO protein |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YOR057W | SGT1 | 4 | 1 | suppressor of G2 allele of SKP1 |
| Cluster | BI0337: |
| YGL208W | SIP2 | 2 | 2 | dominant suppressor of some ts mutations in RPO21 and PRP4 |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YER027C | GAL83 | 3 | 2 | glucose repression protein |
| YDR477W | SNF1 | 10 | 3 | carbon catabolite derepressing ser/thr protein kinase |
| YNR035C | ARC35 | 2 | 0 | subunit of the ARP2/3 complex |
| YGL115W | SNF4 | 10 | 3 | nuclear regulatory protein |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| Cluster | BI0338: |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| YCR002C | CDC10 | 6 | 0 | cell division control protein |
| Cluster | BI0339: |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YLL022C | HIF1 | 1 | 0 | HAT1 Interacting Factor 1 |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | BI0340: |
| YGL158W | RCK1 | 1 | 0 | ser/thr protein kinase |
| YGL115W | SNF4 | 10 | 0 | nuclear regulatory protein |
| Cluster | BI0341: |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YLR059C | REX2 | 1 | 0 | putative 3'-5' exonuclease |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| Cluster | BI0342: |
| YHR030C | SLT2 | 11 | 1 | ser/thr protein kinase of MAP kinase family |
| YKL073W | LHS1 | 0 | 0 | chaperone of the ER lumen |
| YLR187W | 0 | 0 | similarity to hypothetical protein YNL278W (Class IV) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YOR220W | 3 | 0 | hypothetical protein (Class V) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YNL007C | SIS1 | 1 | 0 | heat shock protein |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YHR102W | KIC1 | 10 | 0 | ser/thr protein kinase that interacts with CDC31P |
| YLR096W | KIN2 | 0 | 0 | ser/thr protein kinase |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YPR054W | SMK1 | 5 | 1 | sporulation-specific MAP kinase |
| YJL095W | BCK1 | 2 | 1 | ser/thr protein kinase of the MEKK family |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YPL140C | MKK2 | 5 | 2 | protein kinase of the map kinase kinase (MEK) family |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| Cluster | BI0343: |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YKL204W | EAP1 | 1 | 0 | translation initiation factor 4E-associated protein |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YER090W | TRP2 | 1 | 0 | anthranilate synthase component I |
| YGL115W | SNF4 | 10 | 0 | nuclear regulatory protein |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| Cluster | BI0344: |
| YLR229C | CDC42 | 13 | 1 | GTP-binding protein of RAS superfamily |
| YDR143C | SAN1 | 0 | 0 | mating-type regulation protein |
| YPL161C | BEM4 | 7 | 1 | bud emergence protein |
| Cluster | BI0345: |
| YGR040W | KSS1 | 7 | 3 | ser/thr protein kinase of the MAP kinase family |
| YPL049C | DIG1 | 8 | 2 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YLR362W | STE11 | 16 | 1 | ser/thr protein kinase of the MEKK family |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YDL159W | STE7 | 6 | 1 | ser/thr/tyr protein kinase of MAP kinase kinase family |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YER167W | BCK2 | 0 | 0 | suppressor of mutations in protein kinase C pathway components |
| YHR084W | STE12 | 2 | 1 | transcriptional activator |
| YPL049C | DIG1 | 8 | 2 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YHR084W | STE12 | 2 | 1 | transcriptional activator |
| YDL159W | STE7 | 6 | 1 | ser/thr/tyr protein kinase of MAP kinase kinase family |
| YPL115C | BEM3 | 0 | 0 | GTPase-activating protein for CDC42P and RHO1P |
| YLR154C | 1 | 0 | hypothetical protein (Class V) |
| Cluster | BI0346: |
| YOR227W | 0 | 0 | similarity to microtubule-interacting protein MHP1P (Class III) |
| YOR227W | 0 | 0 | similarity to microtubule-interacting protein MHP1P (Class III) |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| Cluster | BI0347: |
| YML115C | VAN1 | 2 | 1 | vanadate resistance protein |
| YPL050C | MNN9 | 4 | 1 | required for complex N-glycosylation |
| Cluster | BI0348: |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| 0 | 0 |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YMR287C | MSU1 | 1 | 0 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial |
| Cluster | BI0349: |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| Cluster | BI0351: |
| YDL225W | SHS1 | 5 | 0 | septin |
| YNR035C | ARC35 | 2 | 0 | subunit of the ARP2/3 complex |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YJR070C | 1 | 0 | similarity to C.elegans hypothetical protein C14A4.1 (Class IV) |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YGR282C | BGL2 | 0 | 0 | endo-beta-1,3-glucanase of the cell wall |
| YDR148C | KGD2 | 11 | 0 | 2-oxoglutarate dehydrogenase complex E2 component |
| Cluster | BI0352: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| Cluster | BI0353: |
| YDL193W | 3 | 0 | similarity to N.crassa hypothetical 32 kDa protein (Class IV) |
| YDL193W | 3 | 0 | similarity to N.crassa hypothetical 32 kDa protein (Class IV) |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YLR293C | GSP1 | 12 | 0 | GTP-binding protein of the ras superfamily |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YOR185C | GSP2 | 2 | 0 | GTP-binding protein of the RAS superfamily |
| Cluster | BI0354: |
| YDL059C | RAD59 | 3 | 0 | recombination and DNA repair protein |
| YML032C | RAD52 | 5 | 1 | recombination and DNA repair protein |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YER062C | HOR2 | 2 | 0 | DL-glycerol phosphatase |
| YIL021W | RPB3 | 8 | 0 | DNA-directed RNA-polymerase II, 45 kDa |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YER052C | HOM3 | 6 | 0 | L-aspartate 4-P-transferase |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YEL060C | PRB1 | 3 | 1 | protease B, vacuolar |
| YKL127W | PGM1 | 3 | 0 | phosphoglucomutase, minor isoform |
| YIL053W | RHR2 | 3 | 0 | DL-glycerol phosphatase |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YAL015C | NTG1 | 0 | 0 | DNA repair protein |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YMR108W | ILV2 | 0 | 0 | acetolactate synthase |
| YEL060C | PRB1 | 3 | 1 | protease B, vacuolar |
| YER052C | HOM3 | 6 | 0 | L-aspartate 4-P-transferase |
| YBR129C | OPY1 | 1 | 0 | pheromone resistant yeast 1 |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YER138C | 0 | 0 |
| YER031C | YPT31 | 7 | 0 | GTP-binding protein of the rab family |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YBL056W | PTC3 | 2 | 0 | ser/thr protein phosphatase PP2C |
| Cluster | BI0355: |
| YKL011C | CCE1 | 4 | 0 | cruciform-cutting endonuclease, mitochondrial |
| YIL066C | RNR3 | 1 | 0 | ribonucleotide reductase, repair inducible large subunit |
| Cluster | BI0356: |
| YPL140C | MKK2 | 5 | 1 | protein kinase of the map kinase kinase (MEK) family |
| YJL095W | BCK1 | 2 | 1 | ser/thr protein kinase of the MEKK family |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YMR275C | BUL1 | 1 | 0 | ubiquitination pathway protein |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YBR260C | RGD1 | 3 | 0 | similarity to C.elegans GTPase-activating protein (Class III) |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YPR108W | RPN7 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| Cluster | BI0357: |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YAL016W | TPD3 | 3 | 0 | ser/thr protein phosphatase 2A, regulatory chain A |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| Cluster | BI0358: |
| YIL063C | YRB2 | 4 | 1 | involved in nuclear protein export |
| 0 | 0 |
| YGR218W | CRM1 | 38 | 1 | nuclear export factor, exportin |
| Cluster | BI0359: |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YJR076C | CDC11 | 6 | 4 | septin |
| YHR107C | CDC12 | 9 | 4 | septin |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| YDL225W | SHS1 | 5 | 4 | septin |
| Cluster | BI0360: |
| YOL045W | 0 | 0 | similarity to ser/thr protein kinase (Class III) |
| YOL045W | 0 | 0 | similarity to ser/thr protein kinase (Class III) |
| YAL017W | FUN31 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| YAL019W | FUN30 | 0 | 0 | similarity to helicases of the SNF2/RAD54 family (Class III) |
| Cluster | BI0361: |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YIL104C | 4 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| Cluster | BI0362: |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YGR210C | 1 | 0 | similarity to M.jannaschii GTP-binding protein and to M.capricolum hypothetical protein SGC3 (Class IV) |
| Cluster | BI0363: |
| YOR319W | HSH49 | 7 | 0 | essential yeast splicing factor |
| YML049C | RSE1 | 2 | 0 | involved in RNA splicing and ER to Golgi transport |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0364: |
| YMR201C | RAD14 | 1 | 0 | nucleotide excision repair protein |
| YPR135W | CTF4 | 3 | 0 | DNA-directed DNA polymerase alpha-binding protein |
| YBR114W | RAD16 | 3 | 0 | nucleotide excision repair protein |
| YPL022W | RAD1 | 2 | 0 | component of the nucleotide excision repairosome |
| YPR135W | CTF4 | 3 | 0 | DNA-directed DNA polymerase alpha-binding protein |
| YBR114W | RAD16 | 3 | 0 | nucleotide excision repair protein |
| YER162C | RAD4 | 3 | 0 | excision repair protein |
| YBR114W | RAD16 | 3 | 0 | nucleotide excision repair protein |
| YKL011C | CCE1 | 4 | 0 | cruciform-cutting endonuclease, mitochondrial |
| Cluster | BI0365: |
| YMR291W | 1 | 0 | similarity to ser/thr protein kinase (Class III) |
| YMR291W | 1 | 0 | similarity to ser/thr protein kinase (Class III) |
| YLR396C | VPS33 | 4 | 0 | vacuolar sorting protein |
| YPL262W | FUM1 | 0 | 0 | fumarate hydratase |
| Cluster | BI0366: |
| YLR352W | 3 | 1 | hypothetical protein (Class V) |
| YLR352W | 3 | 1 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0367: |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YOR142W | LSC1 | 0 | 0 | succinate-CoA ligase alpha subunit |
| YER062C | HOR2 | 2 | 0 | DL-glycerol phosphatase |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YMR056C | AAC1 | 2 | 0 | ADP/ATP carrier protein (MCF) |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YPR121W | THI22 | 0 | 0 | similarity to B.subtilis transcriptional activator tenA (Class III) |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YBR184W | 2 | 0 | hypothetical protein (Class V) |
| YIL053W | RHR2 | 3 | 0 | DL-glycerol phosphatase |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| Cluster | BI0368: |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YBR035C | PDX3 | 1 | 0 | pyridoxamine-phosphate oxidase |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YDR158W | HOM2 | 1 | 0 | aspartate-semialdehyde dehydrogenase |
| YFL030W | 2 | 0 | similarity to several transaminases (Class III) |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| Cluster | BI0369: |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YLR421C | RPN13 | 1 | 0 | weak similarity to human 42K membrane glycoprotein (Class III) |
| YGR232W | NAS6 | 3 | 0 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| YBR272C | HSM3 | 2 | 0 | mismatch repair protein |
| Cluster | BI0370: |
| YJL165C | HAL5 | 0 | 0 | ser/thr protein kinase |
| YOL103W | ITR2 | 0 | 0 | myo-inositol permease, minor |
| Cluster | BI0371: |
| YLR019W | PSR2 | 2 | 0 | plasma membrane phosphatase required for sodium stress response |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| Cluster | BI0372: |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| YDL113C | 4 | 0 | similarity to hypothetical protein YDR425W (Class IV) |
| Cluster | BI0373: |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YNL223W | AUT2 | 3 | 0 | essential for autophagy |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| Cluster | BI0374: |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YCR053W | THR4 | 0 | 0 | threonine synthase (o-p-homoserine p-lyase) |
| Cluster | BI0376: |
| YLR340W | RPP0 | 4 | 0 | acidic ribosomal protein L10.e |
| YGL068W | 0 | 0 | strong similarity to Cricetus mitochrondial ribosomal L12 protein (Class II) |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YER067W | 2 | 0 | strong similarity to hypothetical protein YIL057C (Class IV) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YHR087W | 1 | 0 | weak similarity to PIR:T50363 hypothetical protein SPBC21C3.19 S.pombe (Class IV) |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| Cluster | BI0377: |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YGR209C | TRX2 | 2 | 0 | thioredoxin II |
| Cluster | BI0378: |
| YCR091W | KIN82 | 0 | 0 | ser/thr protein kinase |
| YNR047W | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| Cluster | BI0379: |
| YML064C | TEM1 | 73 | 0 | GTP-binding protein of the RAS superfamily |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YKL010C | UFD4 | 1 | 0 | similarity to rat ubiquitin ligase Nedd4 (Class III) |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0380: |
| YBR136W | MEC1 | 2 | 0 | cell cycle checkpoint protein |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0382: |
| YIL113W | 2 | 1 | strong similarity to dual-specificity phosphatase MSG5P (Class II) |
| YIL113W | 2 | 1 | strong similarity to dual-specificity phosphatase MSG5P (Class II) |
| YHR030C | SLT2 | 11 | 1 | ser/thr protein kinase of MAP kinase family |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| Cluster | BI0383: |
| YAR007C | RFA1 | 4 | 0 | DNA replication factor A, 69 KD subunit |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YER078C | 4 | 0 | similarity to E.coli X-Pro aminopeptidase II (Class III) |
| Cluster | BI0384: |
| YNL175C | NOP13 | 2 | 0 | similarity to S.pombe Rnp24p, NSR1P and human splicing factor (Class III) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YKL172W | EBP2 | 0 | 0 | required for pre-rRNA processing and ribosomal subunit assembly |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| Cluster | BI0385: |
| YDL074C | BRE1 | 1 | 0 | weak similarity to spindle pole body protein NUF1 (Class III) |
| YHR149C | 1 | 0 | similarity to hypothetical protein YGR221C (Class IV) |
| YPL055C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0386: |
| YFL038C | YPT1 | 10 | 1 | GTP-binding protein of the rab family |
| 0 | 0 |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| YPR017C | DSS4 | 4 | 2 | GDP/GTP exchange factor for SEC4P |
| YFL005W | SEC4 | 3 | 2 | GTP-binding protein of the ras superfamily |
| YER136W | GDI1 | 4 | 1 | GDP dissociation inhibitor |
| Cluster | BI0387: |
| YMR198W | CIK1 | 1 | 0 | spindle pole body associated protein |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0388: |
| YDL043C | PRP11 | 21 | 1 | pre-mRNA splicing factor |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YGR162W | TIF4631 | 6 | 1 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YPR121W | THI22 | 0 | 0 | similarity to B.subtilis transcriptional activator tenA (Class III) |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YLR059C | REX2 | 1 | 0 | putative 3'-5' exonuclease |
| YLR058C | SHM2 | 2 | 0 | serine hydroxymethyltransferase, cytoplasmic |
| YGR250C | 3 | 0 | weak similarity to human cleavage stimulation factor 64K chain (Class III) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| Cluster | BI0389: |
| YNL317W | PFS2 | 6 | 0 | polyadenylation factor I subunit 2 required for mRNA 3'-end processing, bridges two mRNA 3'-end processing factors |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| Cluster | BI0390: |
| YGR173W | 4 | 1 | strong similarity to human GTP-binding protein (Class II) |
| YGR173W | 4 | 1 | strong similarity to human GTP-binding protein (Class II) |
| YDR152W | 3 | 1 | weak similarity to C.elegans hypothetical protein CET26E3 (Class IV) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0391: |
| YDR146C | SWI5 | 3 | 0 | transcription factor |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YBR081C | SPT7 | 13 | 2 | involved in alteration of transcription start site selection |
| YGR002C | 0 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YHR099W | TRA1 | 15 | 2 | component of the Ada-Spt transcriptional regulatory complex |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YPL254W | HFI1 | 13 | 2 | transcriptional coactivator |
| YMR019W | STB4 | 1 | 0 | weak similarity to YIL130W, PUT3P and other transcription factors (Class III) |
| YER015W | FAA2 | 0 | 0 | long-chain-fatty-acid--CoA ligase |
| Cluster | BI0392: |
| YML057W | CMP2 | 2 | 0 | calcineurin B, catalytic subunit |
| YKL190W | CNB1 | 2 | 0 | calcineurin B, regulatory subunit |
| Cluster | BI0393: |
| YHR073W | OSH3 | 1 | 0 | similarity to OSH1P, YDL019C and mammalian oxysterol-binding protei (Class III) |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| Cluster | BI0394: |
| YHR119W | SET1 | 3 | 0 | involved in chromatin-mediated gene regulation |
| YLR015W | BRE2 | 2 | 0 | weak similarity to S.pombe hypothetical protein SPBC13G1 (Class IV) |
| Cluster | BI0395: |
| YOR090C | PTC5 | 0 | 0 | putative 2C protein phosphatase (PP2Cs) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| Cluster | BI0396: |
| YPL235W | RVB2 | 1 | 1 | RUVB-like protein |
| YDR190C | RVB1 | 2 | 1 | RUVB-like protein |
| Cluster | BI0397: |
| YPL026C | SKS1 | 1 | 0 | suppressor kinase of SNF3 |
| YPL028W | ERG10 | 0 | 0 | acetyl-CoA C-acetyltransferase, cytosolic |
| Cluster | BI0398: |
| YIL147C | SLN1 | 1 | 0 | two-component signal transducer |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| Cluster | BI0400: |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YER083C | 3 | 0 | hypothetical protein (Class V) |
| YGL020C | 0 | 0 | weak similarity to TRCDSEMBL:SPBC543_10 putative coiled-coil protein S. pombe (Class IV) |
| YML048W | GSF2 | 1 | 0 | involved in glucose repression |
| Cluster | BI0401: |
| YOR125C | CAT5 | 0 | 0 | involved in coenzyme Q (ubiquinone) biosynthesis |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YJL068C | 1 | 0 | strong similarity to human esterase D (Class II) |
| Cluster | BI0402: |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| Cluster | BI0403: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YJR065C | ARP3 | 6 | 5 | actin related protein |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YLL013C | PUF3 | 2 | 0 | transcript-specific regulator of mRNA degradation |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0404: |
| YHR188C | GPI16 | 3 | 0 | similarity to hypothetical C. elegans proteins F17c11.7 (Class IV) |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YDL137W | ARF2 | 0 | 0 | GTP-binding protein of the ARF family |
| Cluster | BI0405: |
| YGR040W | KSS1 | 7 | 3 | ser/thr protein kinase of the MAP kinase family |
| YOL078W | 0 | 0 | similarity to stress activated MAP kinase interacting protein S. pombe (Class III) |
| YER093C | 3 | 0 | weak similarity to S.epidermidis PepB protein (Class III) |
| YHR084W | STE12 | 2 | 2 | transcriptional activator |
| YBR083W | TEC1 | 0 | 0 | Ty transcription activator |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YLR362W | STE11 | 16 | 1 | ser/thr protein kinase of the MEKK family |
| YPL049C | DIG1 | 8 | 3 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YDR480W | DIG2 | 6 | 3 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YPL115C | BEM3 | 0 | 0 | GTPase-activating protein for CDC42P and RHO1P |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| Cluster | BI0406: |
| YIL046W | MET30 | 12 | 2 | involved in regulation of sulfur assimilation genes and cell cycle progression |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 2 | controls G1/S transition |
| YOL133W | HRT1 | 4 | 0 | similarity to Lotus RING-finger protein (Class III) |
| Cluster | BI0407: |
| YMR036C | MIH1 | 0 | 0 | M-phase inducing protein tyrosine phosphatase |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| Cluster | BI0408: |
| YDR316W | 0 | 0 | similarity to hypothetical ubiquitin system protein S.pombe (Class IV) |
| YDR316W | 0 | 0 | similarity to hypothetical ubiquitin system protein S.pombe (Class IV) |
| YFL053W | DAK2 | 0 | 0 | dihydroxyacetone kinase |
| YLR447C | VMA6 | 88 | 0 | H+-ATPase V0 domain 36 KD subunit, vacuolar |
| YPR121W | THI22 | 0 | 0 | similarity to B.subtilis transcriptional activator tenA (Class III) |
| YBL104C | 1 | 0 | weak similarity to S.pombe hypothetical protein SPAC12G12.01c (Class IV) |
| YGR041W | BUD9 | 1 | 0 | budding protein |
| Cluster | BI0409: |
| YOL133W | HRT1 | 4 | 0 | similarity to Lotus RING-finger protein (Class III) |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YDR009W | GAL3 | 1 | 0 | galactokinase |
| YBR078W | ECM33 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YJL020C | BBC1 | 0 | 0 | similarity to S.pombe hypothetical protein SPAC23A1.16 (Class IV) |
| YLL040C | VPS13 | 0 | 0 | involved in regulating membrane traffic |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YPL036W | PMA2 | 2 | 0 | H+-transporting P-type ATPase, minor isoform, plasma membrane |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YAR009C | 0 | 0 |
| YNL160W | YGP1 | 1 | 0 | secreted glycoprotein |
| YBR208C | DUR1,2 | 0 | 0 | urea amidolyase |
| YCR093W | CDC39 | 4 | 0 | nuclear protein |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| YPR164W | KIM3 | 0 | 0 | drug resistance |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YGR218W | CRM1 | 38 | 0 | nuclear export factor, exportin |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YLR035C-A | 0 | 0 |
| Cluster | BI0410: |
| YNL090W | RHO2 | 1 | 0 | GTP-binding protein of the RHO subfamily of RAS-like proteins |
| YNL210W | MER1 | 2 | 0 | meiotic recombination protein |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| Cluster | BI0411: |
| YLR229C | CDC42 | 13 | 0 | GTP-binding protein of RAS superfamily |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| Cluster | BI0412: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| YAL016W | TPD3 | 3 | 1 | ser/thr protein phosphatase 2A, regulatory chain A |
| YDL134C | PPH21 | 6 | 1 | protein ser/thr phosphatase PP2A-1 |
| YPL258C | THI21 | 1 | 0 | similarity to B.subtilis transcriptional activator tenA, and strong similarity to hypothetical proteins YOL055C and YPR121W (Class III) |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| Cluster | BI0413: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YGL122C | NAB2 | 8 | 2 | nuclear poly(A)-binding protein |
| YKL009W | MRT4 | 1 | 0 | mRNA turnover 4 |
| YNL035C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YPL266W | DIM1 | 1 | 0 | rRNA (adenine-N6,N6-)-dimethyltransferase |
| Cluster | BI0414: |
| YOR351C | MEK1 | 1 | 0 | ser/thr protein kinase |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0415: |
| YNL175C | NOP13 | 2 | 0 | similarity to S.pombe Rnp24p, NSR1P and human splicing factor (Class III) |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YKR024C | DBP7 | 1 | 0 | RNA helicase required for 60S ribosomal subunit assembly |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YKL172W | EBP2 | 0 | 0 | required for pre-rRNA processing and ribosomal subunit assembly |
| YHR216W | IMD2 | 3 | 0 | IMP dehydrogenase |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| Cluster | BI0416: |
| YPR178W | PRP4 | 4 | 0 | U4/U6 snRNP 52 KD protein |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| Cluster | BI0417: |
| YER059W | PCL6 | 7 | 1 | cyclin like protein interacting with PHO85P |
| YPL031C | PHO85 | 14 | 1 | cyclin-dependent protein kinase |
| Cluster | BI0418: |
| YFL008W | SMC1 | 6 | 1 | chromosome segregation protein |
| YJL074C | SMC3 | 3 | 1 | required for structural maintenance of chromosomes |
| Cluster | BI0419: |
| YLR352W | 3 | 1 | hypothetical protein (Class V) |
| YLR352W | 3 | 1 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| Cluster | BI0420: |
| YDL013W | HEX3 | 6 | 0 | hexose metabolism-related protein |
| YNR031C | SSK2 | 1 | 0 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YOR208W | PTP2 | 1 | 0 | protein-tyrosine-phosphatase |
| Cluster | BI0421: |
| YGR200C | ELP2 | 0 | 0 | 90 kDa subunit of elongator and elongating RNA polymerase II holoenzyme |
| YJR127C | ZMS1 | 0 | 0 | transcription factor with similarity to regulatory protein ARD1P |
| YLR384C | IKI3 | 1 | 0 | confers sensitivity to killer toxin |
| YNL078W | JIP1 | 7 | 0 | hypothetical protein (Class V) |
| YPL086C | ELP3 | 0 | 0 | subunit of elongator/RNAPII holoenzyme with histone acetylase activity |
| Cluster | BI0422: |
| YER007W | PAC2 | 2 | 0 | involved in the stabilization of microtubles |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0423: |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YPR040W | SDF1 | 8 | 0 | similarity to C.elegans C02C2.6 protein (Class IV) |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| Cluster | BI0424: |
| YLR248W | RCK2 | 1 | 0 | Ca/calmodulin-dependent ser/thr protein kinase |
| YDR080W | VPS41 | 1 | 0 | required for the vacuolar assembly |
| Cluster | BI0425: |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR340C | RPA43 | 1 | 0 | DNA-directed RNA polymerase I, 36 KD subunit |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| Cluster | BI0426: |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YBL091C | MAP2 | 0 | 0 | methionine aminopeptidase, isoform 2 |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YCL042W | 0 | 0 | questionable ORF (Class VI) |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YBR087W | RFC5 | 3 | 0 | DNA replication factor C, 40 KD subunit |
| YFR004W | RPN11 | 3 | 0 | 26S proteasome regulatory subunit |
| YLR058C | SHM2 | 2 | 0 | serine hydroxymethyltransferase, cytoplasmic |
| YBR087W | RFC5 | 3 | 0 | DNA replication factor C, 40 KD subunit |
| Cluster | BI0427: |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YDR129C | SAC6 | 1 | 0 | actin filament bundling protein, fimbrin |
| YLR019W | PSR2 | 2 | 0 | plasma membrane phosphatase required for sodium stress response |
| Cluster | BI0428: |
| YBR288C | APM3 | 2 | 0 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YPL195W | APL5 | 1 | 0 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| Cluster | BI0429: |
| YGL213C | SKI8 | 5 | 1 | antiviral protein of the beta-transducin (WD-40) repeat family |
| YLR398C | SKI2 | 0 | 0 | antiviral protein and putative helicase |
| YBR059C | AKL1 | 7 | 1 | Ark-family Kinase-Like protein |
| YPR189W | SKI3 | 0 | 0 | antiviral protein |
| Cluster | BI0430: |
| YJL187C | SWE1 | 2 | 1 | ser/tyr dual-specifity protein kinase |
| YHR158C | KEL1 | 5 | 0 | involved in cell fusion and morphology |
| YPR119W | CLB2 | 12 | 0 | cyclin, G2/M-specific |
| YOR023C | AHC1 | 4 | 0 | component of the ADA histone acetyltransferase complex |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YBR133C | HSL7 | 5 | 1 | adapter in a regulatory pathway that relieves tyrosine phosphorylation of CDC28 |
| Cluster | BI0431: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| Cluster | BI0432: |
| YDR099W | BMH2 | 5 | 0 | suppressor of clathrin deficiency |
| YPR030W | CSR2 | 1 | 0 | similarity to YBL101C (Class IV) |
| Cluster | BI0433: |
| YOL115W | TRF4 | 6 | 1 | topoisomerase I-related protein |
| YPL146C | 2 | 0 | weak similarity to myosin heavy chain proteins (Class III) |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| YDL175C | 2 | 0 | weak similarity to cellular nucleic acid binding proteins (Class III) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YAR073W | IMD1 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YJL050W | MTR4 | 0 | 0 | involved in nucleocytoplasmic transport of mRNA |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YIL079C | 1 | 1 | strong similarity to hypothetical protein YDL175C (Class IV) |
| Cluster | BI0434: |
| YGL081W | 0 | 0 | hypothetical protein (Class V) |
| YGL081W | 0 | 0 | hypothetical protein (Class V) |
| YFR015C | GSY1 | 6 | 0 | UDP glucose--starch glucosyltransferase, isoform 1 |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGR184C | UBR1 | 1 | 0 | ubiquitin-protein ligase |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YOL094C | RFC4 | 1 | 0 | DNA replication factor C, 37 kDa subunit |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YJL074C | SMC3 | 3 | 0 | required for structural maintenance of chromosomes |
| Cluster | BI0435: |
| YOL126C | MDH2 | 1 | 0 | malate dehydrogenase, cytoplasmic |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| Cluster | BI0436: |
| YNL189W | SRP1 | 140 | 4 | karyopherin-alpha or importin |
| YOL021C | DIS3 | 5 | 2 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YDR289C | RTT103 | 0 | 0 | regulator of Ty1 Transposition |
| YBR103W | SIF2 | 8 | 0 | SIR4P interacting protein |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YDR240C | SNU56 | 0 | 0 | U1 snRNA protein, no counterpart in mammalian snRNP |
| YAR002W | NUP60 | 0 | 0 | peroxisomal matrix protein import |
| YKR002W | PAP1 | 10 | 1 | poly(A) polymerase |
| YLR347C | KAP95 | 35 | 3 | karyopherin-beta |
| YLR335W | NUP2 | 6 | 2 | nuclear pore protein |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YPR090W | 0 | 0 | weak similarity to hypothetical protein SPAC25B8.08 S. pombe (Class IV) |
| YOR098C | NUP1 | 8 | 2 | nuclear pore protein |
| YML062C | MFT1 | 1 | 0 | mitochondrial fusion target protein |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YOR001W | RRP6 | 1 | 0 | similarity to human nucleolar 100K polymyositis-scleroderma protein (Class III) |
| YJR093C | FIP1 | 10 | 1 | component of pre-mRNA polyadenylation factor PF I |
| YCR035C | RRP43 | 6 | 2 | rRNA processing protein |
| YHR086W | NAM8 | 0 | 0 | meiotic recombination protein |
| YMR239C | RNT1 | 1 | 1 | double-stranded ribonuclease |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YBR049C | REB1 | 0 | 0 | transcription factor |
| YHR069C | RRP4 | 4 | 2 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YPR023C | EAF3 | 0 | 0 | similarity to human hypothetical protein (Class IV) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YGR202C | PCT1 | 0 | 0 | cholinephosphate cytidylyltransferase |
| YGR264C | MES1 | 1 | 0 | methionyl-tRNA synthetase |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YHR099W | TRA1 | 15 | 0 | component of the Ada-Spt transcriptional regulatory complex |
| YPL139C | UME1 | 1 | 0 | negative regulator of meiosis |
| Cluster | BI0437: |
| YNL106C | INP52 | 0 | 0 | phosphatidylinositol phosphate phosphatase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YDR279W | 3 | 0 | hypothetical protein (Class V) |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YJR105W | ADO1 | 1 | 0 | strong similarity to human adenosine kinase (Class II) |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YKR028W | SAP190 | 3 | 0 | SIT4P-associated protein |
| Cluster | BI0438: |
| YNL311C | 3 | 1 | hypothetical protein (Class V) |
| YNL311C | 3 | 1 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| Cluster | BI0439: |
| YAL036C | FUN11 | 5 | 0 | strong similarity to GTP-binding proteins (Class II) |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| Cluster | BI0440: |
| YCR084C | TUP1 | 3 | 1 | general transcription repressor |
| YBR112C | CYC8 | 4 | 1 | general repressor of transcription |
| Cluster | BI0441: |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0442: |
| YOR353C | 3 | 1 | weak similarity to adenylate cyclases (Class III) |
| YOR353C | 3 | 1 | weak similarity to adenylate cyclases (Class III) |
| YHR102W | KIC1 | 10 | 1 | ser/thr protein kinase that interacts with CDC31P |
| Cluster | BI0443: |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0444: |
| YOR230W | WTM1 | 1 | 0 | transcriptional modulator |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YOR229W | WTM2 | 3 | 0 | transcriptional modulator |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| Cluster | BI0445: |
| YIL035C | CKA1 | 4 | 0 | casein kinase II, catalytic alpha chain |
| YIL033C | BCY1 | 6 | 0 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0446: |
| YPR017C | DSS4 | 4 | 2 | GDP/GTP exchange factor for SEC4P |
| YFL038C | YPT1 | 10 | 1 | GTP-binding protein of the rab family |
| YFL005W | SEC4 | 3 | 1 | GTP-binding protein of the ras superfamily |
| Cluster | BI0447: |
| YBL021C | HAP3 | 4 | 0 | CCAAT-binding factor subunit |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| Cluster | BI0448: |
| YDR142C | PEX7 | 7 | 0 | peroxisomal import protein - peroxin |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YBR179C | FZO1 | 1 | 0 | required for biogenesis of mitochondria |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| YPL226W | NEW1 | 0 | 0 | similarity to translation elongation factor eEF3 (Class III) |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YGR184C | UBR1 | 1 | 0 | ubiquitin-protein ligase |
| Cluster | BI0449: |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YIL033C | BCY1 | 6 | 0 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0450: |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| YAL016W | TPD3 | 3 | 1 | ser/thr protein phosphatase 2A, regulatory chain A |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YDL134C | PPH21 | 6 | 1 | protein ser/thr phosphatase PP2A-1 |
| Cluster | BI0451: |
| YLL019C | KNS1 | 1 | 0 | ser/thr protein kinase |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| Cluster | BI0452: |
| YHR120W | MSH1 | 0 | 0 | DNA mismatch repair protein, mitochondrial |
| YLR163C | MAS1 | 0 | 0 | mitochondrial processing peptidase |
| Cluster | BI0453: |
| YDL134C | PPH21 | 6 | 3 | protein ser/thr phosphatase PP2A-1 |
| YPR110C | RPC40 | 6 | 0 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YHR075C | PPE1 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YAL016W | TPD3 | 3 | 2 | ser/thr protein phosphatase 2A, regulatory chain A |
| YDL188C | PPH22 | 2 | 1 | protein ser/thr phosphatase PP2A-2 |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| YOR014W | RTS1 | 6 | 2 | potential regulatory subunit of protein phosphatase 2A |
| YGR161C | 0 | 0 | hypothetical protein (Class V) |
| YMR028W | TAP42 | 3 | 2 | component of the Tor signaling pathway |
| Cluster | BI0454: |
| YOL108C | INO4 | 5 | 0 | basic helix-loop-helix transcription factor |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YPL211W | NIP7 | 3 | 0 | required for efficient 60S ribosome subunit biogenesis |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| Cluster | BI0455: |
| YDL047W | SIT4 | 4 | 3 | ser/thr protein phosphatase |
| YKR028W | SAP190 | 3 | 1 | SIT4P-associated protein |
| YHR096C | HXT5 | 1 | 0 | member of the hexose transporter family |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YMR028W | TAP42 | 3 | 1 | component of the Tor signaling pathway |
| Cluster | BI0457: |
| YLR403W | SFP1 | 2 | 0 | zinc finger protein |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| Cluster | BI0458: |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| YBR280C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YPL258C | THI21 | 1 | 0 | similarity to B.subtilis transcriptional activator tenA, and strong similarity to hypothetical proteins YOL055C and YPR121W (Class III) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| Cluster | BI0459: |
| YJR052W | RAD7 | 2 | 0 | nucleotide excision repair protein |
| YPL046C | ELC1 | 0 | 0 | Elongin C transcription elongation factor |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0460: |
| YOL094C | RFC4 | 1 | 0 | DNA replication factor C, 37 kDa subunit |
| YDR143C | SAN1 | 0 | 0 | mating-type regulation protein |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YJR068W | RFC2 | 2 | 0 | DNA replication factor C, 41 KD subunit |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| YOR144C | EFD1 | 0 | 0 | weak similarity to human DNA-binding protein PO-GA and to bacterial H+-transporting ATP synthases (Class III) |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YJR068W | RFC2 | 2 | 0 | DNA replication factor C, 41 KD subunit |
| Cluster | BI0461: |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| Cluster | BI0462: |
| YML115C | VAN1 | 2 | 1 | vanadate resistance protein |
| YEL002C | WBP1 | 2 | 0 | oligosaccharyl transferase beta subunit precursor |
| YBR205W | KTR3 | 4 | 0 | alpha-1,2-mannosyltransferase |
| YDL052C | SLC1 | 1 | 0 | fatty acyltransferase |
| YPL050C | MNN9 | 4 | 1 | required for complex N-glycosylation |
| Cluster | BI0463: |
| YLR113W | HOG1 | 5 | 0 | ser/thr protein kinase of MAP kinase (MAPK) family |
| YDR359C | VID21 | 0 | 0 | weak similarity to human trichohyalin (Class III) |
| YLR248W | RCK2 | 1 | 0 | Ca/calmodulin-dependent ser/thr protein kinase |
| Cluster | BI0464: |
| YNL135C | FPR1 | 4 | 1 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YER052C | HOM3 | 6 | 1 | L-aspartate 4-P-transferase |
| YOR319W | HSH49 | 7 | 0 | essential yeast splicing factor |
| Cluster | BI0465: |
| YER161C | SPT2 | 7 | 0 | multifunctional HMG-like chromatin protein |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YIL035C | CKA1 | 4 | 2 | casein kinase II, catalytic alpha chain |
| YHR216W | IMD2 | 3 | 0 | IMP dehydrogenase |
| YOR061W | CKA2 | 4 | 2 | casein kinase II alpha' chain |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| Cluster | BI0466: |
| YGR040W | KSS1 | 7 | 3 | ser/thr protein kinase of the MAP kinase family |
| YDR239C | 0 | 0 | hypothetical protein (Class V) |
| YPR115W | 2 | 0 | similarity to probable transcription factor ASK10P, and to YNL047C and YIL105C (Class III) |
| YDR480W | DIG2 | 6 | 3 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YPR034W | ARP7 | 0 | 0 | component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YGL062W | PYC1 | 0 | 0 | pyruvate carboxylase 1 |
| YBR083W | TEC1 | 0 | 0 | Ty transcription activator |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YOL033W | MSE1 | 0 | 0 | glutamyl-tRNA synthetase, mitochondrial |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YDL159W | STE7 | 6 | 1 | ser/thr/tyr protein kinase of MAP kinase kinase family |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YLR430W | SEN1 | 1 | 0 | positive effector of tRNA-splicing endonuclease |
| YHR084W | STE12 | 2 | 2 | transcriptional activator |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YHR200W | RPN10 | 2 | 0 | 26S proteasome regulatory subunit |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YPL049C | DIG1 | 8 | 3 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| Cluster | BI0467: |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YCR088W | ABP1 | 4 | 0 | actin-binding protein |
| Cluster | BI0468: |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YDR300C | PRO1 | 1 | 0 | glutamate 5-kinase |
| YGL105W | ARC1 | 2 | 0 | protein with specific affinity for G4 quadruplex nucleic acids |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YPL262W | FUM1 | 0 | 0 | fumarate hydratase |
| Cluster | BI0469: |
| YML064C | TEM1 | 73 | 0 | GTP-binding protein of the RAS superfamily |
| YKL080W | VMA5 | 1 | 0 | H+-ATPase V1 domain 42 KD subunit, vacuolar |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| YAL003W | EFB1 | 3 | 0 | translation elongation factor eEF1beta |
| Cluster | BI0470: |
| YOL113W | SKM1 | 2 | 0 | STE20/PAK-like protein kinase |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| YAL016W | TPD3 | 3 | 0 | ser/thr protein phosphatase 2A, regulatory chain A |
| YLR450W | HMG2 | 0 | 0 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 |
| Cluster | BI0471: |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YHR197W | 2 | 0 | weak similarity to PIR:T22172 hypothetical protein F44E5.2 C. elegans (Class IV) |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| Cluster | BI0472: |
| YIR034C | LYS1 | 2 | 0 | saccharopine dehydrogenase |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YLR354C | TAL1 | 1 | 0 | transaldolase |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| Cluster | BI0473: |
| YCR002C | CDC10 | 6 | 2 | cell division control protein |
| YJR076C | CDC11 | 6 | 2 | septin |
| YLR314C | CDC3 | 5 | 2 | cell division control protein |
| Cluster | BI0474: |
| YPL031C | PHO85 | 14 | 1 | cyclin-dependent protein kinase |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| YIL050W | PCL7 | 6 | 1 | cyclin like protein interacting with PHO85P |
| Cluster | BI0475: |
| YER161C | SPT2 | 7 | 0 | multifunctional HMG-like chromatin protein |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YLR293C | GSP1 | 12 | 0 | GTP-binding protein of the ras superfamily |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGR155W | CYS4 | 2 | 1 | cystathionine beta-synthase |
| YBR143C | SUP45 | 4 | 0 | translational release factor |
| YLR389C | STE23 | 1 | 0 | protease involved in a-factor processing |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YER082C | KRE31 | 2 | 0 | similarity to M.sexta steroid regulated MNG10 protein (Class III) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YDR091C | RLI1 | 3 | 0 | strong similarity to human RNase L inhibitor and M.jannaschii ABC transporter protein (Class II) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| Cluster | BI0476: |
| YLR262C | YPT6 | 1 | 0 | GTP-binding protein of the rab family |
| 0 | 0 |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| Cluster | BI0477: |
| YNL068C | FKH2 | 0 | 0 | homology to D.melanogaster forkhead protein |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YGL150C | INO80 | 2 | 0 | similarity to SNF2P and human SNF2alpha (Class III) |
| Cluster | BI0478: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YGR154C | 1 | 0 | strong similarity to hypothetical proteins YKR076W and YMR251W (Class IV) |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YNL093W | YPT53 | 1 | 0 | GTP-binding protein of the RAB family (RAS superfamily) |
| YPR121W | THI22 | 0 | 0 | similarity to B.subtilis transcriptional activator tenA (Class III) |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YJL207C | 0 | 0 | weak similarity to rat omega-conotoxin-sensitive calcium channel alpha-1 subunit rbB-I (Class III) |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YNL334C | SNO2 | 5 | 0 | strong similarity to hypothetical proteins YFL060C and YMR095C (Class IV) |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YBR028C | 1 | 0 | similarity to ribosomal protein kinases (Class III) |
| YNL025C | SSN8 | 5 | 0 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog |
| YER123W | YCK3 | 1 | 0 | casein kinase, isoform 3 |
| YNL154C | YCK2 | 8 | 0 | casein kinase I isoform |
| YIR034C | LYS1 | 2 | 0 | saccharopine dehydrogenase |
| YGR111W | 2 | 0 | weak similarity to mosquito carboxylesterase (Class III) |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| Cluster | BI0479: |
| YNL307C | MCK1 | 3 | 0 | ser/thr/tyr protein kinase |
| YDL112W | TRM3 | 0 | 0 | tRNA (guanosine-2'-O-)-methyltransferase |
| YIL105C | 8 | 0 | weak similarity to probable transcription factor ASK10P (Class III) |
| YOR266W | PNT1 | 2 | 0 | pentamidine resistance factor |
| Cluster | BI0480: |
| YDR365C | 1 | 0 | weak similarity to Streptococcus M protein (Class III) |
| YDR365C | 1 | 0 | weak similarity to Streptococcus M protein (Class III) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YNR054C | 0 | 0 | similarity to C.elegans hypothetical protein CEESL47F (Class IV) |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YIL035C | CKA1 | 4 | 2 | casein kinase II, catalytic alpha chain |
| YDR102C | 2 | 0 | hypothetical protein (Class V) |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| YCR087W | 2 | 0 | questionable ORF (Class VI) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YOR061W | CKA2 | 4 | 2 | casein kinase II alpha' chain |
| YJL207C | 0 | 0 | weak similarity to rat omega-conotoxin-sensitive calcium channel alpha-1 subunit rbB-I (Class III) |
| Cluster | BI0481: |
| YKL103C | LAP4 | 10 | 1 | aminopeptidase yscI precursor, vacuolar |
| YOL082W | CVT19 | 18 | 2 | similarity to YOL083W (Class IV) |
| YGL156W | AMS1 | 2 | 1 | alpha-mannosidase |
| YFL034W | 0 | 0 | similarity to hypothetical S. pombe protein and to C.elegans F35D11 protein (Class IV) |
| Cluster | BI0482: |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YLR359W | ADE13 | 0 | 0 | adenylosuccinate lyase |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YDL116W | NUP84 | 19 | 1 | nuclear pore protein |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YGL092W | NUP145 | 10 | 2 | nuclear pore protein |
| Cluster | BI0483: |
| YDL003W | MCD1 | 2 | 2 | Mitotic Chromosome Determinant |
| YFL008W | SMC1 | 6 | 3 | chromosome segregation protein |
| YJL074C | SMC3 | 3 | 3 | required for structural maintenance of chromosomes |
| YIL026C | IRR1 | 3 | 2 | essential protein |
| Cluster | BI0484: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YNL172W | APC1 | 10 | 0 | subunit of anaphase-promoting complex (cyclosome) |
| Cluster | BI0485: |
| YDR219C | 0 | 0 | hypothetical protein (Class V) |
| YDR219C | 0 | 0 | hypothetical protein (Class V) |
| YHR122W | 4 | 0 | similarity to hypothetical C. elegans protein F45G2.a (Class IV) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0486: |
| YDL047W | SIT4 | 4 | 4 | ser/thr protein phosphatase |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YMR028W | TAP42 | 3 | 1 | component of the Tor signaling pathway |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YMR196W | 0 | 0 | strong similarity to hypothetical protein Neurospora crassa (Class IV) |
| YML048W | GSF2 | 1 | 0 | involved in glucose repression |
| YMR145C | NDH1 | 0 | 0 | mitochondrial cytosolically directed NADH dehydrogenase |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YGR282C | BGL2 | 0 | 0 | endo-beta-1,3-glucanase of the cell wall |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YDL171C | GLT1 | 0 | 0 | glutamate synthase (NAPDPH) (GOGAT) |
| YKL029C | MAE1 | 2 | 0 | malic enzyme |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDR465C | RMT2 | 4 | 0 | N-delta-arginine methyltransferase |
| YOR317W | FAA1 | 4 | 0 | long-chain-fatty-acid--CoA ligase |
| YKR028W | SAP190 | 3 | 1 | SIT4P-associated protein |
| YOR259C | RPT4 | 3 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0487: |
| YJR022W | LSM8 | 28 | 1 | splicing factor |
| YPR191W | QCR2 | 6 | 0 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YDL111C | RRP42 | 5 | 0 | rRNA processing protein |
| YBL026W | LSM2 | 15 | 1 | Sm-like (Lsm) protein |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YER029C | SMB1 | 8 | 0 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YCL050C | APA1 | 1 | 0 | ATP adenylyltransferase I |
| YHR089C | GAR1 | 5 | 0 | nucleolar rRNA processing protein |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YGL117W | 0 | 0 | hypothetical protein (Class V) |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0488: |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YGR083C | GCD2 | 1 | 0 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YDR021W | FAL1 | 1 | 0 | involved in maturation of 18S rRNA |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YGR162W | TIF4631 | 6 | 2 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 1 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YKR026C | GCN3 | 15 | 0 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| Cluster | BI0489: |
| YBL056W | PTC3 | 2 | 1 | ser/thr protein phosphatase PP2C |
| YGR205W | 4 | 0 | similarity to S.pombe hypothetical protein D89234 (Class IV) |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YOR086C | 0 | 0 | weak similarity to synaptogamines (Class III) |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| 0 | 0 |
| Cluster | BI0490: |
| YHR166C | CDC23 | 15 | 0 | subunit of anaphase-promoting complex (cyclosome) |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YDR260C | SWM1 | 2 | 0 | developmentally regulated gene, is required for spore wall assembly |
| Cluster | BI0491: |
| YPL153C | RAD53 | 2 | 0 | ser/thr/tyr protein kinase |
| YDL220C | CDC13 | 2 | 0 | cell division control protein |
| YER089C | PTC2 | 1 | 1 | protein serine/threonine phosphatase of the PP2C family |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YPL128C | TBF1 | 2 | 0 | telomere TTAGGG repeat-binding factor 1 |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| YGR270W | YTA7 | 0 | 0 | 26S proteasome subunit |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YJL115W | ASF1 | 0 | 0 | anti-silencing protein |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YJL115W | ASF1 | 0 | 0 | anti-silencing protein |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YJL074C | SMC3 | 3 | 0 | required for structural maintenance of chromosomes |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YER111C | SWI4 | 2 | 0 | transcription factor |
| Cluster | BI0493: |
| YLR006C | SSK1 | 4 | 2 | two-component signal transducer |
| YLR233C | EST1 | 7 | 0 | telomere elongation protein |
| YNR031C | SSK2 | 1 | 1 | MAP kinase kinase kinase of the high osmolarity signal transduction pathway |
| YCR073C | SSK22 | 2 | 1 | MAP kinase kinase kinase |
| Cluster | BI0494: |
| YBR088C | POL30 | 1 | 0 | Proliferating Cell Nuclear Antigen (PCNA) |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YPL140C | MKK2 | 5 | 0 | protein kinase of the map kinase kinase (MEK) family |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| Cluster | BI0495: |
| YGL090W | LIF1 | 4 | 1 | DNA ligase IV interacting factor |
| YLR288C | MEC3 | 82 | 0 | G2-specific checkpoint protein |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YOR061W | CKA2 | 4 | 0 | casein kinase II alpha' chain |
| YOR005C | DNL4 | 1 | 1 | DNA ligase IV |
| Cluster | BI0496: |
| YHR120W | MSH1 | 0 | 0 | DNA mismatch repair protein, mitochondrial |
| YHR024C | MAS2 | 0 | 0 | processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial |
| Cluster | BI0497: |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| Cluster | BI0498: |
| YPR093C | 1 | 0 | weak similarity to zinc-finger proteins (Class III) |
| YPR093C | 1 | 0 | weak similarity to zinc-finger proteins (Class III) |
| YOL005C | RPB11 | 1 | 1 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YIL021W | RPB3 | 8 | 1 | DNA-directed RNA-polymerase II, 45 kDa |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YGL070C | RPB9 | 44 | 0 | DNA-directed RNA polymerase II, 14.2 KD subunit |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| Cluster | BI0499: |
| YKL215C | 0 | 0 | similarity to P. aeruginosa hyuA and hyuB (Class III) |
| YKL215C | 0 | 0 | similarity to P. aeruginosa hyuA and hyuB (Class III) |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| Cluster | BI0500: |
| YDR143C | SAN1 | 0 | 0 | mating-type regulation protein |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YPR019W | CDC54 | 0 | 0 | member of the CDC46P/MCM2P/MCM3P family |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YPL113C | 0 | 0 | similarity to glycerate dehydrogenases (Class III) |
| Cluster | BI0501: |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YCR076C | 3 | 0 | weak similarity to latent transforming growth factor beta binding protein 3' H. sapiens (Class III) |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YBR187W | 3 | 0 | similarity to mouse putative transmembrane protein FT27 (Class III) |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDL160C | DHH1 | 13 | 0 | putative RNA helicase of the DEAD box family |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YPR124W | CTR1 | 0 | 0 | copper transport protein |
| YKL204W | EAP1 | 1 | 0 | translation initiation factor 4E-associated protein |
| YGR142W | BTN2 | 2 | 0 | Gene/protein whose expression is elevated in a btn1 minus/Btn1p lacking yeast strain |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YKR007W | 4 | 0 | weak similarity to Streptococcus protein M5 precursor (Class IV) |
| YPR108W | RPN7 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| Cluster | BI0502: |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YGL019W | CKB1 | 6 | 0 | casein kinase II, beta subunit |
| YHR051W | COX6 | 0 | 0 | cytochrome-c oxidase subunit VI |
| YHR170W | NMD3 | 2 | 0 | nonsense-mediated mRNA decay protein |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YPL009C | 0 | 0 | similarity to M.jannaschii hypothetical protein (Class IV) |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YPL211W | NIP7 | 3 | 0 | required for efficient 60S ribosome subunit biogenesis |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YER126C | KRE32 | 2 | 0 | weak similarity to E.coli colicin N (Class III) |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YHR089C | GAR1 | 5 | 0 | nucleolar rRNA processing protein |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| Cluster | BI0503: |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YJR041C | 0 | 0 | weak similarity to hypothetical protein SPAC2G11.02 S. pombe (Class IV) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| Cluster | BI0504: |
| YDR267C | 2 | 0 | weak similarity to human TAFII100 and other WD-40 repeat containing proteins (Class III) |
| YDR267C | 2 | 0 | weak similarity to human TAFII100 and other WD-40 repeat containing proteins (Class III) |
| YOL111C | 4 | 0 | weak similarity to human ubiquitin-like protein GDX (Class III) |
| Cluster | BI0505: |
| YCR092C | MSH3 | 3 | 0 | DNA mismatch repair protein |
| YNR058W | BIO3 | 3 | 0 | DAPA aminotransferase |
| Cluster | BI0506: |
| YML064C | TEM1 | 73 | 0 | GTP-binding protein of the RAS superfamily |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YBR252W | DUT1 | 4 | 0 | dUTP pyrophosphatase precursor |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YML078W | CPR3 | 0 | 0 | cyclophilin (peptidylprolyl isomerase), mitochondrial |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YGR066C | 3 | 0 | similarity to hypothetical protein YBR105C (Class IV) |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| Cluster | BI0507: |
| YDR335W | MSN5 | 7 | 0 | multicopy supressor of SNF1 mutation |
| YOL051W | GAL11 | 1 | 0 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| Cluster | BI0508: |
| YHR186C | 0 | 0 | similarity to C.elegans hypothetical protein C10C5.6 (Class IV) |
| YHR186C | 0 | 0 | similarity to C.elegans hypothetical protein C10C5.6 (Class IV) |
| YKL119C | VPH2 | 2 | 0 | H+-ATPase assembly protein |
| Cluster | BI0509: |
| YMR022W | QRI8 | 2 | 0 | E2 ubiquitin-conjugation enzyme |
| 0 | 0 |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0510: |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YCL039W | 1 | 0 | similarity to TUP1P general repressor of RNA polymerase II transcription (Class III) |
| YIL097W | FYV10 | 2 | 0 | weak similarity to erythroblast macrophage protein EMP Mus musculus (Class III) |
| YIL017C | VID28 | 0 | 0 | similarity to S. pombe SPAC26H5.04 protein of unknown function (Class IV) |
| YMR135C | 0 | 0 | weak similarity to conserved hypothetical protein S. pombe (Class IV) |
| YGL227W | VID30 | 0 | 0 | weak similarity to human RANBPM NP_005484.1 (Class III) |
| YDR255C | 1 | 0 | weak similarity to hypothetical S.pombe hypothetical protein SPBC29A3 (Class IV) |
| Cluster | BI0511: |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| Cluster | BI0512: |
| YER100W | UBC6 | 3 | 0 | E2 ubiquitin-conjugating enzyme |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YFL038C | YPT1 | 10 | 0 | GTP-binding protein of the rab family |
| YEL055C | POL5 | 0 | 0 | DNA polymerase V |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YPL078C | ATP4 | 3 | 0 | F1F0-ATPase complex, F0 subunit B |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YKL205W | LOS1 | 2 | 0 | pre-tRNA splicing protein |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| Cluster | BI0513: |
| YDR260C | SWM1 | 2 | 0 | developmentally regulated gene, is required for spore wall assembly |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YOR303W | CPA1 | 6 | 0 | arginine-specific carbamoylphosphate synthase, small chain |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YML072C | 0 | 0 | similarity to YOR3141C and YNL087W (Class III) |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| Cluster | BI0514: |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YIL033C | BCY1 | 6 | 3 | cAMP dependent protein kinase, regulatory subunit |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| Cluster | BI0515: |
| YER177W | BMH1 | 1 | 0 | 14-3-3 protein involved in rapamycin-sensitive signalling |
| YER114C | BOI2 | 2 | 0 | budding protein |
| YDR017C | KCS1 | 1 | 0 | potential transcription factor of the BZIP type |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YBL034C | STU1 | 1 | 0 | mitotic spindle protein |
| YFR017C | 4 | 0 | hypothetical protein (Class V) |
| YDR001C | NTH1 | 1 | 0 | neutral trehalase (alpha,alpha-trehalase) |
| YIL028W | 1 | 0 | hypothetical protein (Class V) |
| YPR030W | CSR2 | 1 | 0 | similarity to YBL101C (Class IV) |
| YLR258W | GSY2 | 5 | 0 | UDP-glucose--starch glucosyltransferase, isoform 2 |
| YDR006C | SOK1 | 1 | 0 | high copy suppressor of a cyclic AMP-dependent protein kinase mutant |
| YPL032C | SVL3 | 2 | 0 | strong similarity to PAM1P (Class II) |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YDL117W | CYK3 | 0 | 0 | similarity to hypothetical S. pombe protein, protein possibly involved in cytokinesis (Class IV) |
| YIL159W | BNR1 | 3 | 0 | regulator of budding |
| Cluster | BI0516: |
| YGL035C | MIG1 | 3 | 0 | transcriptional repressor |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| Cluster | BI0517: |
| YIL143C | SSL2 | 2 | 0 | DNA helicase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| Cluster | BI0518: |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YJL107C | 2 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| Cluster | BI0519: |
| YPR018W | RLF2 | 3 | 0 | chromatin assembly complex, subunit p90 |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| Cluster | BI0521: |
| YCR077C | PAT1 | 20 | 4 | topoisomerase II-associated protein |
| YNL118C | DCP2 | 5 | 0 | suppressor protein of a yeast pet mutant |
| YJL124C | LSM1 | 10 | 3 | Sm-like (Lsm) protein |
| YGL121C | 0 | 0 | hypothetical protein (Class V) |
| YDL160C | DHH1 | 13 | 1 | putative RNA helicase of the DEAD box family |
| YER112W | LSM4 | 14 | 3 | Sm-like (Lsm) protein |
| YER112W | LSM4 | 14 | 3 | Sm-like (Lsm) protein |
| YNL147W | LSM7 | 10 | 3 | Sm-like (Lsm) protein |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| YJL124C | LSM1 | 10 | 3 | Sm-like (Lsm) protein |
| YNL118C | DCP2 | 5 | 0 | suppressor protein of a yeast pet mutant |
| YDL160C | DHH1 | 13 | 1 | putative RNA helicase of the DEAD box family |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| Cluster | BI0522: |
| YCR079W | 1 | 0 | weak similarity to A.thaliana protein phosphatase 2C (Class III) |
| YCR079W | 1 | 0 | weak similarity to A.thaliana protein phosphatase 2C (Class III) |
| YOR323C | PRO2 | 0 | 0 | gamma-glutamyl phosphate reductase |
| YPL022W | RAD1 | 2 | 0 | component of the nucleotide excision repairosome |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YKL054C | VID31 | 0 | 0 | similarity to glutenin, high molecular weight chain proteins and SNF5P (Class III) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YGL062W | PYC1 | 0 | 0 | pyruvate carboxylase 1 |
| YOR317W | FAA1 | 4 | 0 | long-chain-fatty-acid--CoA ligase |
| YPL110C | 1 | 0 | similarity to C.elegans hypothetical protein, weak similarity to PHO81P (Class III) |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YPL160W | CDC60 | 0 | 0 | leucine--tRNA ligase, cytosolic |
| Cluster | BI0523: |
| YJL005W | CYR1 | 1 | 1 | adenylate cyclase |
| YNL138W | SRV2 | 3 | 1 | adenylate cyclase-associated protein, 70kDa |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0524: |
| YGR252W | GCN5 | 16 | 5 | histone acetyltransferase |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| YCL010C | 2 | 0 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL010C (Class IV) |
| YBR081C | SPT7 | 13 | 5 | involved in alteration of transcription start site selection |
| YPL254W | HFI1 | 13 | 5 | transcriptional coactivator |
| YGL112C | TAF60 | 19 | 5 | TFIID and SAGA subunit |
| YDR448W | ADA2 | 21 | 5 | general transcriptional adaptor or co-activator |
| YHR099W | TRA1 | 15 | 5 | component of the Ada-Spt transcriptional regulatory complex |
| YMR223W | UBP8 | 1 | 0 | similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P (Class III) |
| Cluster | BI0525: |
| YDR510W | SMT3 | 22 | 0 | ubiquitin-like protein |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0526: |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| Cluster | BI0527: |
| YKL103C | LAP4 | 10 | 0 | aminopeptidase yscI precursor, vacuolar |
| YCL029C | BIK1 | 3 | 0 | nuclear fusion protein |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YGL156W | AMS1 | 2 | 0 | alpha-mannosidase |
| YBR010W | HHT1 | 3 | 0 | histone H3 |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| Cluster | BI0528: |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YLR129W | DIP2 | 0 | 0 | DOM34P-interacting protein |
| YOR061W | CKA2 | 4 | 1 | casein kinase II alpha' chain |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YLR409C | 1 | 1 | strong similarity to S. pombe beta-transducin (Class II) |
| YGL019W | CKB1 | 6 | 1 | casein kinase II, beta subunit |
| Cluster | BI0529: |
| YDR477W | SNF1 | 10 | 2 | carbon catabolite derepressing ser/thr protein kinase |
| YER027C | GAL83 | 3 | 2 | glucose repression protein |
| YGL115W | SNF4 | 10 | 2 | nuclear regulatory protein |
| YML006C | GIS4 | 2 | 0 | hypothetical protein (Class V) |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| Cluster | BI0530: |
| YGR092W | DBF2 | 7 | 1 | ser/thr protein kinase related to DBF20P |
| YJL005W | CYR1 | 1 | 0 | adenylate cyclase |
| YDR394W | RPT3 | 7 | 1 | 26S proteasome regulatory subunit |
| YIL106W | MOB1 | 9 | 1 | required for completion of mitosis and maintenance of ploidy |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YOR317W | FAA1 | 4 | 0 | long-chain-fatty-acid--CoA ligase |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YOR117W | RPT5 | 7 | 1 | 26S proteasome regulatory subunit |
| Cluster | BI0531: |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YIL033C | BCY1 | 6 | 1 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0532: |
| YER066C-A | 0 | 0 | hypothetical protein (Class V) |
| YER066C-A | 0 | 0 | hypothetical protein (Class V) |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YDL065C | PEX19 | 12 | 0 | required for biogenesis of peroxisomes - peroxin |
| Cluster | BI0533: |
| YOL133W | HRT1 | 4 | 0 | similarity to Lotus RING-finger protein (Class III) |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YJL047C | RTT101 | 3 | 0 | weak similarity to CDC53P (Class III) |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YLR289W | GUF1 | 0 | 0 | strong similarity to E. coli elongation factor-type GTP-binding protein lepa (Class II) |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| YLL034C | 0 | 0 | similarity to mammalian valosin (Class III) |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| Cluster | BI0534: |
| YML016C | PPZ1 | 2 | 0 | ser/thr phosphatase required for normal osmoregulation |
| YOR308C | SNU66 | 3 | 0 | component of U4/U6.U5 snRNP |
| Cluster | BI0535: |
| YMR022W | QRI8 | 2 | 0 | E2 ubiquitin-conjugation enzyme |
| 0 | 0 |
| YIL033C | BCY1 | 6 | 0 | cAMP dependent protein kinase, regulatory subunit |
| Cluster | BI0536: |
| YOR026W | BUB3 | 2 | 0 | cell cycle arrest protein |
| YLR258W | GSY2 | 5 | 0 | UDP-glucose--starch glucosyltransferase, isoform 2 |
| Q0092 | 0 | 0 | questionable ORF (Class VI) |
| Cluster | BI0537: |
| YDL179W | PCL9 | 3 | 0 | cyclin like protein interacting with PHO85P |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| Cluster | BI0538: |
| YDR386W | MUS81 | 4 | 0 | involved in the repair of UV and methylation induced DNA damage |
| YDL208W | NHP2 | 4 | 0 | nucleolar rRNA processing protein |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YHR143W-A | RPC10 | 2 | 0 | DNA-directed RNA polymerases I, II, III 7.7 KD subunit |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YFR001W | LOC1 | 0 | 0 | weak similarity to rabbit triadin SPP41P (Class III) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YPL153C | RAD53 | 2 | 0 | ser/thr/tyr protein kinase |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YMR001C | CDC5 | 3 | 0 | involved in regulation of DNA replication |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YFR001W | LOC1 | 0 | 0 | weak similarity to rabbit triadin SPP41P (Class III) |
| YPR181C | SEC23 | 9 | 0 | component of COPII coat of ER-golgi vesicles |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YBR098W | MMS4 | 0 | 0 | putative transcriptional (co)activator for DNA damage |
| YGR264C | MES1 | 1 | 0 | methionyl-tRNA synthetase |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YER078C | 4 | 0 | similarity to E.coli X-Pro aminopeptidase II (Class III) |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YKL022C | CDC16 | 10 | 0 | subunit of anaphase-promoting complex (cyclosome) |
| YPL127C | HHO1 | 0 | 0 | histone H1 protein |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| Cluster | BI0539: |
| YBR103W | SIF2 | 8 | 1 | SIR4P interacting protein |
| YCR033W | 1 | 0 | similarity to nuclear receptor co-repressor N-Cor (Class III) |
| YML109W | ZDS2 | 3 | 0 | multicopy suppressor of SIN4 |
| YMR155W | 1 | 0 | weak similarity to E.coli hypothetical protein f402 (Class IV) |
| YGR296W | YRF1-3 | 0 | 0 | strong similarity to YPL283C; YNL339C andother Y' encoded proteins (Class IV) |
| YIL112W | 1 | 1 | similarity to ankyrin and coiled-coil proteins (Class III) |
| YDL112W | TRM3 | 0 | 0 | tRNA (guanosine-2'-O-)-methyltransferase |
| YEL064C | 4 | 0 | similarity to YBL089W (Class III) |
| YCR033W | 1 | 0 | similarity to nuclear receptor co-repressor N-Cor (Class III) |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YLR409C | 1 | 0 | strong similarity to S. pombe beta-transducin (Class II) |
| Cluster | BI0540: |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YKL172W | EBP2 | 0 | 0 | required for pre-rRNA processing and ribosomal subunit assembly |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YOR310C | NOP58 | 3 | 0 | required for pre-18S rRNA processing |
| Cluster | BI0541: |
| YIR005W | IST3 | 3 | 1 | similarity to RNA-binding proteins (Class III) |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YGL174W | BUD13 | 1 | 1 | weak similarity to C.elegans hypothetical protein R08D7.1 (Class IV) |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YHR019C | DED81 | 2 | 0 | asparaginyl-tRNA-synthetase |
| YDR341C | JUNK | 1 | 0 | arginyl-tRNA synthetase, cytosolic |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| Cluster | BI0542: |
| YDR247W | 0 | 0 | strong similarity to SKS1P (Class II) |
| YDR247W | 0 | 0 | strong similarity to SKS1P (Class II) |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| YBR125C | PTC4 | 1 | 1 | serine/threonine protein phosphatases (PP2Cs) |
| YNL210W | MER1 | 2 | 0 | meiotic recombination protein |
| YBL066C | SEF1 | 2 | 0 | putative transcription factor |
| YBL061C | SKT5 | 2 | 0 | protoplast regeneration and killer toxin resistance protein |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YDR150W | NUM1 | 0 | 0 | nuclear migration protein |
| YDR416W | SYF1 | 10 | 0 | synthetic lethal with CDC40 |
| Cluster | BI0543: |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YHR165C | PRP8 | 1 | 0 | U5 snRNP protein, pre-mRNA splicing factor |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YKR028W | SAP190 | 3 | 1 | SIT4P-associated protein |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YLR386W | 11 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YPR191W | QCR2 | 6 | 2 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YDL047W | SIT4 | 4 | 2 | ser/thr protein phosphatase |
| YHR044C | DOG1 | 0 | 0 | 2-deoxyglucose-6-phosphate phosphatase |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| Cluster | BI0544: |
| YHR152W | SPO12 | 15 | 0 | sporulation protein |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| Cluster | BI0545: |
| YNL053W | MSG5 | 1 | 0 | dual-specifity protein phosphatase |
| YLR354C | TAL1 | 1 | 0 | transaldolase |
| YHR030C | SLT2 | 11 | 0 | ser/thr protein kinase of MAP kinase family |
| YBL016W | FUS3 | 11 | 0 | mitogen-activated protein kinase (MAP kinase) |
| Cluster | BI0546: |
| YNL113W | RPC19 | 7 | 3 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YPR010C | RPA135 | 5 | 3 | DNA-directed RNA polymerase I, 135 KD subunit |
| YJR063W | RPA12 | 18 | 1 | DNA-directed RNA polymerase I, 13.7 KD subunit |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YFR011C | JUNK | 2 | 1 | ochre suppressor tyr-tRNA |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| Cluster | BI0547: |
| YOR229W | WTM2 | 3 | 0 | transcriptional modulator |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| Cluster | BI0549: |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| Cluster | BI0550: |
| YGL213C | SKI8 | 5 | 0 | antiviral protein of the beta-transducin (WD-40) repeat family |
| YLR398C | SKI2 | 0 | 0 | antiviral protein and putative helicase |
| Cluster | BI0551: |
| YDR306C | 2 | 0 | weak similarity to S.pombe hypothetical protein SPAC6F6 (Class IV) |
| YDR306C | 2 | 0 | weak similarity to S.pombe hypothetical protein SPAC6F6 (Class IV) |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| Cluster | BI0552: |
| YML064C | TEM1 | 73 | 0 | GTP-binding protein of the RAS superfamily |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YER070W | RNR1 | 1 | 0 | ribonucleoside-diphosphate reductase, large subunit |
| YJR053W | BFA1 | 1 | 0 | spindle assembly checkpoint protein |
| YMR153W | NUP53 | 25 | 0 | component of the karyopherin docking complex of the nuclear pore complex |
| YJR053W | BFA1 | 1 | 0 | spindle assembly checkpoint protein |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YBR281C | 3 | 0 | similarity to hypothetical protein YFR044C (Class IV) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YDR293C | SSD1 | 0 | 0 | involved in the tolerance to high concentration of Ca2+ |
| Cluster | BI0553: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YJR065C | ARP3 | 6 | 1 | actin related protein |
| Cluster | BI0554: |
| YOL087C | 0 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YOL087C | 0 | 0 | similarity to S.pombe hypothetical protein (Class IV) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YDR429C | TIF35 | 6 | 1 | translation initiation factor eIF3 (p33 subunit) |
| YMR146C | TIF34 | 4 | 2 | translation initiation factor eIF3, p39 subunit |
| YGR267C | FOL2 | 4 | 0 | GTP cyclohydrolase I |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| YMR309C | NIP1 | 7 | 2 | associated with 40s ribosomal subunit |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YKL073W | LHS1 | 0 | 0 | chaperone of the ER lumen |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YBR079C | RPG1 | 2 | 1 | translation initiation factor eIF3 (p110 subunit) |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| Cluster | BI0555: |
| YDR460W | TFB3 | 1 | 0 | TFIIH subunit (transcription/repair factor) |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| Cluster | BI0556: |
| YNL323W | LEM3 | 1 | 0 | similarity to Ycx1p (Class IV) |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YLR326W | 2 | 0 | hypothetical protein (Class V) |
| YHR199C | 1 | 0 | strong similarity to hypothetical protein YHR198C (Class IV) |
| Cluster | BI0557: |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YCL011C | GBP2 | 2 | 0 | potential telomere-associated protein |
| YLL027W | ISA1 | 2 | 0 | mitochondrial protein required for normal iron metabolism |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YOR017W | PET127 | 2 | 0 | component of mitochondrial translation system |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YHR099W | TRA1 | 15 | 0 | component of the Ada-Spt transcriptional regulatory complex |
| YEL055C | POL5 | 0 | 0 | DNA polymerase V |
| YKR024C | DBP7 | 1 | 0 | RNA helicase required for 60S ribosomal subunit assembly |
| YKL014C | 0 | 0 | similarity to hypothetical protein SPCC14G10.02 S. pombe (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YDR174W | HMO1 | 9 | 0 | Non-histone protein |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YDR091C | RLI1 | 3 | 0 | strong similarity to human RNase L inhibitor and M.jannaschii ABC transporter protein (Class II) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YAR073W | IMD1 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| YJR041C | 0 | 0 | weak similarity to hypothetical protein SPAC2G11.02 S. pombe (Class IV) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YGR150C | 0 | 0 | similarity to PIR:T39838 hypothetical protein SPBC19G7.07c S. pombe (Class IV) |
| YOL139C | CDC33 | 5 | 1 | translation initiation factor eIF4E |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YHL038C | CBP2 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein 2 |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YGR198W | 0 | 0 | weak similarity to PIR:T38996 hypothetical protein SPAC637.04 S. pombe (Class IV) |
| YGR162W | TIF4631 | 6 | 1 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0558: |
| YOR212W | STE4 | 12 | 1 | GTP-binding protein beta subunit of the pheromone pathway |
| YHR005C | GPA1 | 3 | 1 | GTP-binding protein alpha subunit of the pheromone pathway |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| Cluster | BI0559: |
| YDR339C | 0 | 0 | weak similarity to hypothetical protein YOR004W (Class IV) |
| YDR339C | 0 | 0 | weak similarity to hypothetical protein YOR004W (Class IV) |
| YGL006W | PMC1 | 0 | 0 | Ca2+-transporting P-type ATPase |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| Cluster | BI0560: |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YIL063C | YRB2 | 4 | 0 | involved in nuclear protein export |
| Cluster | BI0561: |
| YPL256C | CLN2 | 3 | 1 | cyclin, G1/S-specific |
| YBR160W | CDC28 | 14 | 1 | cyclin-dependent protein kinase |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| Cluster | BI0562: |
| YJL141C | YAK1 | 2 | 0 | ser/thr protein kinase |
| 0 | 0 |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YPR184W | GDB1 | 1 | 0 | similarity to human 4-alpha-glucanotransferase (EC 2.4.1.25)/amylo-1,6-glucosidase (EC 3.2.1.33) (Class III) |
| YOR173W | 1 | 0 | strong similarity to YLR270W (Class IV) |
| YPL247C | 0 | 0 | similarity to human HAN11 protein and petunia an11 protein (Class III) |
| YGR184C | UBR1 | 1 | 0 | ubiquitin-protein ligase |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YCR093W | CDC39 | 4 | 0 | nuclear protein |
| YNL250W | RAD50 | 1 | 0 | DNA repair protein |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YLR241W | 3 | 0 | similarity to hypothetical S.pombe protein SPAC2G11.09 (Class IV) |
| YLR270W | 2 | 0 | strong similarity to YOR173W (Class IV) |
| Cluster | BI0563: |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YDR128W | 2 | 0 | weak similarity to SEC27P, YMR131C and human retinoblastoma-binding protein (Class III) |
| YER182W | 0 | 0 | similarity to hypothetical protein SPAC3A12.08 - S. pombe (Class IV) |
| YGL205W | POX1 | 0 | 0 | acyl-CoA oxidase |
| YFL016C | MDJ1 | 6 | 0 | heat shock protein - chaperone |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YEL062W | NPR2 | 2 | 0 | nitrogen permease regulator |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YPL258C | THI21 | 1 | 0 | similarity to B.subtilis transcriptional activator tenA, and strong similarity to hypothetical proteins YOL055C and YPR121W (Class III) |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| Cluster | BI0564: |
| YML032C | RAD52 | 5 | 0 | recombination and DNA repair protein |
| YER073W | ALD5 | 4 | 0 | aldehyde dehydrogenase (NAD+), mitochondrial |
| Cluster | BI0565: |
| YJR035W | RAD26 | 0 | 0 | DNA repair and recombination protein |
| YJL167W | ERG20 | 1 | 0 | farnesyl-pyrophosphate synthetase |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YNR058W | BIO3 | 3 | 0 | DAPA aminotransferase |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YPR191W | QCR2 | 6 | 0 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YIL053W | RHR2 | 3 | 0 | DL-glycerol phosphatase |
| YDR326C | 3 | 0 | strong similarity to YHR080C, similarity to YFL042C and YLR072W (Class IV) |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YBL015W | ACH1 | 0 | 0 | acetyl-CoA hydrolase |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| YHR076W | 0 | 0 | weak similarity to C.elegans hypothetical protein CEW09D10 (Class IV) |
| YMR318C | 0 | 0 | strong similarity to alcohol-dehydrogenase (Class II) |
| Cluster | BI0566: |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YDR037W | KRS1 | 0 | 0 | lysyl-tRNA synthetase, cytosolic |
| YGL026C | TRP5 | 1 | 0 | tryptophan synthase |
| YDR129C | SAC6 | 1 | 0 | actin filament bundling protein, fimbrin |
| Cluster | BI0567: |
| YDR388W | RVS167 | 9 | 1 | reduced viability upon starvation protein |
| YCR009C | RVS161 | 4 | 1 | similarity to human amphiphysin and RVS167P (Class III) |
| YDR148C | KGD2 | 11 | 0 | 2-oxoglutarate dehydrogenase complex E2 component |
| YOL058W | ARG1 | 1 | 0 | argininosuccinate synthetase |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YDR037W | KRS1 | 0 | 0 | lysyl-tRNA synthetase, cytosolic |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YGL026C | TRP5 | 1 | 0 | tryptophan synthase |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YER003C | PMI40 | 0 | 0 | mannose-6-phosphate isomerase |
| Cluster | BI0568: |
| YDL156W | 2 | 0 | weak similarity to Pas7p (Class III) |
| YDL156W | 2 | 0 | weak similarity to Pas7p (Class III) |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| Cluster | BI0569: |
| YLR288C | MEC3 | 82 | 1 | G2-specific checkpoint protein |
| YOR368W | RAD17 | 3 | 1 | DNA damage checkpoint control protein |
| Cluster | BI0570: |
| YDL175C | 2 | 0 | weak similarity to cellular nucleic acid binding proteins (Class III) |
| YDL175C | 2 | 0 | weak similarity to cellular nucleic acid binding proteins (Class III) |
| YOR204W | DED1 | 1 | 0 | ATP-dependent RNA helicase |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| YGR165W | 3 | 0 | similarity to PIR:T39444 hypothetical protein SPBC14C8.16c S. pombe (Class IV) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| Cluster | BI0571: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YKL172W | EBP2 | 0 | 0 | required for pre-rRNA processing and ribosomal subunit assembly |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YOR017W | PET127 | 2 | 0 | component of mitochondrial translation system |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YER077C | 2 | 0 | hypothetical protein (Class V) |
| YLR136C | TIS11 | 2 | 0 | tRNA-specific adenosine deaminase 3 |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| Cluster | BI0572: |
| YOR061W | CKA2 | 4 | 1 | casein kinase II alpha' chain |
| YIL035C | CKA1 | 4 | 1 | casein kinase II, catalytic alpha chain |
| Cluster | BI0573: |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YHR074W | QNS1 | 1 | 0 | weak similarity to B.subtilis spore outgrowth factor B (Class III) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YOR154W | 2 | 0 | similarity to hypothetical A. thaliana proteins F19G10.15 and T19F06.21 (Class IV) |
| YOR220W | 3 | 0 | hypothetical protein (Class V) |
| Cluster | BI0574: |
| YOL102C | TPT1 | 1 | 0 | tRNA 2'-phosphotransferase |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| Cluster | BI0575: |
| YMR139W | RIM11 | 6 | 0 | ser/thr protein kinase |
| YOL061W | PRS5 | 5 | 1 | ribose-phosphate pyrophosphokinases |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| YKR048C | NAP1 | 9 | 1 | nucleosome assembly protein I |
| YDR507C | GIN4 | 6 | 1 | ser/thr protein kinase |
| YBR140C | IRA1 | 0 | 0 | inhibitory regulator protein of the ras-cyclic AMP pathway |
| YNL199C | GCR2 | 3 | 0 | glycolytic genes transcriptional activator |
| YER138C | 0 | 0 |
| YLR310C | CDC25 | 8 | 0 | GDP/GTP exchange factor for RAS1P and RAS2P |
| YLR133W | CKI1 | 1 | 0 | choline kinase |
| YHL011C | PRS3 | 3 | 0 | ribose-phosphate pyrophosphokinase |
| YER160C | 0 | 0 |
| YJR027W | 0 | 0 |
| YJR028W | 0 | 0 |
| YBR126C | TPS1 | 3 | 1 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YER132C | PMD1 | 1 | 0 | negative regulator of early meiotic expression |
| YER099C | PRS2 | 3 | 1 | ribose-phosphate pyrophosphokinase |
| YOL081W | IRA2 | 1 | 0 | GTPase-activating protein for RAS proteins |
| YDR170W-A | 0 | 0 |
| YER052C | HOM3 | 6 | 0 | L-aspartate 4-P-transferase |
| YML100W | TSL1 | 3 | 1 | alpha,alpha-trehalose-phosphate synthase, 123 KD subunit |
| Cluster | BI0576: |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YFR003C | 3 | 0 | strong similarity to hypothetical protein SPAC6B12.13 - S.pombe (Class IV) |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YLR258W | GSY2 | 5 | 1 | UDP-glucose--starch glucosyltransferase, isoform 2 |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| YLR449W | FPR4 | 4 | 0 | nucleolar peptidylprolyl cis-trans isomerase (PPIase) |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YFR015C | GSY1 | 6 | 1 | UDP glucose--starch glucosyltransferase, isoform 1 |
| Cluster | BI0577: |
| YPL170W | 1 | 0 | similarity to C.elegans LIM homeobox protein (Class III) |
| YPL170W | 1 | 0 | similarity to C.elegans LIM homeobox protein (Class III) |
| YLR289W | GUF1 | 0 | 0 | strong similarity to E. coli elongation factor-type GTP-binding protein lepa (Class II) |
| YGL008C | PMA1 | 0 | 0 | H+-transporting P-type ATPase, major isoform, plasma membrane |
| Cluster | BI0578: |
| YBL026W | LSM2 | 15 | 1 | Sm-like (Lsm) protein |
| YJL124C | LSM1 | 10 | 1 | Sm-like (Lsm) protein |
| Cluster | BI0579: |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YPR010C | RPA135 | 5 | 2 | DNA-directed RNA polymerase I, 135 KD subunit |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YNL113W | RPC19 | 7 | 2 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YDL137W | ARF2 | 0 | 0 | GTP-binding protein of the ARF family |
| Cluster | BI0580: |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YLR215C | CDC123 | 5 | 0 | strong similarity to rat cell cycle progression related D123 protein (Class II) |
| Cluster | BI0581: |
| YBL026W | LSM2 | 15 | 5 | Sm-like (Lsm) protein |
| YNL147W | LSM7 | 10 | 4 | Sm-like (Lsm) protein |
| YER112W | LSM4 | 14 | 4 | Sm-like (Lsm) protein |
| YDL160C | DHH1 | 13 | 2 | putative RNA helicase of the DEAD box family |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YJR022W | LSM8 | 28 | 4 | splicing factor |
| YCR077C | PAT1 | 20 | 5 | topoisomerase II-associated protein |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| Cluster | BI0582: |
| YHR014W | SPO13 | 1 | 0 | meiosis-specific protein |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| Cluster | BI0583: |
| YLR293C | GSP1 | 12 | 1 | GTP-binding protein of the ras superfamily |
| YER052C | HOM3 | 6 | 0 | L-aspartate 4-P-transferase |
| YGL097W | SRM1 | 4 | 0 | GDP/GTP exchange factor for GSP1P/GSP2P |
| YMR235C | RNA1 | 2 | 0 | GTPase activating protein |
| YJR074W | MOG1 | 2 | 2 | GSP1-interacting protein |
| YOR185C | GSP2 | 2 | 1 | GTP-binding protein of the RAS superfamily |
| Cluster | BI0584: |
| YBR125C | PTC4 | 1 | 1 | serine/threonine protein phosphatases (PP2Cs) |
| YDR247W | 0 | 0 | strong similarity to SKS1P (Class II) |
| YDR507C | GIN4 | 6 | 0 | ser/thr protein kinase |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| Cluster | BI0585: |
| YBR203W | 1 | 0 | hypothetical protein (Class V) |
| YBR203W | 1 | 0 | hypothetical protein (Class V) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| Cluster | BI0586: |
| YDL013W | HEX3 | 6 | 0 | hexose metabolism-related protein |
| YLR006C | SSK1 | 4 | 0 | two-component signal transducer |
| Cluster | BI0587: |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | BI0588: |
| YJR053W | BFA1 | 1 | 0 | spindle assembly checkpoint protein |
| YGL121C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0589: |
| YDR419W | RAD30 | 0 | 0 | DNA repair protein |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| Cluster | BI0590: |
| YIR005W | IST3 | 3 | 1 | similarity to RNA-binding proteins (Class III) |
| YGL174W | BUD13 | 1 | 1 | weak similarity to C.elegans hypothetical protein R08D7.1 (Class IV) |
| Cluster | BI0591: |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YBR149W | ARA1 | 2 | 0 | D-arabinose dehydrogenase, large subunit |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YHR208W | BAT1 | 0 | 0 | branched chain amino acid aminotransferase, mitochondrial |
| YDR353W | TRR1 | 4 | 0 | thioredoxin reductase (NADPH) |
| YGR061C | ADE6 | 1 | 0 | 5'-phosphoribosylformyl glycinamidine synthetase |
| YKL157W | APE2 | 4 | 0 | aminopeptidase yscII |
| YDR037W | KRS1 | 0 | 0 | lysyl-tRNA synthetase, cytosolic |
| YDR158W | HOM2 | 1 | 0 | aspartate-semialdehyde dehydrogenase |
| YPL004C | 4 | 0 | strong similarity to YGR086C (Class IV) |
| YLL018C | DPS1 | 2 | 0 | aspartyl-tRNA synthetase, cytosolic |
| YOR335C | ALA1 | 0 | 0 | alanyl-tRNA synthetase, cytosolic |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YPL028W | ERG10 | 0 | 0 | acetyl-CoA C-acetyltransferase, cytosolic |
| YHR019C | DED81 | 2 | 0 | asparaginyl-tRNA-synthetase |
| YJL167W | ERG20 | 1 | 0 | farnesyl-pyrophosphate synthetase |
| YDL124W | 0 | 0 | similarity to aldose reductases (Class III) |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YLR153C | ACS2 | 2 | 0 | acetyl-coenzyme A synthetase |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YBR121C | GRS1 | 0 | 0 | glycine--tRNA ligase |
| YAL012W | CYS3 | 2 | 0 | cystathionine gamma-lyase |
| YCR002C | CDC10 | 6 | 0 | cell division control protein |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YDL078C | MDH3 | 0 | 0 | malate dehydrogenase, peroxisomal |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YGR204W | ADE3 | 1 | 0 | C1-tetrahydrofolate synthase (trifunctional enzyme),cytoplasmic |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YER165W | PAB1 | 15 | 0 | mRNA polyadenylate-binding protein |
| YDR129C | SAC6 | 1 | 0 | actin filament bundling protein, fimbrin |
| YER003C | PMI40 | 0 | 0 | mannose-6-phosphate isomerase |
| YCR053W | THR4 | 0 | 0 | threonine synthase (o-p-homoserine p-lyase) |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YJR105W | ADO1 | 1 | 0 | strong similarity to human adenosine kinase (Class II) |
| YOR120W | GCY1 | 0 | 0 | galactose-induced protein of aldo/keto reductase family |
| Cluster | BI0593: |
| YPL149W | APG5 | 4 | 0 | involved in autophagy and nutrient starvation |
| YJL167W | ERG20 | 1 | 0 | farnesyl-pyrophosphate synthetase |
| YAL012W | CYS3 | 2 | 0 | cystathionine gamma-lyase |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| Cluster | BI0594: |
| YDR488C | PAC11 | 2 | 0 | required in the absence of CIN8P |
| YBL064C | 0 | 0 | strong similarity to thiol-specific antioxidant enzyme (Class II) |
| YOR172W | 1 | 0 | similarity to finger protein YKL222C, YOR162C and YLR266C (Class IV) |
| YNR058W | BIO3 | 3 | 0 | DAPA aminotransferase |
| Cluster | BI0595: |
| YMR001C | CDC5 | 3 | 0 | involved in regulation of DNA replication |
| YIL026C | IRR1 | 3 | 2 | essential protein |
| YFL008W | SMC1 | 6 | 2 | chromosome segregation protein |
| YJL074C | SMC3 | 3 | 2 | required for structural maintenance of chromosomes |
| Cluster | BI0596: |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YBR286W | APE3 | 2 | 0 | vacuolar aminopeptidase Y |
| Cluster | BI0597: |
| YGL003C | CDH1 | 0 | 0 | substrate-specific activator of APC-dependent proteolysis |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YBR160W | CDC28 | 14 | 0 | cyclin-dependent protein kinase |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| Cluster | BI0598: |
| YGL003C | CDH1 | 0 | 0 | substrate-specific activator of APC-dependent proteolysis |
| YBR160W | CDC28 | 14 | 1 | cyclin-dependent protein kinase |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YKR048C | NAP1 | 9 | 1 | nucleosome assembly protein I |
| YPR119W | CLB2 | 12 | 2 | cyclin, G2/M-specific |
| Cluster | BI0599: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YFR001W | LOC1 | 0 | 0 | weak similarity to rabbit triadin SPP41P (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | BI0600: |
| YER179W | DMC1 | 15 | 1 | meiosis-specific protein |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| YNR016C | ACC1 | 2 | 1 | acetyl-CoA carboxylase |
| YPR183W | DPM1 | 3 | 0 | dolichyl-phosphate beta-D-mannosyltransferase |
| YFL016C | MDJ1 | 6 | 0 | heat shock protein - chaperone |
| Cluster | BI0601: |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| 0 | 0 |
| YDR422C | SIP1 | 7 | 0 | multicopy suppressor of SNF1 |
| YPL031C | PHO85 | 14 | 0 | cyclin-dependent protein kinase |
| YML064C | TEM1 | 73 | 1 | GTP-binding protein of the RAS superfamily |
| YDL160C | DHH1 | 13 | 0 | putative RNA helicase of the DEAD box family |
| YAL035W | FUN12 | 2 | 0 | general translation factor eIF2 homolog |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YKR051W | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YDR216W | ADR1 | 3 | 0 | zinc-finger transcription factor |
| YPL140C | MKK2 | 5 | 0 | protein kinase of the map kinase kinase (MEK) family |
| YBR018C | GAL7 | 1 | 0 | UDP-glucose--hexose-1-phosphate uridylyltransferase |
| YHR065C | RRP3 | 1 | 0 | required for maturation of the 35S primary transcript |
| YDL052C | SLC1 | 1 | 0 | fatty acyltransferase |
| YPR088C | SRP54 | 2 | 0 | signal recognition particle subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YPR167C | MET16 | 0 | 0 | 3'-phosphoadenylylsulfate reductase |
| YMR108W | ILV2 | 0 | 0 | acetolactate synthase |
| YLL048C | YBT1 | 0 | 0 | yeast bile transporter |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YGR266W | 0 | 0 | hypothetical protein (Class V) |
| YNR053C | 6 | 0 | strong similarity to human breast tumor associated autoantigen (Class II) |
| YJL117W | PHO86 | 4 | 0 | inorganic phospate transporter |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YML020W | 0 | 0 | hypothetical protein (Class V) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YNL006W | LST8 | 1 | 0 | required for transport of permeases from the golgi to the plasma membrane |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YLL013C | PUF3 | 2 | 0 | transcript-specific regulator of mRNA degradation |
| YKL054C | VID31 | 0 | 0 | similarity to glutenin, high molecular weight chain proteins and SNF5P (Class III) |
| YGR267C | FOL2 | 4 | 1 | GTP cyclohydrolase I |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| YPR003C | 1 | 0 | similarity to sulphate transporter proteins (Class III) |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YOL078W | 0 | 0 | similarity to stress activated MAP kinase interacting protein S. pombe (Class III) |
| YOR110W | TFC7 | 5 | 0 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| YLR271W | 0 | 0 | weak similarity to hypothetical protein T04H1.5 C. elegans (Class IV) |
| YOR142W | LSC1 | 0 | 0 | succinate-CoA ligase alpha subunit |
| YNL007C | SIS1 | 1 | 0 | heat shock protein |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YER077C | 2 | 0 | hypothetical protein (Class V) |
| YGR193C | PDX1 | 1 | 0 | pyruvate dehydrogenase complex protein X |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YBR228W | SLX1 | 2 | 0 | similarity to hypothetical A.thaliana protein (Class IV) |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| Cluster | BI0602: |
| YER020W | GPA2 | 2 | 0 | guanine nucleotide-binding regulatory protein |
| YHR005C | GPA1 | 3 | 0 | GTP-binding protein alpha subunit of the pheromone pathway |
| Cluster | BI0603: |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| Cluster | BI0604: |
| YKL103C | LAP4 | 10 | 1 | aminopeptidase yscI precursor, vacuolar |
| YEL071W | DLD3 | 0 | 0 | D-lactate dehydrogenase |
| YOL082W | CVT19 | 18 | 1 | similarity to YOL083W (Class IV) |
| Cluster | BI0605: |
| YLR247C | 0 | 0 | similarity to S.pombe rad8 protein and RDH54P (Class III) |
| YLR247C | 0 | 0 | similarity to S.pombe rad8 protein and RDH54P (Class III) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YJL085W | EXO70 | 0 | 0 | 70 kDa exocyst component protein |
| YOR028C | CIN5 | 9 | 0 | transcriptional activator |
| Cluster | BI0606: |
| YOR181W | LAS17 | 6 | 3 | component of actin cortical patches |
| YIR012W | SQT1 | 2 | 0 | suppresses dominant-negative mutants of the ribosomal protein QSR1 |
| YBR085W | AAC3 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDR388W | RVS167 | 9 | 1 | reduced viability upon starvation protein |
| YBL007C | SLA1 | 2 | 1 | cytoskeleton assembly control protein |
| YML123C | PHO84 | 1 | 0 | high-affinity inorganic phosphate/H+ symporter |
| YLR447C | VMA6 | 88 | 0 | H+-ATPase V0 domain 36 KD subunit, vacuolar |
| YLR337C | VRP1 | 1 | 1 | verprolin |
| YNR065C | 1 | 0 | strong similarity to YJL222W, YIL173W and PEP1P (Class II) |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YHR114W | BZZ1 | 91 | 0 | similarity to S.pombe hypothetical protein and human protein-tyrosine kinase fer (Class III) |
| YBL017C | PEP1 | 0 | 0 | vacuolar protein sorting/targeting protein |
| YDR388W | RVS167 | 9 | 1 | reduced viability upon starvation protein |
| YBL017C | PEP1 | 0 | 0 | vacuolar protein sorting/targeting protein |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YBL017C | PEP1 | 0 | 0 | vacuolar protein sorting/targeting protein |
| YBL007C | SLA1 | 2 | 1 | cytoskeleton assembly control protein |
| YLR081W | GAL2 | 2 | 0 | galactose (and glucose) permease |
| YMR241W | YHM2 | 0 | 0 | yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YBL017C | PEP1 | 0 | 0 | vacuolar protein sorting/targeting protein |
| YHR114W | BZZ1 | 91 | 0 | similarity to S.pombe hypothetical protein and human protein-tyrosine kinase fer (Class III) |
| Cluster | BI0607: |
| YLR148W | PEP3 | 3 | 0 | vacuolar membrane protein |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| Cluster | BI0608: |
| YGR258C | RAD2 | 0 | 0 | structure-specific nuclease of the nucleotide excision repairosome |
| YOL044W | PEX15 | 2 | 0 | required for peroxisome assembly - peroxin |
| Cluster | BI0609: |
| YNL157W | 4 | 0 | weak similarity to S.pombe hypothetical protein SPAC10F6 (Class IV) |
| YNL157W | 4 | 0 | weak similarity to S.pombe hypothetical protein SPAC10F6 (Class IV) |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| Cluster | BI0610: |
| YIL063C | YRB2 | 4 | 0 | involved in nuclear protein export |
| 0 | 0 |
| YHR011W | DIA4 | 1 | 0 | strong similarity to seryl-tRNA synthetases (Class II) |
| YOL061W | PRS5 | 5 | 0 | ribose-phosphate pyrophosphokinases |
| Cluster | BI0611: |
| YPL139C | UME1 | 1 | 0 | negative regulator of meiosis |
| YOL004W | SIN3 | 8 | 1 | transcription regulatory protein |
| YPL181W | 0 | 0 | weak similarity to YKR029C (Class IV) |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| Cluster | BI0612: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YJR065C | ARP3 | 6 | 2 | actin related protein |
| Cluster | BI0613: |
| YGL115W | SNF4 | 10 | 1 | nuclear regulatory protein |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YOR018W | ROD1 | 1 | 0 | O-dinitrobenzene,calcium and zinc resistance protein |
| YDR422C | SIP1 | 7 | 1 | multicopy suppressor of SNF1 |
| YOR267C | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| Cluster | BI0614: |
| YDL200C | MGT1 | 0 | 0 | O6-methylguanine DNA repair methyltransferase |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YEL024W | RIP1 | 2 | 0 | ubiquinol--cytochrome-c reductase iron-sulfur protein precursor |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YGL121C | 0 | 0 | hypothetical protein (Class V) |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YGR184C | UBR1 | 1 | 0 | ubiquitin-protein ligase |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YDL192W | ARF1 | 1 | 0 | small GTP-binding protein of the ARF family |
| YBR010W | HHT1 | 3 | 0 | histone H3 |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YKL073W | LHS1 | 0 | 0 | chaperone of the ER lumen |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| Cluster | BI0615: |
| YFR003C | 3 | 0 | strong similarity to hypothetical protein SPAC6B12.13 - S.pombe (Class IV) |
| YFR003C | 3 | 0 | strong similarity to hypothetical protein SPAC6B12.13 - S.pombe (Class IV) |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| Cluster | BI0616: |
| YDR369C | XRS2 | 1 | 0 | DNA repair protein |
| YBR063C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | BI0617: |
| YLR186W | EMG1 | 0 | 0 | strong similarity to S.pombe hypothetical protein C18G6.07C (Class IV) |
| YER030W | 0 | 0 | similarity to mouse nucleolin (Class III) |
| Cluster | BI0618: |
| YBR082C | UBC4 | 0 | 0 | E2 ubiquitin-conjugating enzyme |
| YKL010C | UFD4 | 1 | 0 | similarity to rat ubiquitin ligase Nedd4 (Class III) |
| YDR529C | QCR7 | 2 | 0 | ubiquinol--cytochrome-c reductase subunit 7 |
| Cluster | BI0619: |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YPL031C | PHO85 | 14 | 0 | cyclin-dependent protein kinase |
| YDR436W | PPZ2 | 0 | 0 | protein ser/thr phosphatase of the PP-1 family |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| Cluster | BI0620: |
| YBR017C | KAP104 | 10 | 1 | beta-karyopherin |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YGL122C | NAB2 | 8 | 1 | nuclear poly(A)-binding protein |
| Cluster | BI0621: |
| YJR110W | 2 | 0 | similarity to human myotubularin (Class III) |
| YJR110W | 2 | 0 | similarity to human myotubularin (Class III) |
| YLR071C | RGR1 | 2 | 0 | DNA-directed RNA polymerase II holoenzyme subunit |
| Cluster | BI0622: |
| YER133W | GLC7 | 17 | 4 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YDR130C | FIN1 | 1 | 1 | weak similarity to sea urchin myosin heavy chain |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YDR412W | 2 | 1 | questionable ORF (Class VI) |
| YMR311C | GLC8 | 0 | 0 | regulatory subunit for protein ser/thr phosphatase GLC7P |
| YDR301W | CFT1 | 7 | 1 | pre-mRNA 3'-end processing factor CF II |
| YOR329C | SCD5 | 5 | 1 | suppressor of clathrin deficiency |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YOR227W | 0 | 0 | similarity to microtubule-interacting protein MHP1P (Class III) |
| YJL042W | MHP1 | 2 | 1 | microtubule-associated protein |
| YLR430W | SEN1 | 1 | 0 | positive effector of tRNA-splicing endonuclease |
| YCL054W | SPB1 | 3 | 0 | required for ribosome synthesis, putative methylase |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YJR093C | FIP1 | 10 | 1 | component of pre-mRNA polyadenylation factor PF I |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YLR449W | FPR4 | 4 | 0 | nucleolar peptidylprolyl cis-trans isomerase (PPIase) |
| YHR158C | KEL1 | 5 | 0 | involved in cell fusion and morphology |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| Cluster | BI0623: |
| YGL158W | RCK1 | 1 | 1 | ser/thr protein kinase |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YOR018W | ROD1 | 1 | 0 | O-dinitrobenzene,calcium and zinc resistance protein |
| YDR477W | SNF1 | 10 | 0 | carbon catabolite derepressing ser/thr protein kinase |
| YBL016W | FUS3 | 11 | 0 | mitogen-activated protein kinase (MAP kinase) |
| YLR113W | HOG1 | 5 | 1 | ser/thr protein kinase of MAP kinase (MAPK) family |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0624: |
| YCR014C | POL4 | 2 | 0 | DNA polymerase |
| YNL180C | RHO5 | 1 | 0 | similarity to S.pombe CDC42P and other GTP-binding proteins (Class III) |
| Cluster | BI0625: |
| YDR030C | RAD28 | 1 | 0 | protein involved in the same pathway as RAD26P, has beta-transducin (WD-40) repeats |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| Cluster | BI0626: |
| YLR074C | BUD20 | 1 | 0 | weak similarity to human zinc finger protein (Class III) |
| YDR036C | 0 | 0 | similarity to enoyl CoA hydratase (Class III) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YDR174W | HMO1 | 9 | 0 | Non-histone protein |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YPL013C | 3 | 0 | strong similarity to N.crassa mitochondrial ribosomal protein S24 (Class II) |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YBL026W | LSM2 | 15 | 0 | Sm-like (Lsm) protein |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YFL006W | 0 | 0 | similarity to hypothetical protein TRCDSEMBL:AB024034_15 A. thaliana (Class IV) |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YIR003W | 1 | 0 | weak similarity to mammalian neurofilament triplet H proteins (Class III) |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YNL038W | GPI15 | 0 | 0 | sequence and functional homologue of human Pig-H protein |
| YLR009W | 2 | 0 | similarity to ribosomal protein L24.e.B (Class III) |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| Cluster | BI0627: |
| YJR062C | NTA1 | 0 | 0 | amino-terminal amidase |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| Cluster | BI0628: |
| YDR267C | 2 | 0 | weak similarity to human TAFII100 and other WD-40 repeat containing proteins (Class III) |
| YDR267C | 2 | 0 | weak similarity to human TAFII100 and other WD-40 repeat containing proteins (Class III) |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YOL111C | 4 | 0 | weak similarity to human ubiquitin-like protein GDX (Class III) |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YHR044C | DOG1 | 0 | 0 | 2-deoxyglucose-6-phosphate phosphatase |
| YER098W | UBP9 | 0 | 0 | ubiquitin carboxyl-terminal hydrolase |
| Cluster | BI0629: |
| YDL017W | CDC7 | 13 | 0 | protein kinase |
| YJR089W | BIR1 | 3 | 0 | member of the inhibitor of apoptosis family, participate in chromosome segregation events |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YGL151W | NUT1 | 0 | 0 | negative transcription regulator from artifical reporters |
| YGR087C | PDC6 | 1 | 0 | pyruvate decarboxylase 3 |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YLL039C | UBI4 | 2 | 0 | ubiquitin |
| YLR231C | 0 | 0 | strong similarity to rat kynureninase (Class II) |
| YDR299W | BFR2 | 2 | 0 | involved in protein transport steps at the Brefeldin A blocks |
| YLR331C | 1 | 0 | questionable ORF (Class VI) |
| YLR386W | 11 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YLR134W | PDC5 | 5 | 0 | pyruvate decarboxylase, isozyme 2 |
| YNL113W | RPC19 | 7 | 0 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YDL080C | THI3 | 0 | 0 | positive regulation factor of thiamin metabolism |
| YPL218W | SAR1 | 4 | 0 | GTP-binding protein of the ARF family |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| Cluster | BI0630: |
| YDR306C | 2 | 0 | weak similarity to S.pombe hypothetical protein SPAC6F6 (Class IV) |
| YDR306C | 2 | 0 | weak similarity to S.pombe hypothetical protein SPAC6F6 (Class IV) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| Cluster | BI0631: |
| YNL093W | YPT53 | 1 | 0 | GTP-binding protein of the RAB family (RAS superfamily) |
| 0 | 0 |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YNL227C | 2 | 0 | similarity to dnaJ-like proteins (Class III) |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| YKR014C | YPT52 | 4 | 0 | GTP-binding protein of the rab family |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| Cluster | BI0632: |
| YHR115C | 5 | 0 | strong similarity to hypothetical protein YNL116W (Class IV) |
| YHR115C | 5 | 0 | strong similarity to hypothetical protein YNL116W (Class IV) |
| YNL311C | 3 | 0 | hypothetical protein (Class V) |
| Cluster | BI0633: |
| YMR094W | CTF13 | 4 | 1 | kinetochore protein complex, CBF3, 58 KD subunit |
| YDR328C | SKP1 | 17 | 1 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0634: |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YJR065C | ARP3 | 6 | 3 | actin related protein |
| YKL013C | ARC19 | 3 | 1 | subunit of the ARP2/3 complex |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| Cluster | BI0635: |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YMR229C | RRP5 | 0 | 0 | processing of pre-ribosomal RNA |
| Cluster | BI0636: |
| YBR109C | CMD1 | 8 | 4 | calmodulin |
| YLL040C | VPS13 | 0 | 0 | involved in regulating membrane traffic |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YKL067W | YNK1 | 3 | 0 | nucleoside diphosphate kinase |
| YOR326W | MYO2 | 2 | 1 | myosin heavy chain |
| YNL281W | HCH1 | 5 | 0 | strong similarity to YDR214W (Class IV) |
| YMR109W | MYO5 | 1 | 1 | myosin I |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YBR130C | SHE3 | 2 | 0 | required for mother cell-specific expression of HO |
| YLL050C | COF1 | 3 | 0 | cofilin, actin binding and severing protein |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YML057W | CMP2 | 2 | 1 | calcineurin B, catalytic subunit |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YOL016C | CMK2 | 4 | 1 | Ca2+/calmodulin-dependent ser/thr protein kinase, type II |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| Cluster | BI0637: |
| YNL250W | RAD50 | 1 | 0 | DNA repair protein |
| YCR073C | SSK22 | 2 | 0 | MAP kinase kinase kinase |
| Cluster | BI0638: |
| YDL116W | NUP84 | 19 | 1 | nuclear pore protein |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YGL092W | NUP145 | 10 | 1 | nuclear pore protein |
| Cluster | BI0639: |
| YPL139C | UME1 | 1 | 0 | negative regulator of meiosis |
| YOL004W | SIN3 | 8 | 1 | transcription regulatory protein |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| Cluster | BI0640: |
| YIL066C | RNR3 | 1 | 0 | ribonucleotide reductase, repair inducible large subunit |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YER070W | RNR1 | 1 | 0 | ribonucleoside-diphosphate reductase, large subunit |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YNL134C | 1 | 0 | similarity to C.carbonum toxD gene (Class III) |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| Cluster | BI0641: |
| YLR262C | YPT6 | 1 | 0 | GTP-binding protein of the rab family |
| 0 | 0 |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YMR235C | RNA1 | 2 | 0 | GTPase activating protein |
| YLR039C | RIC1 | 0 | 0 | involved in transcription of ribosomal proteins and ribosomal RNA |
| Cluster | BI0642: |
| YDR142C | PEX7 | 7 | 0 | peroxisomal import protein - peroxin |
| YKL103C | LAP4 | 10 | 0 | aminopeptidase yscI precursor, vacuolar |
| YIL068C | SEC6 | 1 | 0 | protein transport protein |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YLR105C | SEN2 | 6 | 0 | tRNA splicing endonuclease beta subunit |
| Cluster | BI0643: |
| YKR026C | GCN3 | 15 | 0 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YAL002W | VPS8 | 0 | 0 | vacuolar sorting protein, 134 kD |
| YGL026C | TRP5 | 1 | 0 | tryptophan synthase |
| YFL022C | FRS2 | 2 | 0 | phenylalanine--tRNA ligase beta chain, cytosolic |
| YBL030C | PET9 | 0 | 0 | ADP/ATP carrier protein (MCF) |
| YJR072C | 3 | 0 | strong similarity to C.elegans hypothetical protein and similarity to YLR243W (Class IV) |
| YBR120C | CBP6 | 1 | 0 | apo-cytochrome B pre-mRNA processing protein |
| YMR145C | NDH1 | 0 | 0 | mitochondrial cytosolically directed NADH dehydrogenase |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YDL052C | SLC1 | 1 | 0 | fatty acyltransferase |
| YGR282C | BGL2 | 0 | 0 | endo-beta-1,3-glucanase of the cell wall |
| YBR227C | MCX1 | 0 | 0 | similarity to E.coli ATP-binding protein clpX (Class III) |
| YKR046C | 0 | 0 | hypothetical protein (Class V) |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| Cluster | BI0644: |
| YLR208W | SEC13 | 5 | 1 | protein transport protein |
| YDL195W | SEC31 | 4 | 1 | component of the COPII coat of ER-golgi vesicles |
| YHL039W | 0 | 0 | weak similarity to YPL208W (Class IV) |
| YKR082W | NUP133 | 1 | 0 | nuclear pore protein |
| YDL195W | SEC31 | 4 | 1 | component of the COPII coat of ER-golgi vesicles |
| Cluster | BI0645: |
| YDR490C | PKH1 | 6 | 2 | ser/thr protein kinases |
| YPL004C | 4 | 1 | strong similarity to YGR086C (Class IV) |
| YGR086C | 3 | 1 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YKL166C | TPK3 | 1 | 0 | cAMP-dependent protein kinase 3, catalytic chain |
| Cluster | BI0646: |
| YBR267W | 0 | 0 | similarity to hypothetical protein YLR387C (Class IV) |
| YBR267W | 0 | 0 | similarity to hypothetical protein YLR387C (Class IV) |
| YJL122W | 0 | 0 | weak similarity to dog-fish transition protein S2 (Class III) |
| Cluster | BI0647: |
| YLR263W | RED1 | 5 | 0 | meiosis-specific protein |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| Cluster | BI0648: |
| YBR198C | TAF90 | 16 | 0 | TFIID and SAGA subunit |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YOR308C | SNU66 | 3 | 0 | component of U4/U6.U5 snRNP |
| Cluster | BI0649: |
| YOL126C | MDH2 | 1 | 0 | malate dehydrogenase, cytoplasmic |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YMR246W | FAA4 | 2 | 0 | long-chain-fatty-acid--CoA ligase |
| YLR300W | EXG1 | 0 | 0 | exo-beta-1,3-glucanase (I/II), major isoform |
| YIL108W | 2 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YJR068W | RFC2 | 2 | 0 | DNA replication factor C, 41 KD subunit |
| Cluster | BI0650: |
| YOR174W | MED4 | 11 | 0 | transcription regulation mediator |
| YNR039C | ZRG17 | 1 | 0 | weak similarity to Anopheles mitochondrial NADH dehydrogenase subunit 2 (Class III) |
| Cluster | BI0651: |
| YMR137C | PSO2 | 0 | 0 | DNA repair protein |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YHR076W | 0 | 0 | weak similarity to C.elegans hypothetical protein CEW09D10 (Class IV) |
| Cluster | BI0652: |
| YLR016C | 2 | 0 | weak similarity to TRCDSEMBLNEW:AK022615_1 unnamed ORF; Homo sapiens (Class IV) |
| YLR016C | 2 | 0 | weak similarity to TRCDSEMBLNEW:AK022615_1 unnamed ORF; Homo sapiens (Class IV) |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YLR086W | SMC4 | 0 | 0 | Stable Maintenance of Chromosomes |
| YGL174W | BUD13 | 1 | 0 | weak similarity to C.elegans hypothetical protein R08D7.1 (Class IV) |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| Cluster | BI0653: |
| YIL079C | 1 | 1 | strong similarity to hypothetical protein YDL175C (Class IV) |
| YIL079C | 1 | 1 | strong similarity to hypothetical protein YDL175C (Class IV) |
| YOL115W | TRF4 | 6 | 1 | topoisomerase I-related protein |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YNL004W | HRB1 | 3 | 0 | strong similarity to GBP2P (Class II) |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YOR204W | DED1 | 1 | 0 | ATP-dependent RNA helicase |
| Cluster | BI0654: |
| YGL179C | TOS3 | 1 | 0 | strong similarity to PAK1P, ELM1P and KIN82P (Class II) |
| YKR096W | 1 | 0 | similarity to mitochondrial aldehyde dehydrogenase Ald1p (Class III) |
| YGL115W | SNF4 | 10 | 0 | nuclear regulatory protein |
| Cluster | BI0655: |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YMR213W | CEF1 | 2 | 0 | required during G2/M transition |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| Cluster | BI0656: |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| Cluster | BI0657: |
| YCL011C | GBP2 | 2 | 0 | potential telomere-associated protein |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YLR432W | IMD3 | 4 | 0 | strong similarity to IMP dehydrogenases, Pur5p and YML056C (Class II) |
| YDL084W | SUB2 | 1 | 0 | probably involved in pre-mRNA splicing |
| YHR167W | THP2 | 1 | 0 | subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination |
| YNL253W | 1 | 0 | similarity to hypothetical protein C. elegans (Class IV) |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YML062C | MFT1 | 1 | 0 | mitochondrial fusion target protein |
| Cluster | BI0658: |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YLR335W | NUP2 | 6 | 1 | nuclear pore protein |
| Cluster | BI0659: |
| YNL088W | TOP2 | 8 | 2 | DNA topoisomerase II (ATP-hydrolysing) |
| YOR061W | CKA2 | 4 | 2 | casein kinase II alpha' chain |
| YLR154C | 1 | 0 | hypothetical protein (Class V) |
| YDL101C | DUN1 | 1 | 0 | protein kinase |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| Cluster | BI0660: |
| YDR092W | UBC13 | 1 | 0 | E2 ubiquitin-conjugating enzyme |
| YCR066W | RAD18 | 2 | 0 | DNA repair protein |
| YHR137W | ARO9 | 2 | 0 | aromatic amino acid aminotransferase II |
| YHR137W | ARO9 | 2 | 0 | aromatic amino acid aminotransferase II |
| YGL087C | MMS2 | 0 | 0 | part of the error-free postreplication repair pathway |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YLR059C | REX2 | 1 | 0 | putative 3'-5' exonuclease |
| YGL087C | MMS2 | 0 | 0 | part of the error-free postreplication repair pathway |
| Cluster | BI0661: |
| YNL182C | 4 | 1 | weak similarity to S.pombe hypothetical protein (Class IV) |
| YNL182C | 4 | 1 | weak similarity to S.pombe hypothetical protein (Class IV) |
| Q0032 | 0 | 0 | questionable ORF (Class VI) |
| YLR423C | APG17 | 62 | 1 | protein involved in authophagy |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| Cluster | BI0662: |
| YLR320W | 0 | 0 | hypothetical protein (Class V) |
| YLR320W | 0 | 0 | hypothetical protein (Class V) |
| YHR154W | ESC4 | 0 | 0 | Establishes Silent Chromatin |
| YJL047C | RTT101 | 3 | 0 | weak similarity to CDC53P (Class III) |
| YJL047C | RTT101 | 3 | 0 | weak similarity to CDC53P (Class III) |
| YDL215C | GDH2 | 2 | 0 | NAD-specific glutamate dehydrogenase (NAD) |
| YHR154W | ESC4 | 0 | 0 | Establishes Silent Chromatin |
| Cluster | BI0663: |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YKL078W | DHR2 | 0 | 0 | RNA helicase, involved in ribosomal RNA maturation |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| Cluster | BI0664: |
| YNL006W | LST8 | 1 | 0 | required for transport of permeases from the golgi to the plasma membrane |
| YFR039C | 1 | 0 | similarity to hypothetical protein YGL228W (Class IV) |
| Cluster | BI0665: |
| YGR092W | DBF2 | 7 | 1 | ser/thr protein kinase related to DBF20P |
| YIL106W | MOB1 | 9 | 1 | required for completion of mitosis and maintenance of ploidy |
| Cluster | BI0666: |
| YCL011C | GBP2 | 2 | 0 | potential telomere-associated protein |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| YHR167W | THP2 | 1 | 0 | subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination |
| YDL084W | SUB2 | 1 | 0 | probably involved in pre-mRNA splicing |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YDR138W | HPR1 | 0 | 0 | hyperrecombination protein related to TOP1P |
| YML062C | MFT1 | 1 | 0 | mitochondrial fusion target protein |
| Cluster | BI0667: |
| YBR195C | MSI1 | 3 | 1 | chromatin assembly complex, subunit p50 |
| YOR100C | CRC1 | 2 | 0 | mitochondrial carnitine carrier, member of the mitochondrial carrier (MCF) family |
| YPR018W | RLF2 | 3 | 1 | chromatin assembly complex, subunit p90 |
| YOR308C | SNU66 | 3 | 0 | component of U4/U6.U5 snRNP |
| Cluster | BI0668: |
| YKR026C | GCN3 | 15 | 0 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YOR317W | FAA1 | 4 | 0 | long-chain-fatty-acid--CoA ligase |
| YDL052C | SLC1 | 1 | 0 | fatty acyltransferase |
| YLR289W | GUF1 | 0 | 0 | strong similarity to E. coli elongation factor-type GTP-binding protein lepa (Class II) |
| YMR241W | YHM2 | 0 | 0 | yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| Cluster | BI0669: |
| YIL066C | RNR3 | 1 | 0 | ribonucleotide reductase, repair inducible large subunit |
| YLR163C | MAS1 | 0 | 0 | mitochondrial processing peptidase |
| YHR024C | MAS2 | 0 | 0 | processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial |
| Cluster | BI0670: |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| Cluster | BI0671: |
| YGR052W | 2 | 0 | similarity to ser/thr protein kinases (Class III) |
| YGR052W | 2 | 0 | similarity to ser/thr protein kinases (Class III) |
| YCL030C | HIS4 | 0 | 0 | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase |
| YDL137W | ARF2 | 0 | 0 | GTP-binding protein of the ARF family |
| Cluster | BI0673: |
| YER117W | RPL23B | 1 | 0 | ribosomal protein L23.e |
| YDR361C | BCP1 | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YPL208W | 3 | 0 | similarity to YHL039W (Class IV) |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| Cluster | BI0674: |
| YDR369C | XRS2 | 1 | 1 | DNA repair protein |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YDR032C | PST2 | 3 | 0 | strong similarity to S.pombe obr1 brefeldin A resistance protein (Class II) |
| YMR224C | MRE11 | 5 | 2 | DNA repair and meiotic recombination protein |
| YKL022C | CDC16 | 10 | 0 | subunit of anaphase-promoting complex (cyclosome) |
| YNL250W | RAD50 | 1 | 1 | DNA repair protein |
| YLR109W | AHP1 | 0 | 0 | Alkyl hydroperoxide reductase |
| YJL167W | ERG20 | 1 | 0 | farnesyl-pyrophosphate synthetase |
| Cluster | BI0675: |
| YER017C | AFG3 | 2 | 0 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| Cluster | BI0676: |
| YNL023C | FAP1 | 3 | 0 | similarity to D.melanogaster shuttle craft protein (Class III) |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| Cluster | BI0677: |
| YPL131W | RPL5 | 2 | 0 | 60S large subunit ribosomal protein L5.e |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| Cluster | BI0678: |
| YOL062C | APM4 | 1 | 0 | AP-2 complex subunit, mu2 subunit, 55 KD |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| Cluster | BI0679: |
| YCR009C | RVS161 | 4 | 1 | similarity to human amphiphysin and RVS167P (Class III) |
| YGL060W | 2 | 1 | strong similarity to hypothetical protein YBR216C (Class IV) |
| YDR388W | RVS167 | 9 | 2 | reduced viability upon starvation protein |
| YOR232W | MGE1 | 9 | 0 | heat shock protein - chaperone |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| Cluster | BI0680: |
| YPL259C | APM1 | 2 | 1 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YKL135C | APL2 | 7 | 2 | AP-1 complex subunit, beta1-adaptin, 82 KD |
| YPR029C | APL4 | 5 | 1 | AP-1 complex subunit, gamma-adaptin, 94 KD |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YLR328W | 7 | 0 | strong similarity to YGR010W (Class IV) |
| YER165W | PAB1 | 15 | 0 | mRNA polyadenylate-binding protein |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YOL010W | RCL1 | 1 | 0 | similarity to human RNA 3'-terminal phosphate cyclase (Class III) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YOR187W | TUF1 | 2 | 0 | translation elongation factor TU, mitochondrial |
| Cluster | BI0681: |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YDR194C | MSS116 | 1 | 0 | RNA helicase of the DEAD box family, mitochondrial |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YGL068W | 0 | 0 | strong similarity to Cricetus mitochrondial ribosomal L12 protein (Class II) |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YDR224C | HTB1 | 2 | 0 | histone H2B |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YKR024C | DBP7 | 1 | 0 | RNA helicase required for 60S ribosomal subunit assembly |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YGR162W | TIF4631 | 6 | 1 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YHL038C | CBP2 | 0 | 0 | apo-cytochrome b pre-mRNA processing protein 2 |
| YOR310C | NOP58 | 3 | 0 | required for pre-18S rRNA processing |
| Cluster | BI0682: |
| YFR021W | NMR1 | 1 | 0 | similarity to hypothetical protein YPL100W (Class IV) |
| YPL258C | THI21 | 1 | 0 | similarity to B.subtilis transcriptional activator tenA, and strong similarity to hypothetical proteins YOL055C and YPR121W (Class III) |
| YDL047W | SIT4 | 4 | 1 | ser/thr protein phosphatase |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| Cluster | BI0683: |
| YHR169W | DBP8 | 1 | 0 | strong similarity to DRS1P and other probable ATP-dependent RNA helicases (Class II) |
| YDR238C | SEC26 | 1 | 0 | coatomer complex beta chain of secretory pathway vesicles |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YDL086W | 1 | 0 | similarity to hypothetical Synechocystis protein (Class IV) |
| YHR179W | OYE2 | 2 | 0 | NADPH dehydrogenase (old yellow enzyme), isoform 1 |
| YER070W | RNR1 | 1 | 0 | ribonucleoside-diphosphate reductase, large subunit |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YPR121W | THI22 | 0 | 0 | similarity to B.subtilis transcriptional activator tenA (Class III) |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YAR019C | CDC15 | 0 | 0 | protein kinase of the MAP kinase kinase kinase family |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| Cluster | BI0684: |
| YNL189W | SRP1 | 140 | 2 | karyopherin-alpha or importin |
| YLR335W | NUP2 | 6 | 2 | nuclear pore protein |
| YLR347C | KAP95 | 35 | 2 | karyopherin-beta |
| Cluster | BI0685: |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YCR084C | TUP1 | 3 | 0 | general transcription repressor |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| Cluster | BI0686: |
| YER112W | LSM4 | 14 | 1 | Sm-like (Lsm) protein |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YCR077C | PAT1 | 20 | 1 | topoisomerase II-associated protein |
| Cluster | BI0687: |
| YBR135W | CKS1 | 10 | 3 | cyclin-dependent kinases regulatory subunit |
| YPR120C | CLB5 | 3 | 1 | cyclin, B-type |
| YEL034W | HYP2 | 2 | 0 | translation initiation factor eIF5A.1 |
| YDL155W | CLB3 | 5 | 2 | cyclin, G2/M-specific |
| YMR199W | CLN1 | 5 | 1 | cyclin, G1/S-specific |
| YER138C | 0 | 0 |
| YPR119W | CLB2 | 12 | 2 | cyclin, G2/M-specific |
| YDR170W-A | 0 | 0 |
| YBR160W | CDC28 | 14 | 5 | cyclin-dependent protein kinase |
| YLR226W | BUR2 | 2 | 0 | divergent CDK-cyclin complex |
| Cluster | BI0688: |
| YLR433C | CNA1 | 5 | 1 | calcineurin B, catalytic subunit |
| YGR263C | 3 | 0 | weak similarity to E.coli lipase like enzyme (Class III) |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| Cluster | BI0689: |
| YDR227W | SIR4 | 6 | 2 | silencing regulatory and DNA-repair protein |
| YFL045C | SEC53 | 2 | 1 | phosphomannomutase |
| YLR442C | SIR3 | 2 | 1 | silencing regulatory and DNA-repair protein |
| YFL006W | 0 | 0 | similarity to hypothetical protein TRCDSEMBL:AB024034_15 A. thaliana (Class IV) |
| YFL007W | BLM3 | 0 | 0 | weak similarity to Mms19p (Class IV) |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YDL042C | SIR2 | 3 | 1 | silencing regulatory protein and DNA-repair protein |
| YFL007W | BLM3 | 0 | 0 | weak similarity to Mms19p (Class IV) |
| YLR442C | SIR3 | 2 | 1 | silencing regulatory and DNA-repair protein |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YDL042C | SIR2 | 3 | 1 | silencing regulatory protein and DNA-repair protein |
| Cluster | BI0690: |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YDR131C | 2 | 0 | similarity to hypothetical protein YJL149W (Class IV) |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| YDR328C | SKP1 | 17 | 0 | kinetochore protein complex CBF3, subunit D |
| Cluster | BI0691: |
| YAL015C | NTG1 | 0 | 0 | DNA repair protein |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YEL030W | ECM10 | 0 | 0 | heat shock protein of HSP70 family |
| YNL037C | IDH1 | 2 | 0 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial |
| YMR146C | TIF34 | 4 | 0 | translation initiation factor eIF3, p39 subunit |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YMR058W | FET3 | 1 | 0 | cell surface ferroxidase, high affinity |
| YJR068W | RFC2 | 2 | 0 | DNA replication factor C, 41 KD subunit |
| YEL060C | PRB1 | 3 | 0 | protease B, vacuolar |
| YPR110C | RPC40 | 6 | 0 | DNA-directed RNA polymerase I, III 40 KD subunit |
| Cluster | BI0693: |
| YDR394W | RPT3 | 7 | 3 | 26S proteasome regulatory subunit |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YLR306W | UBC12 | 1 | 0 | E2 ubiquitin-conjugating enzyme |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YOR259C | RPT4 | 3 | 2 | 26S proteasome regulatory subunit |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL029W | ARP2 | 2 | 0 | actin-like protein |
| YGR232W | NAS6 | 3 | 1 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YGL004C | 0 | 0 | weak similarity to TUP1P (Class III) |
| YKL073W | LHS1 | 0 | 0 | chaperone of the ER lumen |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| Cluster | BI0694: |
| YJR017C | ESS1 | 1 | 0 | processing/termination factor 1 |
| YIL033C | BCY1 | 6 | 0 | cAMP dependent protein kinase, regulatory subunit |
| YGR253C | PUP2 | 2 | 0 | 20S proteasome subunit(alpha5) |
| YGR186W | TFG1 | 0 | 0 | TFIIF subunit (transcription initiation factor), 105 kD |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YML010W | SPT5 | 0 | 0 | transcription elongation protein |
| YIL021W | RPB3 | 8 | 0 | DNA-directed RNA-polymerase II, 45 kDa |
| YLL026W | HSP104 | 2 | 0 | heat shock protein |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YDR343C | HXT6 | 1 | 0 | high-affinity hexose transporter |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YLR438W | CAR2 | 4 | 0 | ornithine aminotransferase |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YDR457W | TOM1 | 1 | 0 | E3 ubiqitin ligase required for G2/M transition |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YHR027C | RPN1 | 0 | 0 | 26S proteasome regulatory subunit |
| Cluster | BI0695: |
| YJL068C | 1 | 0 | strong similarity to human esterase D (Class II) |
| YJL068C | 1 | 0 | strong similarity to human esterase D (Class II) |
| YLR354C | TAL1 | 1 | 0 | transaldolase |
| Cluster | BI0696: |
| YAL021C | CCR4 | 2 | 1 | transcriptional regulator |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| YDL165W | CDC36 | 6 | 0 | transcription factor |
| YNR052C | POP2 | 8 | 1 | required for glucose derepression |
| YCR093W | CDC39 | 4 | 0 | nuclear protein |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YOR027W | STI1 | 1 | 0 | stress-induced protein |
| YGR184C | UBR1 | 1 | 0 | ubiquitin-protein ligase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| Cluster | BI0697: |
| YNL113W | RPC19 | 7 | 0 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| Cluster | BI0698: |
| YHR135C | YCK1 | 4 | 0 | casein kinase I isoform |
| 0 | 0 |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| Cluster | BI0700: |
| YNL260C | 3 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YNL260C | 3 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YNL008C | 1 | 0 | similarity to YMR119W (Class IV) |
| Cluster | BI0701: |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YPR178W | PRP4 | 4 | 1 | U4/U6 snRNP 52 KD protein |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| Cluster | BI0702: |
| YJR061W | 0 | 0 | similarity to MNN4P (Class III) |
| YJR061W | 0 | 0 | similarity to MNN4P (Class III) |
| YKL168C | KKQ8 | 1 | 0 | ser/thr protein kinase |
| Cluster | BI0703: |
| YBR055C | PRP6 | 3 | 0 | snRNP(U4/U6)-associated splicing factor |
| YMR105C | PGM2 | 0 | 0 | phosphoglucomutase, major isoform |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YKL085W | MDH1 | 0 | 0 | malate dehydrogenase precursor, mitochondrial |
| YMR120C | ADE17 | 0 | 0 | 5-aminoimidazole-4-carboxamide ribotide transformylase |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| Cluster | BI0704: |
| YNL128W | TEP1 | 1 | 0 | weak similarity to tensin and to the mammalian tumor suppressor gene product MMAC1/PTEN/TEP1 (Class III) |
| YPL164C | MLH3 | 0 | 0 | insertion and deletion mismatch repair protein |
| YMR108W | ILV2 | 0 | 0 | acetolactate synthase |
| YIL149C | MLP2 | 0 | 0 | involved in translocation of macromolecules between the nucleoplasm and the NPC |
| Cluster | BI0705: |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YGL049C | TIF4632 | 3 | 1 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGR162W | TIF4631 | 6 | 2 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| Cluster | BI0706: |
| YPL031C | PHO85 | 14 | 0 | cyclin-dependent protein kinase |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| YJR104C | SOD1 | 0 | 0 | copper-zinc superoxide dismutase |
| Cluster | BI0707: |
| YNL317W | PFS2 | 6 | 1 | polyadenylation factor I subunit 2 required for mRNA 3'-end processing, bridges two mRNA 3'-end processing factors |
| YDR212W | TCP1 | 2 | 0 | component of chaperonin-containing T-complex |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDR301W | CFT1 | 7 | 1 | pre-mRNA 3'-end processing factor CF II |
| YGR187C | HGH1 | 3 | 0 | weak similarity to human HMG1P and HMG2P (Class III) |
| Cluster | BI0708: |
| YGR052W | 2 | 0 | similarity to ser/thr protein kinases (Class III) |
| YGR052W | 2 | 0 | similarity to ser/thr protein kinases (Class III) |
| YCL030C | HIS4 | 0 | 0 | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase |
| YLR127C | APC2 | 12 | 0 | component of the anaphase promoting complex |
| Cluster | BI0709: |
| YLR442C | SIR3 | 2 | 0 | silencing regulatory and DNA-repair protein |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YMR307W | GAS1 | 2 | 0 | glycophospholipid-anchored surface glycoprotein |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YMR223W | UBP8 | 1 | 0 | similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P (Class III) |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YKR101W | SIR1 | 2 | 0 | silencing regulatory protein |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YDL185W | TFP1 | 0 | 0 | H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar |
| YMR318C | 0 | 0 | strong similarity to alcohol-dehydrogenase (Class II) |
| YBL045C | COR1 | 3 | 0 | ubiquinol--cytochrome-c reductase 44K core protein |
| YMR226C | 2 | 0 | similarity to ketoreductases (Class III) |
| Cluster | BI0710: |
| YER020W | GPA2 | 2 | 0 | guanine nucleotide-binding regulatory protein |
| YPL036W | PMA2 | 2 | 0 | H+-transporting P-type ATPase, minor isoform, plasma membrane |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| Cluster | BI0711: |
| YML088W | UFO1 | 2 | 1 | involved in degradation of HO protein |
| YDR328C | SKP1 | 17 | 2 | kinetochore protein complex CBF3, subunit D |
| YDL132W | CDC53 | 13 | 1 | controls G1/S transition |
| Cluster | BI0712: |
| YNR010W | CSE2 | 2 | 0 | subunit of RNA polymerase II mediator complex |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| Cluster | BI0713: |
| YHR107C | CDC12 | 9 | 0 | septin |
| YHR060W | VMA22 | 10 | 0 | vacuolar ATPase assembly protein |
| YER091C | MET6 | 0 | 0 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase |
| YKL056C | 3 | 0 | strong similarity to human IgE-dependent histamine-releasing factor (Class II) |
| YGL062W | PYC1 | 0 | 0 | pyruvate carboxylase 1 |
| YML056C | IMD4 | 0 | 0 | strong similarity to IMP dehydrogenases (Class II) |
| YBR260C | RGD1 | 3 | 0 | similarity to C.elegans GTPase-activating protein (Class III) |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YHR043C | DOG2 | 1 | 0 | 2-deoxyglucose-6-phosphate phosphatase |
| YNL073W | MSK1 | 1 | 0 | lysyl-tRNA synthetase, mitochondrial |
| YHR044C | DOG1 | 0 | 0 | 2-deoxyglucose-6-phosphate phosphatase |
| Cluster | BI0714: |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| YNL055C | POR1 | 0 | 0 | mitochondrial outer membrane porin |
| YMR319C | FET4 | 1 | 0 | low affinity Fe(II) iron transport protein |
| Cluster | BI0715: |
| YKR055W | RHO4 | 5 | 0 | GTP-binding protein of the rho family |
| YKL216W | URA1 | 0 | 0 | dihydroorotate dehydrogenase |
| Cluster | BI0716: |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| YNL227C | 2 | 0 | similarity to dnaJ-like proteins (Class III) |
| YML001W | YPT7 | 2 | 0 | GTP-binding protein of the RAB family |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YHR214W-A | 0 | 0 | strong similarity to hypothetical protein YAR068W (Class IV) |
| YLR216C | CPR6 | 4 | 0 | member of the cyclophilin family |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| YHR033W | 1 | 0 | strong similarity to glutamate 5-kinase (Class II) |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YJL164C | TPK1 | 1 | 1 | cAMP-dependent protein kinase 1, catalytic chain |
| Cluster | BI0717: |
| YDL132W | CDC53 | 13 | 0 | controls G1/S transition |
| YLR352W | 3 | 0 | hypothetical protein (Class V) |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| Cluster | BI0718: |
| YFR028C | CDC14 | 1 | 0 | dual specificity phosphatase |
| YHR128W | FUR1 | 6 | 0 | uracil phosphoribosyltransferase |
| YOR032C | HMS1 | 1 | 0 | weak similarity to DNA-binding proteins |
| YPR069C | SPE3 | 0 | 0 | putrescine aminopropyltransferase (spermidine synthase) |
| YBR126C | TPS1 | 3 | 0 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YBR039W | ATP3 | 0 | 0 | F1F0-ATPase complex, F1 gamma subunit |
| YNL014W | HEF3 | 0 | 0 | translation elongation factor eEF3 homolog |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YKL150W | MCR1 | 1 | 0 | cytochrome-b5 reductase |
| YDR226W | ADK1 | 2 | 0 | adenylate kinase, cytosolic |
| YPR183W | DPM1 | 3 | 0 | dolichyl-phosphate beta-D-mannosyltransferase |
| YGL115W | SNF4 | 10 | 0 | nuclear regulatory protein |
| YDR453C | 2 | 0 | strong similarity to thiol-specific antioxidant proteins (Class II) |
| YDR298C | ATP5 | 1 | 0 | F1F0-ATPase complex, OSCP subunit |
| YKL016C | ATP7 | 0 | 0 | F1F0-ATPase complex, FO D subunit |
| Cluster | BI0719: |
| YDR388W | RVS167 | 9 | 1 | reduced viability upon starvation protein |
| YER125W | RSP5 | 12 | 0 | hect domain E3 ubiquitin-protein ligase |
| YCR009C | RVS161 | 4 | 1 | similarity to human amphiphysin and RVS167P (Class III) |
| Cluster | BI0720: |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YJR065C | ARP3 | 6 | 3 | actin related protein |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| Cluster | BI0721: |
| YJL128C | PBS2 | 4 | 0 | tyrosine protein kinase of the MAP kinase kinase family |
| YDL006W | PTC1 | 1 | 1 | protein serine/threonine phosphatase 2c |
| YDR162C | NBP2 | 1 | 1 | NAP1P-binding protein |
| YER178W | PDA1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) alpha chain precursor |
| YNR058W | BIO3 | 3 | 0 | DAPA aminotransferase |
| Cluster | BI0722: |
| YDR499W | LCD1 | 1 | 0 | cell cycle checkpoint protein |
| YLR355C | ILV5 | 0 | 0 | ketol-acid reducto-isomerase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| YMR303C | ADH2 | 1 | 0 | alcohol dehydrogenase II |
| YBR145W | ADH5 | 2 | 0 | alcohol dehydrogenase V |
| YOR176W | HEM15 | 5 | 0 | ferrochelatase precursor |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| Cluster | BI0723: |
| YHR115C | 5 | 0 | strong similarity to hypothetical protein YNL116W (Class IV) |
| YHR115C | 5 | 0 | strong similarity to hypothetical protein YNL116W (Class IV) |
| YNL116W | 5 | 0 | weak similarity to RING zinc finger protein from Gallus gallus (Class IV) |
| Cluster | BI0724: |
| YAL017W | FUN31 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| YPR160W | GPH1 | 0 | 0 | glycogen phosphorylase |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| YOL045W | 0 | 0 | similarity to ser/thr protein kinase (Class III) |
| Cluster | BI0725: |
| YML112W | CTK3 | 3 | 0 | carboxy-terminal domain (CTD) kinase, gamma subunit |
| YDR169C | STB3 | 1 | 0 | SIN3 protein-binding protein |
| YKL210W | UBA1 | 1 | 0 | E1-like (ubiquitin-activating) enzyme |
| YDR190C | RVB1 | 2 | 0 | RUVB-like protein |
| Cluster | BI0726: |
| YMR117C | SPC24 | 20 | 1 | spindle pole body protein |
| YER025W | GCD11 | 1 | 0 | translation initiation factor eIF2 gamma chain |
| YER018C | SPC25 | 1 | 1 | spindle pole body protein |
| YDL171C | GLT1 | 0 | 0 | glutamate synthase (NAPDPH) (GOGAT) |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| Cluster | BI0727: |
| YOR089C | VPS21 | 4 | 0 | GTP-binding protein |
| YNL093W | YPT53 | 1 | 0 | GTP-binding protein of the RAB family (RAS superfamily) |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YKR014C | YPT52 | 4 | 0 | GTP-binding protein of the rab family |
| YLR362W | STE11 | 16 | 0 | ser/thr protein kinase of the MEKK family |
| Cluster | BI0728: |
| YJL106W | IME2 | 2 | 0 | ser/thr protein kinase |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| Cluster | BI0729: |
| YHR107C | CDC12 | 9 | 3 | septin |
| YCR002C | CDC10 | 6 | 3 | cell division control protein |
| YLR314C | CDC3 | 5 | 3 | cell division control protein |
| YJR076C | CDC11 | 6 | 3 | septin |
| Cluster | BI0730: |
| YNL230C | ELA1 | 2 | 0 | weak similarity to mammalian transcription elongation factor elongin A (Class III) |
| YPL001W | HAT1 | 1 | 0 | histone acetyltransferase subunit |
| Cluster | BI0731: |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YKL009W | MRT4 | 1 | 0 | mRNA turnover 4 |
| YFR028C | CDC14 | 1 | 0 | dual specificity phosphatase |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YHR193C | EGD2 | 3 | 0 | alpha subunit of the nascent polypeptide-associated complex |
| YDR342C | HXT7 | 2 | 0 | high-affinity hexose transporter |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YFL002C | SPB4 | 1 | 0 | ATP-dependent RNA helicase of DEAH box family |
| YER120W | SCS2 | 0 | 0 | required for inositol metabolism |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YLR024C | UBR2 | 0 | 0 | similarity to ubiquitin--protein ligase UBR1P (Class III) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YLR369W | SSQ1 | 0 | 0 | mitochondrial heat shock protein 70 |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YER091C | MET6 | 0 | 0 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase |
| YMR100W | MUB1 | 0 | 0 | involved in budding |
| YER043C | SAH1 | 1 | 0 | S-adenosyl-L-homocysteine hydrolase |
| YFL045C | SEC53 | 2 | 0 | phosphomannomutase |
| YLR002C | 2 | 0 | similarity to hypothetical C. elegans protein (Class IV) |
| Cluster | BI0732: |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YLR304C | ACO1 | 1 | 0 | aconitate hydratase |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YPR190C | RPC82 | 2 | 0 | DNA-directed RNA polymerase III, 82 KD subunit |
| YFR011C | JUNK | 2 | 0 | ochre suppressor tyr-tRNA |
| Cluster | BI0733: |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YHR183W | GND1 | 0 | 0 | 6-phosphogluconate dehydrogenase |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| Cluster | BI0734: |
| YDL220C | CDC13 | 2 | 0 | cell division control protein |
| YGL256W | ADH4 | 1 | 0 | alcohol dehydrogenase IV |
| YHR208W | BAT1 | 0 | 0 | branched chain amino acid aminotransferase, mitochondrial |
| Cluster | BI0735: |
| YHR105W | 5 | 0 | weak similarity to MVP1P (Class III) |
| YHR105W | 5 | 0 | weak similarity to MVP1P (Class III) |
| YLL040C | VPS13 | 0 | 0 | involved in regulating membrane traffic |
| Cluster | BI0736: |
| YIL035C | CKA1 | 4 | 2 | casein kinase II, catalytic alpha chain |
| YML074C | NPI46 | 0 | 0 | proline cis-trans isomerase |
| YLR197W | SIK1 | 5 | 0 | involved in pre-rRNA processing |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YPL037C | EGD1 | 0 | 0 | GAL4 DNA-binding enhancer protein |
| YNL308C | KRI1 | 3 | 0 | similarity to S.pombe and C.elegans hypothetical proteins (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YOR039W | CKB2 | 9 | 2 | casein kinase II beta' chain |
| YBR010W | HHT1 | 3 | 0 | histone H3 |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YNL112W | DBP2 | 1 | 0 | ATP-dependent RNA helicase of DEAD box family |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YGL207W | SPT16 | 3 | 1 | general chromatin factor |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YCL043C | PDI1 | 2 | 0 | protein disulfide-isomerase precursor |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YMR172W | HOT1 | 1 | 0 | similarity to MSN1 protein (Class III) |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YER084W | 2 | 0 | questionable ORF (Class VI) |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YML069W | POB3 | 3 | 1 | protein that binds to DNA polymerase I (PolI) |
| Cluster | BI0737: |
| YGL131C | 0 | 0 | weak similarity to S.pombe hypothetical protein C3H1.12C (Class IV) |
| YGL131C | 0 | 0 | weak similarity to S.pombe hypothetical protein C3H1.12C (Class IV) |
| YLR413W | 2 | 0 | strong similarity to YKL187C (Class IV) |
| Cluster | BI0738: |
| YNL093W | YPT53 | 1 | 0 | GTP-binding protein of the RAB family (RAS superfamily) |
| 0 | 0 |
| YOR370C | MRS6 | 1 | 0 | geranylgeranyltransferase regulatory subunit |
| Cluster | BI0739: |
| YEL021W | URA3 | 0 | 0 | orotidine-5'-phosphate decarboxylase |
| YCL028W | RNQ1 | 1 | 0 | prion, epigenetic modifier of protein function |
| Cluster | BI0740: |
| YFR024C-A | 0 | 0 | similarity to Acanthamoeba myosin heavy chain IC and weak similarity to other myosin class I heavy chains (Class III) |
| YFR024C-A | 0 | 0 | similarity to Acanthamoeba myosin heavy chain IC and weak similarity to other myosin class I heavy chains (Class III) |
| YMR302C | PRP12 | 1 | 0 | involved in early maturation of pre-rRNA |
| YFR024C | 0 | 0 |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YOR039W | CKB2 | 9 | 0 | casein kinase II beta' chain |
| YOR042W | 0 | 0 | weak similarity to YDR273W (Class IV) |
| YJL045W | 1 | 0 | strong similarity to succinate dehydrogenase flavoprotein (Class II) |
| YLR422W | 0 | 0 | similarity to human DOCK180 protein (Class III) |
| Cluster | BI0741: |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YIL142W | CCT2 | 2 | 1 | chaperonin of the TCP1 ring complex, cytosolic |
| YJL014W | CCT3 | 0 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YDR212W | TCP1 | 2 | 1 | component of chaperonin-containing T-complex |
| Cluster | CZ0001: |
| YDL047W | SIT4 | 4 | 3 | ser/thr protein phosphatase |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YLR310C | CDC25 | 8 | 0 | GDP/GTP exchange factor for RAS1P and RAS2P |
| YFR019W | FAB1 | 0 | 0 | phosphatidylinositol 3-phosphate 5-kinase |
| YGL197W | MDS3 | 1 | 0 | negative regulator of early meiotic expression |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YFR040W | SAP155 | 1 | 1 | SIT4P-associated protein |
| YJL098W | SAP185 | 1 | 1 | SIT4P-associating protein |
| YKR028W | SAP190 | 3 | 1 | SIT4P-associated protein |
| YKL195W | 1 | 0 | similarity to rabbit histidine-rich calcium-binding protein (Class III) |
| YNL101W | 0 | 0 | similarity to YKL146W (Class IV) |
| YNL187W | 2 | 0 | hypothetical protein (Class V) |
| YOR267C | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| Cluster | CZ0002: |
| YDL219W | 1 | 0 | strong similarity to S.equisimilis hypothetical protein (Class IV) |
| YDL047W | SIT4 | 4 | 0 | ser/thr protein phosphatase |
| Cluster | CZ0003: |
| YLR127C | APC2 | 12 | 4 | component of the anaphase promoting complex |
| YGL240W | DOC1 | 10 | 4 | component of the anaphase promoting complex |
| YFL039C | ACT1 | 22 | 0 | actin |
| YNL172W | APC1 | 10 | 4 | subunit of anaphase-promoting complex (cyclosome) |
| YKL022C | CDC16 | 10 | 4 | subunit of anaphase-promoting complex (cyclosome) |
| YBL084C | CDC27 | 10 | 4 | subunit of anaphase-promoting complex (cyclosome) |
| Cluster | CZ0004: |
| YLR314C | CDC3 | 5 | 4 | cell division control protein |
| YCR002C | CDC10 | 6 | 4 | cell division control protein |
| YJR076C | CDC11 | 6 | 4 | septin |
| YHR107C | CDC12 | 9 | 4 | septin |
| YDL225W | SHS1 | 5 | 4 | septin |
| Cluster | CZ0005: |
| YBR200W | BEM1 | 10 | 2 | bud emergence mediator |
| YAL041W | CDC24 | 11 | 1 | GTP/GDP exchange factor for CDC42P |
| YER114C | BOI2 | 2 | 1 | budding protein |
| YLR357W | RSC2 | 1 | 0 | member of RSC complex, which remodels the structure of chromatin |
| Cluster | CZ0006: |
| YBR160W | CDC28 | 14 | 5 | cyclin-dependent protein kinase |
| YBR135W | CKS1 | 10 | 3 | cyclin-dependent kinases regulatory subunit |
| YDL155W | CLB3 | 5 | 2 | cyclin, G2/M-specific |
| YMR199W | CLN1 | 5 | 1 | cyclin, G1/S-specific |
| YPL256C | CLN2 | 3 | 2 | cyclin, G1/S-specific |
| YIR031C | DAL7 | 0 | 0 | malate synthase 2 |
| YBR295W | PCA1 | 0 | 0 | P-type Cu2+-transporting ATPase |
| YLR079W | SIC1 | 2 | 1 | p40 inhibitor of CDC28P-Clb protein kinase complex |
| YKR091W | SRL3 | 2 | 0 | similarity to YOR083W (Class IV) |
| YPL014W | 0 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0007: |
| YDR356W | NUF1 | 4 | 1 | spindle pole body component |
| YGR078C | PAC10 | 5 | 3 | GIM4 - Gim complex component |
| YLR212C | TUB4 | 7 | 4 | gamma tubulin |
| YDL126C | CDC48 | 3 | 0 | microsomal protein of CDC48/PAS1/SEC18 family of ATPases |
| YNL153C | GIM3 | 6 | 3 | Gim complex component |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YNL126W | SPC98 | 5 | 2 | spindle pole body component |
| YLR200W | YKE2 | 10 | 3 | Gim complex component |
| Cluster | CZ0008: |
| YIL026C | IRR1 | 3 | 2 | essential protein |
| YDL003W | MCD1 | 2 | 2 | Mitotic Chromosome Determinant |
| YFL008W | SMC1 | 6 | 3 | chromosome segregation protein |
| YJL074C | SMC3 | 3 | 3 | required for structural maintenance of chromosomes |
| YJL008C | CCT8 | 1 | 0 | component of chaperonin-containing T-complex |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YER147C | SCC4 | 1 | 0 | protein required for sister chromatid cohesion |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| Cluster | CZ0009: |
| YDL126C | CDC48 | 3 | 2 | microsomal protein of CDC48/PAS1/SEC18 family of ATPases |
| YKL213C | DOA1 | 1 | 1 | involved in ubiquitin-dependent proteolysis |
| YBR170C | NPL4 | 4 | 2 | nuclear protein localization factor and ER translocation component |
| YBL058W | SHP1 | 0 | 0 | potential regulatory subunit for GLC7P |
| YGR048W | UFD1 | 5 | 1 | ubiquitin fusion degradation protein |
| YNL271C | BNI1 | 8 | 0 | regulator of budding |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YGL246C | RAI1 | 0 | 0 | weak similarity to C.elegans dom-3 protein (Class III) |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YDR049W | 0 | 0 | similarity to C.elegans K06H7.3 protein (Class IV) |
| Cluster | CZ0010: |
| YLR103C | CDC45 | 3 | 2 | required for minichromosome maintenance and initiation of chromosomal DNA replication |
| YBR202W | CDC47 | 4 | 2 | cell division control protein |
| YBL023C | MCM2 | 4 | 0 | member of the MCM2P,MCM3P,CDC46P family |
| YGL201C | MCM6 | 4 | 0 | involved in replication |
| YML065W | ORC1 | 1 | 0 | origin recognition complex, 104 KD subunit |
| YBR060C | ORC2 | 0 | 0 | origin recognition complex, 72 kDa subunit |
| YLR274W | CDC46 | 3 | 2 | cell division control protein |
| YGL001C | ERG26 | 1 | 0 | C-3 sterol dehydrogenase (C-4 decarboxylase) |
| YDL171C | GLT1 | 0 | 0 | glutamate synthase (NAPDPH) (GOGAT) |
| YPL001W | HAT1 | 1 | 0 | histone acetyltransferase subunit |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YLL004W | ORC3 | 0 | 0 | origin recognition complex, 62 kDa subunit |
| YPR162C | ORC4 | 0 | 0 | origin recognition complex, 56 KD subunit |
| YNL261W | ORC5 | 1 | 0 | origin recognition complex, 50 kDa subunit |
| YHR118C | ORC6 | 0 | 0 | origin recognition complex, 50 KD subunit |
| YNL330C | RPD3 | 4 | 1 | histone deacetylase B |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOL004W | SIN3 | 8 | 1 | transcription regulatory protein |
| Cluster | CZ0011: |
| YGR163W | GTR2 | 2 | 0 | similarity to human ragA protein and GTR1P (Class III) |
| YBR158W | CST13 | 1 | 0 | weak similarity to TRCDSEMBL:AF176518_1 F-box protein FBL2; human (Class IV) |
| YGR098C | ESP1 | 1 | 0 | required for sister chromatid separation |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YCR015C | 0 | 0 | hypothetical protein (Class V) |
| YGR203W | 2 | 0 | weak similarity to X.laevis protein-tyrosin-phosphatase cdc homolog 2 and to hypothetical protein YPR200C (Class III) |
| Cluster | CZ0012: |
| YAL024C | LTE1 | 1 | 0 | GDP/GTP exchange factor |
| Cluster | CZ0013: |
| YBR057C | MUM2 | 4 | 0 | meiotic protein |
| YGL036W | MTC2 | 1 | 0 | similarity to EDE1P (Class IV) |
| YKR031C | SPO14 | 0 | 0 | phospholipase D |
| Cluster | CZ0014: |
| YAL009W | SPO7 | 1 | 1 | meiotic protein |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YDR211W | GCD6 | 1 | 0 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YDL040C | NAT1 | 0 | 0 | protein N-acetyltransferase subunit |
| YHR004C | NEM1 | 2 | 1 | required for nuclear morphology |
| YJL176C | SWI3 | 2 | 0 | transcription regulatory protein |
| Cluster | CZ0015: |
| YJL060W | 0 | 0 | similarity to kynurenine aminotransferase and glutamine-phenylpyruvate transaminase (Class III) |
| YLR314C | CDC3 | 5 | 0 | cell division control protein |
| Cluster | CZ0016: |
| YKL007W | CAP1 | 2 | 0 | F-actin capping protein alpha subunit |
| YIL034C | CAP2 | 16 | 0 | F-actin capping protein, beta subunit |
| YER071C | 10 | 0 | hypothetical protein (Class V) |
| YIR003W | 1 | 0 | weak similarity to mammalian neurofilament triplet H proteins (Class III) |
| Cluster | CZ0017: |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YAL029C | MYO4 | 1 | 1 | myosin heavy chain, unconventional (class V) isoform |
| YBR130C | SHE3 | 2 | 0 | required for mother cell-specific expression of HO |
| YFL039C | ACT1 | 22 | 1 | actin |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YGL106W | MLC1 | 2 | 1 | MYO2P light chain |
| YPR188C | MLC2 | 1 | 0 | similarity to calmodulin and calmodulin-related proteins (Class III) |
| YOR326W | MYO2 | 2 | 1 | myosin heavy chain |
| YMR309C | NIP1 | 7 | 0 | associated with 40s ribosomal subunit |
| YKL130C | SHE2 | 19 | 0 | required for mother cell-specific expression of HO |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| Cluster | CZ0018: |
| YOR181W | LAS17 | 6 | 2 | component of actin cortical patches |
| YBL007C | SLA1 | 2 | 2 | cytoskeleton assembly control protein |
| YLR337C | VRP1 | 1 | 1 | verprolin |
| YHR114W | BZZ1 | 91 | 0 | similarity to S.pombe hypothetical protein and human protein-tyrosine kinase fer (Class III) |
| YGL206C | CHC1 | 3 | 0 | clathrin heavy chain |
| YJL201W | ECM25 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YNL084C | END3 | 3 | 0 | required for endocytosis and cytoskeletal organization |
| YNL106C | INP52 | 0 | 0 | phosphatidylinositol phosphate phosphatase |
| YER095W | RAD51 | 11 | 0 | DNA repair protein |
| YNL243W | SLA2 | 2 | 0 | cytoskeleton assembly control protein |
| YLR150W | STM1 | 2 | 0 | specific affinity for guanine-rich quadruplex nucleic acids |
| YCR030C | 5 | 0 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 (Class IV) |
| YPR171W | 2 | 0 | hypothetical protein (Class V) |
| YML001W | YPT7 | 2 | 0 | GTP-binding protein of the RAB family |
| YHR016C | YSC84 | 5 | 1 | strong similarity to hypothetical protein YFR024C-A (Class IV) |
| Cluster | CZ0019: |
| YIL062C | ARC15 | 2 | 2 | subunit of the ARP2/3 complex |
| YLR370C | ARC18 | 2 | 1 | subunit of the ARP2/3 complex |
| YNR035C | ARC35 | 2 | 1 | subunit of the ARP2/3 complex |
| YBR234C | ARC40 | 2 | 0 | ARP2/3 protein complex subunit, 40 kilodalton |
| YDL029W | ARP2 | 2 | 1 | actin-like protein |
| YJR065C | ARP3 | 6 | 5 | actin related protein |
| YKL013C | ARC19 | 3 | 2 | subunit of the ARP2/3 complex |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YJL008C | CCT8 | 1 | 0 | component of chaperonin-containing T-complex |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YOR361C | PRT1 | 7 | 0 | translation initiation factor eIF3 subunit |
| YNR053C | 6 | 0 | strong similarity to human breast tumor associated autoantigen (Class II) |
| Cluster | CZ0020: |
| YBL047C | EDE1 | 0 | 0 | similarity to mouse eps15R protein (Class III) |
| YNL243W | SLA2 | 2 | 0 | cytoskeleton assembly control protein |
| YCR030C | 5 | 0 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 (Class IV) |
| YDR348C | 2 | 0 | similarity to hypothetical protein YHR097C (Class IV) |
| Cluster | CZ0021: |
| YBL063W | KIP1 | 1 | 0 | kinesin-related protein |
| Cluster | CZ0022: |
| YJR148W | BAT2 | 2 | 0 | branched chain amino acid aminotransferase, cytosolic |
| Cluster | CZ0023: |
| YER120W | SCS2 | 0 | 0 | required for inositol metabolism |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YDR150W | NUM1 | 0 | 0 | nuclear migration protein |
| YHL020C | OPI1 | 1 | 0 | negative regulator of phospholipid biosynthesis pathway |
| YAR044W | OSH1 | 0 | 0 | similarity to human oxysterol binding protein (OSBP) (Class III) |
| YDL019C | OSH2 | 0 | 0 | similarity to SWH1P (Class III) |
| YLR305C | STT4 | 2 | 0 | phosphatidylinositol-4-kinase |
| YAR042W | SWH1 | 1 | 0 | similarity to mammalian oxysterol-binding proteins (Class III) |
| YGR086C | 3 | 0 | strong similarity to hypothetical protein YPL004C (Class IV) |
| Cluster | CZ0024: |
| YER081W | SER3 | 95 | 1 | 3-phosphoglycerate dehydrogenase |
| YIL074C | SER33 | 5 | 1 | 3-phosphoglycerate dehydrogenase |
| Cluster | CZ0025: |
| YLR058C | SHM2 | 2 | 0 | serine hydroxymethyltransferase, cytoplasmic |
| YFR009W | GCN20 | 1 | 0 | positive effector of GCN2P |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| Cluster | CZ0026: |
| YPR069C | SPE3 | 0 | 0 | putrescine aminopropyltransferase (spermidine synthase) |
| YLR146C | SPE4 | 1 | 0 | spermine synthase |
| Cluster | CZ0027: |
| YEL031W | SPF1 | 0 | 0 | P-type ATPase |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| Cluster | CZ0028: |
| YBR117C | TKL2 | 2 | 0 | transketolase 2 |
| YPR074C | TKL1 | 0 | 0 | transketolase 1 |
| Cluster | CZ0029: |
| YBR126C | TPS1 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 56 KD subunit |
| YLR411W | CTR3 | 1 | 0 | copper transport protein |
| YIR032C | DAL3 | 0 | 0 | ureidoglycolate hydrolase |
| YPR035W | GLN1 | 0 | 0 | glutamate--ammonia ligase |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YBL023C | MCM2 | 4 | 0 | member of the MCM2P,MCM3P,CDC46P family |
| YNL076W | MKS1 | 0 | 0 | pleiotropic regulatory factor |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YDR074W | TPS2 | 6 | 3 | alpha,alpha-trehalose-phosphate synthase, 102 KD subunit |
| YMR261C | TPS3 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 115 KD subunit |
| YBR265W | TSC10 | 2 | 0 | 3-ketosphinganine reductase |
| YML100W | TSL1 | 3 | 3 | alpha,alpha-trehalose-phosphate synthase, 123 KD subunit |
| YIL177C | 0 | 0 | strong similarity to subtelomeric encoded proteins (Class IV) |
| YMR251W | 0 | 0 | strong similarity to YKR076W and YGR154C (Class IV) |
| Cluster | CZ0030: |
| YER090W | TRP2 | 1 | 0 | anthranilate synthase component I |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YKL211C | TRP3 | 0 | 0 | anthranilate synthase component II |
| Cluster | CZ0031: |
| YBR139W | 1 | 0 | strong similarity to carboxypeptidase (Class II) |
| Cluster | CZ0032: |
| YPL111W | CAR1 | 6 | 0 | arginase |
| YPL160W | CDC60 | 0 | 0 | leucine--tRNA ligase, cytosolic |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| Cluster | CZ0033: |
| YNL045W | 1 | 0 | strong similarity to human leukotriene-A4 hydrolase (Class II) |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| Cluster | CZ0034: |
| YNL127W | 3 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YMR052W | FAR3 | 7 | 0 | involved in pheromone-mediated cell cycle arrest |
| YKL060C | FBA1 | 1 | 0 | fructose-bisphosphate aldolase |
| YKL152C | GPM1 | 0 | 0 | phosphoglycerate mutase |
| YGL251C | HFM1 | 0 | 0 | DNA/RNA helicase |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YLR371W | ROM2 | 2 | 0 | GDP/GTP exchange factor for RHO1P |
| YBR169C | SSE2 | 1 | 0 | heat shock protein of the HSP70 family |
| YDR050C | TPI1 | 0 | 0 | triose-phosphate isomerase |
| YGL131C | 0 | 0 | weak similarity to S.pombe hypothetical protein C3H1.12C (Class IV) |
| Cluster | CZ0035: |
| YNL313C | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YJR121W | ATP2 | 2 | 0 | F1F0-ATPase complex, F1 beta subunit |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YOR117W | RPT5 | 7 | 0 | 26S proteasome regulatory subunit |
| Cluster | CZ0036: |
| YNR046W | 1 | 1 | strong similarity to S.pombe hypothetical protein SPAC31A2.02 (Class IV) |
| YDR140W | FYV9 | 3 | 1 | similarity to probable methyltransferase S. pombe (Class III) |
| YNR050C | LYS9 | 3 | 0 | saccharopine dehydrogenase (NADP+, L-glutamate forming) |
| YML014W | 2 | 0 | strong similarity to S.pombe hypothetical protein, similarity to C.elegans hypothetical protein (Class IV) |
| YOL124C | 0 | 0 | weak similarity to M.jannaschii hypothetical protein (Class IV) |
| Cluster | CZ0037: |
| YOR164C | 5 | 0 | similarity to conserved hypothetical protein S. pombe (Class IV) |
| YNR050C | LYS9 | 3 | 0 | saccharopine dehydrogenase (NADP+, L-glutamate forming) |
| Cluster | CZ0038: |
| YOR356W | 0 | 0 | strong similarity to human electron transfer flavoprotein-ubiquinone oxidoreductase (Class II) |
| YOR243C | 0 | 0 | similarity to M.jannaschii hypothetical protein MJ0588 (Class IV) |
| Cluster | CZ0039: |
| YIL125W | KGD1 | 0 | 0 | 2-oxoglutarate dehydrogenase complex E1 component |
| YDR148C | KGD2 | 11 | 1 | 2-oxoglutarate dehydrogenase complex E2 component |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YPL213W | LEA1 | 2 | 0 | U2 A' snRNP protein |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YFR049W | YMR31 | 9 | 1 | ribosomal protein, mitochondrial |
| Cluster | CZ0040: |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YJR064W | CCT5 | 0 | 0 | T-complex protein 1, epsilon subunit |
| YDL047W | SIT4 | 4 | 0 | ser/thr protein phosphatase |
| YLR386W | 11 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| Cluster | CZ0041: |
| YDL055C | PSA1 | 2 | 0 | mannose-1-phosphate guanyltransferase |
| YBL039C | URA7 | 2 | 0 | CTP synthase 1 |
| YNR016C | ACC1 | 2 | 0 | acetyl-CoA carboxylase |
| YJL008C | CCT8 | 1 | 1 | component of chaperonin-containing T-complex |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YOR388C | FDH1 | 2 | 0 | strong similarity to H.polymorpha formate dehydrogenase (Class II) |
| YFR009W | GCN20 | 1 | 0 | positive effector of GCN2P |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YER086W | ILV1 | 7 | 0 | anabolic serine and threonine dehydratase precursor |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR151C | RPB2 | 2 | 0 | DNA-directed RNA polymerase II, 140 kDa chain |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 1 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 0 | 26S proteasome regulatory subunit |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YJL074C | SMC3 | 3 | 0 | required for structural maintenance of chromosomes |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YML028W | TSA1 | 2 | 0 | thiol-specific antioxidant |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YKL196C | YKT6 | 4 | 0 | SNARE protein for Endoplasmic Reticulum-Golgi transport |
| YOL098C | 0 | 0 | similarity to hypothetical S.pombe protein (Class IV) |
| YOR086C | 0 | 0 | weak similarity to synaptogamines (Class III) |
| Cluster | CZ0042: |
| YBR221C | PDB1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) beta chain precursor |
| YDR430C | 0 | 0 | similarity to C.perfringens hypothetical hypA protein (Class IV) |
| YPL259C | APM1 | 2 | 0 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YDR069C | DOA4 | 2 | 0 | ubiquitin-specific protease |
| YBR208C | DUR1,2 | 0 | 0 | urea amidolyase |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| YNL071W | LAT1 | 0 | 0 | dihydrolipoamide S-acetyltransferase |
| YFL018C | LPD1 | 5 | 0 | dihydrolipoamide dehydrogenase precursor |
| YER178W | PDA1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) alpha chain precursor |
| YGR193C | PDX1 | 1 | 0 | pyruvate dehydrogenase complex protein X |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YFR004W | RPN11 | 3 | 0 | 26S proteasome regulatory subunit |
| YBR044C | TCM62 | 3 | 0 | chaperone required for assembly of mitochondrial succinate dehydrogenase |
| Cluster | CZ0043: |
| YBR155W | CNS1 | 6 | 0 | weak similarity to stress-induced STI1P (Class III) |
| YGR187C | HGH1 | 3 | 0 | weak similarity to human HMG1P and HMG2P (Class III) |
| Cluster | CZ0044: |
| YJL002C | OST1 | 2 | 1 | oligosaccharyltransferase, alpha subunit |
| YGL022W | STT3 | 3 | 3 | oligosaccharyl transferase subunit |
| YEL002C | WBP1 | 2 | 2 | oligosaccharyl transferase beta subunit precursor |
| YML130C | ERO1 | 1 | 0 | required for protein disulfide bond formation in the ER |
| YML019W | OST6 | 1 | 0 | N-oligosaccharyltransferase complex subunit |
| YLR208W | SEC13 | 5 | 0 | protein transport protein |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YMR149W | SWP1 | 4 | 2 | oligosaccharyltransferase delta subunit |
| YMR146C | TIF34 | 4 | 0 | translation initiation factor eIF3, p39 subunit |
| Cluster | CZ0045: |
| YBR127C | VMA2 | 1 | 0 | H+-ATPase V1 domain 60 KD subunit, vacuolar |
| YGR020C | VMA7 | 3 | 0 | H+-ATPase V1 domain 14 kDa subunit, vacuolar |
| YEL051W | VMA8 | 0 | 0 | H+-ATPsynthase V1 domain 32 KD subunit, vacuolar |
| YJR033C | RAV1 | 1 | 0 | similarity to Drosophila DmX gene (Class III) |
| YPR036W | VMA13 | 0 | 0 | H+-ATPase V1 domain 54 KD subunit, vacuolar |
| YOR332W | VMA4 | 1 | 1 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YKL080W | VMA5 | 1 | 0 | H+-ATPase V1 domain 42 KD subunit, vacuolar |
| YLR447C | VMA6 | 88 | 1 | H+-ATPase V0 domain 36 KD subunit, vacuolar |
| YOR270C | VPH1 | 2 | 0 | H+-ATPase V0 domain 95K subunit, vacuolar |
| Cluster | CZ0046: |
| YBL045C | COR1 | 3 | 1 | ubiquinol--cytochrome-c reductase 44K core protein |
| YPR191W | QCR2 | 6 | 1 | ubiquinol--cytochrome-c reductase 40KD chain II |
| Cluster | CZ0047: |
| YDL067C | COX9 | 1 | 0 | cytochrome-c oxidase chain VIIA |
| YGL187C | COX4 | 4 | 0 | cytochrome-c oxidase chain IV |
| YNL052W | COX5A | 0 | 0 | cytochrome-c oxidase chain V.A precursor |
| YHR051W | COX6 | 0 | 0 | cytochrome-c oxidase subunit VI |
| Cluster | CZ0048: |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YJR045C | SSC1 | 4 | 0 | mitochondrial heat shock protein 70-related protein |
| Cluster | CZ0049: |
| YLR359W | ADE13 | 0 | 0 | adenylosuccinate lyase |
| YOR361C | PRT1 | 7 | 0 | translation initiation factor eIF3 subunit |
| Cluster | CZ0050: |
| YGR254W | ENO1 | 1 | 0 | enolase I (2-phosphoglycerate dehydratase) |
| YJR045C | SSC1 | 4 | 0 | mitochondrial heat shock protein 70-related protein |
| Cluster | CZ0051: |
| YMR300C | ADE4 | 0 | 0 | amidophosphoribosyltransferase |
| YAL012W | CYS3 | 2 | 0 | cystathionine gamma-lyase |
| YMR235C | RNA1 | 2 | 0 | GTPase activating protein |
| Cluster | CZ0052: |
| YML126C | ERG13 | 1 | 0 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
| YFL039C | ACT1 | 22 | 0 | actin |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YKL125W | RRN3 | 0 | 0 | RNA polymerase I specific transcription factor |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YNL119W | 0 | 0 | weak similarity to M.jannaschii hypothetical protein MJ1257 (Class IV) |
| Cluster | CZ0053: |
| YBR207W | FTH1 | 2 | 0 | similarity to Iron permease FTR1P (YER145C) (Class III) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YFL041W | FET5 | 0 | 0 | multicopy oxidase |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YEL022W | GEA2 | 0 | 0 | GDP/GTP exchange factor for ARF |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YER021W | RPN3 | 2 | 0 | 26S proteasome regulatory subunit |
| Cluster | CZ0054: |
| YCL030C | HIS4 | 0 | 0 | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase |
| YDL160C | DHH1 | 13 | 0 | putative RNA helicase of the DEAD box family |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| Cluster | CZ0055: |
| YBR011C | IPP1 | 0 | 0 | inorganic pyrophosphatase, cytoplasmic |
| YMR267W | PPA2 | 3 | 0 | inorganic pyrophosphatase, mitochondrial |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YLR371W | ROM2 | 2 | 1 | GDP/GTP exchange factor for RHO1P |
| YLR425W | TUS1 | 1 | 0 | similarity to GDP-GTP exchange factors (Class III) |
| YDL203C | 6 | 1 | similarity to SKT5P (Class III) |
| YPL066W | 1 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0056: |
| YGL009C | LEU1 | 0 | 0 | 3-isopropylmalate dehydratase |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| Cluster | CZ0057: |
| YBR115C | LYS2 | 0 | 0 | L-aminoadipate-semialdehyde dehydrogenase, large subunit |
| YGL154C | LYS5 | 3 | 0 | L-aminoadipate-semialdehyde dehydrogenase, small subunit |
| Cluster | CZ0058: |
| YFR021W | NMR1 | 1 | 0 | similarity to hypothetical protein YPL100W (Class IV) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| Cluster | CZ0059: |
| YAR044W | OSH1 | 0 | 0 | similarity to human oxysterol binding protein (OSBP) (Class III) |
| YLR397C | AFG2 | 2 | 0 | strong similarity to CDC48 (Class II) |
| YGR192C | TDH3 | 1 | 0 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| Cluster | CZ0060: |
| YEL058W | PCM1 | 0 | 0 | phosphoacetylglucosamine mutase |
| YNL218W | 6 | 0 | similarity to E.coli hypothetical protein in serS 5'region (Class IV) |
| Cluster | CZ0061: |
| YMR205C | PFK2 | 1 | 1 | 6-phosphofructokinase, beta subunit |
| YGR240C | PFK1 | 3 | 1 | 6-phosphofructokinase, alpha subunit |
| Cluster | CZ0062: |
| YBL022C | PIM1 | 0 | 0 | ATP-dependent protease, mitochondrial |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| Cluster | CZ0063: |
| YDR300C | PRO1 | 1 | 0 | glutamate 5-kinase |
| YER107C | GLE2 | 6 | 0 | required for nuclear pore complex structure and function |
| Cluster | CZ0064: |
| YOR323C | PRO2 | 0 | 0 | gamma-glutamyl phosphate reductase |
| YCR079W | 1 | 0 | weak similarity to A.thaliana protein phosphatase 2C (Class III) |
| Cluster | CZ0065: |
| YDR164C | SEC1 | 2 | 0 | protein transport protein |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YBR196C | PGI1 | 1 | 0 | glucose-6-phosphate isomerase |
| Cluster | CZ0066: |
| YHR012W | VPS29 | 2 | 1 | involved in vacuolar protein sorting |
| YJL154C | VPS35 | 5 | 1 | protein-sorting protein, vacuolar |
| Cluster | CZ0067: |
| YAL053W | 0 | 0 | strong similarity to hypothetical proteins YOR365C,YGL139W,YPL221W (Class IV) |
| YAL026C | DRS2 | 1 | 0 | P-type amino-phospholipids-ATPase |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YOR153W | PDR5 | 0 | 0 | pleiotropic drug resistance protein |
| YML072C | 0 | 0 | similarity to YOR3141C and YNL087W (Class III) |
| Cluster | CZ0068: |
| YGL206C | CHC1 | 3 | 1 | clathrin heavy chain |
| YPL106C | SSE1 | 0 | 0 | heat shock protein of HSP70 family |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YGR167W | CLC1 | 5 | 1 | clathrin light chain |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YML028W | TSA1 | 2 | 0 | thiol-specific antioxidant |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| Cluster | CZ0069: |
| YAL007C | ERP2 | 0 | 0 | p24 protein involved in membrane trafficking |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YGL200C | EMP24 | 4 | 1 | component of the COPII-coated vesicles, 24 kDa |
| YML012W | ERV25 | 2 | 1 | component of the COPII-coated vesicles, 25 Kda |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YPL211W | NIP7 | 3 | 0 | required for efficient 60S ribosome subunit biogenesis |
| YGR132C | PHB1 | 0 | 0 | prohibitin, antiproliferative protein |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| Cluster | CZ0070: |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YDL052C | SLC1 | 1 | 0 | fatty acyltransferase |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YDL143W | CCT4 | 0 | 0 | component of chaperonin-containing T-complex |
| YGL238W | CSE1 | 3 | 0 | importin-beta-like protein |
| YDL160C | DHH1 | 13 | 0 | putative RNA helicase of the DEAD box family |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YGL195W | GCN1 | 1 | 1 | translational activator |
| YFR009W | GCN20 | 1 | 1 | positive effector of GCN2P |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YBR205W | KTR3 | 4 | 0 | alpha-1,2-mannosyltransferase |
| YJR077C | MIR1 | 2 | 0 | phosphate transport protein, mitochondrial (MCF) |
| YLR071C | RGR1 | 2 | 0 | DNA-directed RNA polymerase II holoenzyme subunit |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| YFR044C | 0 | 0 | similarity to hypothetical protein YBR281C (Class IV) |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| Cluster | CZ0071: |
| YDR189W | SLY1 | 2 | 0 | hydrophilic suppressor of YPT1 and member of the SEC1P family |
| YGL095C | VPS45 | 3 | 1 | vacuolar protein sorting-associated protein |
| YBL050W | SEC17 | 11 | 3 | transport vesicle fusion protein |
| YDR468C | TLG1 | 7 | 3 | member of the syntaxin family of t-SNAREs |
| YOL018C | TLG2 | 10 | 4 | member of the syntaxin family of t-SNAREs |
| YMR197C | VTI1 | 8 | 4 | v-SNARE: involved in Golgi retrograde protein traffic |
| YKL196C | YKT6 | 4 | 1 | SNARE protein for Endoplasmic Reticulum-Golgi transport |
| Cluster | CZ0072: |
| YPL094C | SEC62 | 3 | 0 | ER protein-translocation complex subunit |
| YBR171W | SEC66 | 3 | 0 | ER protein-translocation complex subunit |
| YEL036C | ANP1 | 4 | 0 | required for protein glycosylation in the golgi |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YDR245W | MNN10 | 0 | 0 | subunit of mannosyltransferase complex |
| YOR254C | SEC63 | 1 | 0 | ER protein-translocation complex subunit |
| YLR292C | SEC72 | 1 | 0 | ER protein-translocation complex subunit |
| Cluster | CZ0073: |
| YER136W | GDI1 | 4 | 0 | GDP dissociation inhibitor |
| YER031C | YPT31 | 7 | 0 | GTP-binding protein of the rab family |
| YFL038C | YPT1 | 10 | 0 | GTP-binding protein of the rab family |
| YKR014C | YPT52 | 4 | 0 | GTP-binding protein of the rab family |
| Cluster | CZ0074: |
| YDR484W | SAC2 | 6 | 1 | suppressor of actin mutation |
| YJL029C | VPS53 | 1 | 1 | subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi |
| YDR027C | LUV1 | 0 | 0 | interacts with the beta-tubulin binding protein RBL2P |
| YKR020W | 1 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0075: |
| YKR068C | BET3 | 9 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YBR254C | TRS20 | 11 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YML077W | BET5 | 10 | 9 | involved in targeting and fusion of ER to golgi transport vesicles |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YDR108W | GSG1 | 10 | 8 | sporulation specific protein |
| YGR166W | KRE11 | 10 | 8 | beta-glucan synthesis-associated protein |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YGR143W | SKN1 | 0 | 0 | glucan synthase subunit |
| YDR407C | TRS120 | 9 | 9 | TRAPP subunit of 120 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YMR218C | TRS130 | 9 | 9 | TRAPP subunit of 130 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR246W | TRS23 | 9 | 9 | TRAPP subunit of 20 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YDR472W | TRS31 | 9 | 9 | TRAPP subunit of 31 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| YOR115C | TRS33 | 10 | 9 | TRAPP subunit of 33 kDa involved in targeting and fusion of ER to golgi transport vesicles |
| Cluster | CZ0076: |
| YNR006W | VPS27 | 1 | 1 | vacuolar protein sorting-associated protein |
| YHL002W | 5 | 1 | weak similarity to mammalian signal transducing adaptor (Class III) |
| Cluster | CZ0077: |
| YLR148W | PEP3 | 3 | 3 | vacuolar membrane protein |
| YDR080W | VPS41 | 1 | 1 | required for the vacuolar assembly |
| YAL002W | VPS8 | 0 | 0 | vacuolar sorting protein, 134 kD |
| Q0080 | AAP1 | 0 | 0 | F1F0-ATPase complex, F0 subunit 8 |
| YDL087C | LUC7 | 1 | 0 | yeast U1 snRNP protein with a role in 5' splice site recognition |
| YMR231W | PEP5 | 4 | 4 | vacuolar biogenesis protein |
| YGR013W | SNU71 | 2 | 0 | associated with U1 snRNP, no counterpart in mammalian U1 snRNP |
| YDL077C | VAM6 | 2 | 2 | vacuolar carboxypeptidase Y |
| YPL045W | VPS16 | 3 | 3 | vacuolar sorting protein |
| YLR396C | VPS33 | 4 | 3 | vacuolar sorting protein |
| Cluster | CZ0078: |
| YBL037W | APL3 | 0 | 0 | AP-2 complex subunit, alpha-adaptin, 113 KD |
| YPL195W | APL5 | 1 | 1 | AP-3 complex subunit, gamma-adaptin, 107 KD |
| YGR261C | APL6 | 1 | 1 | AP-3 complex subunit, beta3-adaptin, 91 KD |
| YBR288C | APM3 | 2 | 1 | AP-3 complex subunit, mu3 subunit, 55 KD |
| YJR005W | APL1 | 3 | 0 | AP-2 complex subunit, beta2-adaptin, 78 KD |
| YOL062C | APM4 | 1 | 0 | AP-2 complex subunit, mu2 subunit, 55 KD |
| YJR058C | APS2 | 2 | 0 | AP-2 complex subunit, sigma2 subunit, 17 KD |
| YJL024C | APS3 | 1 | 1 | AP-3 complex subunit, sigma3 subunit, 22 KD |
| YGL019W | CKB1 | 6 | 0 | casein kinase II, beta subunit |
| Cluster | CZ0079: |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YER122C | GLO3 | 2 | 0 | zinc finger protein |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YBR162C | TOS1 | 6 | 0 | similarity to hypothetical protein YJL171C (Class IV) |
| YER086W | ILV1 | 7 | 0 | anabolic serine and threonine dehydratase precursor |
| YPL010W | RET3 | 0 | 0 | coatomer complex zeta chain |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YMR214W | SCJ1 | 0 | 0 | homolog of E. coli DnaJ, functions in the endoplasmic reticulum by interaction with KAR2P |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YIL076W | SEC28 | 2 | 0 | epsilon-COP coatomer subunit |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YKR067W | GPT2 | 0 | 0 | strong similarity to SCT1P (Class II) |
| Cluster | CZ0080: |
| YML130C | ERO1 | 1 | 0 | required for protein disulfide bond formation in the ER |
| YML067C | ERV41 | 1 | 1 | component of copii vesicles involved in transport between the ER and golgi complex |
| YAL042W | ERV46 | 2 | 1 | component of copii vesicles involved in transport between the ER and golgi complex |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YLR208W | SEC13 | 5 | 0 | protein transport protein |
| Cluster | CZ0081: |
| YBR102C | EXO84 | 2 | 2 | exocyst protein essential for secretion |
| YLR166C | SEC10 | 5 | 2 | required for exocytosis |
| YER008C | SEC3 | 0 | 0 | component of exocyst complex |
| YDR166C | SEC5 | 1 | 1 | required for exocytosis |
| YIL068C | SEC6 | 1 | 0 | protein transport protein |
| YPR055W | SEC8 | 1 | 1 | protein transport protein |
| YML097C | VPS9 | 1 | 0 | vacuolar sorting protein |
| Cluster | CZ0082: |
| YHR108W | GGA2 | 0 | 0 | Arf-binding protein |
| YGL206C | CHC1 | 3 | 0 | clathrin heavy chain |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| Cluster | CZ0083: |
| YGL142C | GPI10 | 0 | 0 | required for Glycosyl Phosphatdyl Inositol synthesis |
| YML012W | ERV25 | 2 | 0 | component of the COPII-coated vesicles, 25 Kda |
| Cluster | CZ0084: |
| YKL135C | APL2 | 7 | 3 | AP-1 complex subunit, beta1-adaptin, 82 KD |
| YPR029C | APL4 | 5 | 3 | AP-1 complex subunit, gamma-adaptin, 94 KD |
| YPL259C | APM1 | 2 | 1 | AP-1 complex subunit, mu1 subunit, 54 KD |
| YHL019C | APM2 | 4 | 2 | involved in clathrin-independent transport processes |
| YLR170C | APS1 | 1 | 1 | AP-1 complex subunit, sigma1 subunit, 18 KD |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| Cluster | CZ0085: |
| YBL087C | RPL23A | 0 | 0 | 60S large subunit ribosomal protein L23.e |
| YDR361C | BCP1 | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YDL171C | GLT1 | 0 | 0 | glutamate synthase (NAPDPH) (GOGAT) |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YER103W | SSA4 | 4 | 0 | heat shock protein of HSP70 family, cytosolic |
| YOL098C | 0 | 0 | similarity to hypothetical S.pombe protein (Class IV) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YPL208W | 3 | 0 | similarity to YHL039W (Class IV) |
| Cluster | CZ0086: |
| YGR204W | ADE3 | 1 | 0 | C1-tetrahydrofolate synthase (trifunctional enzyme),cytoplasmic |
| YNL112W | DBP2 | 1 | 0 | ATP-dependent RNA helicase of DEAD box family |
| YGL099W | KRE35 | 0 | 0 | similarity to putative human GTP-binding protein MMR1 (Class III) |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YOR048C | RAT1 | 0 | 0 | 5'-3' exoribonuclease |
| YBR263W | SHM1 | 1 | 0 | serine hydroxymethyltransferase precursor, mitochondrial |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YPL009C | 0 | 0 | similarity to M.jannaschii hypothetical protein (Class IV) |
| Cluster | CZ0087: |
| YDL216C | RRI1 | 2 | 1 | similarity to Jun activation domain binding protein homologue of A. thaliana (Class III) |
| YDL147W | RPN5 | 6 | 1 | subunit of the regulatory particle of the proteasome |
| YDR179C | 4 | 2 | weak similarity to hypothetical protein D. melanogaster (Class IV) |
| YIL071C | PCI8 | 2 | 1 | hypothetical protein (Class V) |
| YMR025W | 6 | 2 | hypothetical protein (Class V) |
| YOL117W | 1 | 1 | weak similarity to human sodium channel alpha chain HBA (Class III) |
| Cluster | CZ0088: |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YIL035C | CKA1 | 4 | 0 | casein kinase II, catalytic alpha chain |
| YDR211W | GCD6 | 1 | 0 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| Cluster | CZ0089: |
| YNL007C | SIS1 | 1 | 0 | heat shock protein |
| YAL041W | CDC24 | 11 | 0 | GTP/GDP exchange factor for CDC42P |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| Cluster | CZ0090: |
| YDR292C | SRP101 | 2 | 1 | signal recognition particle receptor, alpha chain |
| YKL154W | SRP102 | 2 | 1 | signal recognition particle receptor, beta chain |
| Cluster | CZ0091: |
| YAL005C | SSA1 | 4 | 0 | heat shock protein of HSP70 family, cytosolic |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR151C | RPB2 | 2 | 0 | DNA-directed RNA polymerase II, 140 kDa chain |
| Cluster | CZ0092: |
| YMR028W | TAP42 | 3 | 0 | component of the Tor signaling pathway |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YJL111W | CCT7 | 0 | 0 | component of chaperonin-containing T-complex |
| Cluster | CZ0093: |
| YDL080C | THI3 | 0 | 0 | positive regulation factor of thiamin metabolism |
| YIL142W | CCT2 | 2 | 0 | chaperonin of the TCP1 ring complex, cytosolic |
| YGR196C | FYV8 | 3 | 0 | weak similarity to Tetrahymena acidic repetitive protein ARP1 (Class III) |
| Cluster | CZ0094: |
| YPR066W | UBA3 | 3 | 1 | ubiquitin-like protein activating enzyme |
| YPL003W | ULA1 | 3 | 1 | involved in protein modification |
| Cluster | CZ0095: |
| YBR058C | UBP14 | 7 | 0 | ubiquitin specific protease |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| YMR309C | NIP1 | 7 | 0 | associated with 40s ribosomal subunit |
| Cluster | CZ0096: |
| YMR304W | UBP15 | 0 | 0 | similarity to human ubiquitin-specific protease (Class III) |
| YLR131C | ACE2 | 1 | 0 | metallothionein expression activator |
| YJL095W | BCK1 | 2 | 0 | ser/thr protein kinase of the MEKK family |
| YJR076C | CDC11 | 6 | 0 | septin |
| YLR436C | ECM30 | 1 | 0 | involved in cell wall biogenesis and architecture |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YJL050W | MTR4 | 0 | 0 | involved in nucleocytoplasmic transport of mRNA |
| YOR326W | MYO2 | 2 | 0 | myosin heavy chain |
| YER008C | SEC3 | 0 | 0 | component of exocyst complex |
| YBL044W | 1 | 0 | hypothetical protein (Class V) |
| YDR111C | 1 | 0 | strong similarity to alanine transaminase (Class II) |
| YGR145W | 2 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YJR098C | 0 | 0 | weak similarity to Bacillus licheniformis esterase (Class III) |
| YKR071C | 0 | 0 | weak similarity to C.elegans hypothetical protein (Class IV) |
| YNL313C | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YPR115W | 2 | 0 | similarity to probable transcription factor ASK10P, and to YNL047C and YIL105C (Class III) |
| Cluster | CZ0097: |
| YBL064C | 0 | 0 | strong similarity to thiol-specific antioxidant enzyme (Class II) |
| YDR069C | DOA4 | 2 | 0 | ubiquitin-specific protease |
| Cluster | CZ0098: |
| YBR246W | 1 | 0 | similarity to TREMBL:SPCC18_15 hypothetical protein, S. pombe (Class IV) |
| Cluster | CZ0099: |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YMR309C | NIP1 | 7 | 1 | associated with 40s ribosomal subunit |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YOR361C | PRT1 | 7 | 1 | translation initiation factor eIF3 subunit |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YGR102C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0100: |
| YER168C | CCA1 | 0 | 0 | tRNA nucleotidyltransferase |
| Cluster | CZ0101: |
| YDR155C | CPH1 | 2 | 0 | cyclophilin (peptidylprolyl isomerase) |
| YBR103W | SIF2 | 8 | 1 | SIR4P interacting protein |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YGL194C | HOS2 | 0 | 0 | putative histone deacetylase |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YOR290C | SNF2 | 3 | 0 | component of SWI/SNF global transcription activator complex |
| YCR033W | 1 | 0 | similarity to nuclear receptor co-repressor N-Cor (Class III) |
| YIL112W | 1 | 1 | similarity to ankyrin and coiled-coil proteins (Class III) |
| YKR029C | 1 | 0 | similarity to YJL105W and Lentinula MFBA protein (Class III) |
| Cluster | CZ0102: |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YFL007W | BLM3 | 0 | 0 | weak similarity to Mms19p (Class IV) |
| YGR113W | DAM1 | 13 | 0 | essential mitotic spindle pole protein |
| YLR276C | DBP9 | 1 | 0 | similarity to YDL031W, MAK5P and RNA helicases (Class III) |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YOL108C | INO4 | 5 | 0 | basic helix-loop-helix transcription factor |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YGL197W | MDS3 | 1 | 0 | negative regulator of early meiotic expression |
| YOR373W | NUD1 | 0 | 0 | cell cycle regulatory protein |
| YER178W | PDA1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) alpha chain precursor |
| YBR221C | PDB1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) beta chain precursor |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YER094C | PUP3 | 2 | 0 | 20S proteasome subunit (beta3) |
| YLR071C | RGR1 | 2 | 0 | DNA-directed RNA polymerase II holoenzyme subunit |
| YDR394W | RPT3 | 7 | 1 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 1 | 26S proteasome regulatory subunit |
| YLL021W | SPA2 | 7 | 0 | involved in cell polarity |
| YNL189W | SRP1 | 140 | 1 | karyopherin-alpha or importin |
| YPL020C | ULP1 | 8 | 0 | Ubl-specific protease |
| YFL006W | 0 | 0 | similarity to hypothetical protein TRCDSEMBL:AB024034_15 A. thaliana (Class IV) |
| YGR081C | 1 | 0 | weak similarity to mammalian myosin heavy chain (Class III) |
| YMR310C | 1 | 0 | similarity to YGR283C (Class IV) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | CZ0103: |
| YBR118W | TEF2 | 2 | 1 | translation elongation factor eEF1 alpha-A chain, cytosolic |
| YKL081W | TEF4 | 1 | 1 | translation elongation factor eEF1, gamma chain |
| YPL048W | CAM1 | 0 | 0 | translation elongation factor eEF1 gamma homologue |
| YAL003W | EFB1 | 3 | 2 | translation elongation factor eEF1beta |
| YNL023C | FAP1 | 3 | 0 | similarity to D.melanogaster shuttle craft protein (Class III) |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YER086W | ILV1 | 7 | 0 | anabolic serine and threonine dehydratase precursor |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YIR033W | MGA2 | 0 | 0 | may be involved in the remodeling chromatin structure |
| YPL226W | NEW1 | 0 | 0 | similarity to translation elongation factor eEF3 (Class III) |
| YHL034C | SBP1 | 1 | 0 | single-strand nucleic acid binding protein |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| Cluster | CZ0104: |
| YHL004W | MRP4 | 12 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YBR251W | MRPS5 | 0 | 0 | ribosomal protein S5, mitochondrial |
| YDR036C | 0 | 0 | similarity to enoyl CoA hydratase (Class III) |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YHR059W | FYV4 | 1 | 0 | weak similarity to Ustilago hordei B east mating protein 2 (Class III) |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YDR347W | MRP1 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YGR084C | MRP13 | 2 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YKL003C | MRP17 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YBL090W | MRP21 | 0 | 0 | Mitochondrial ribosomal protein |
| YPL118W | MRP51 | 2 | 0 | mitochondrial ribosomal protein of the small subunit |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YBR146W | MRPS9 | 1 | 0 | ribosomal protein S9 precursor, mitochondrial |
| YNL137C | NAM9 | 0 | 0 | ribosomal protein, mitochondrial |
| YOR158W | PET123 | 5 | 0 | ribosomal protein, mitochondrial |
| YGR170W | PSD2 | 0 | 0 | phosphatidylserine decarboxylase 2 |
| YDR041W | RSM10 | 0 | 0 | component of the mitochondrial ribosomal small subunit |
| YNR037C | RSM19 | 2 | 0 | strong similarity to Mycoplasma ribosomal protein S19 (Class II) |
| YKL155C | RSM22 | 1 | 0 | similarity to S. pombe SPAC1420.04c putative cytochrome c oxidase assembly protein (Class IV) |
| YGL129C | RSM23 | 2 | 0 | similarity to S.pombe hypothetical protein SPBC29A3.15C - putative mitochondrial function (Class IV) |
| YDR175C | RSM24 | 1 | 0 | component of the mitochondrial ribosomal small subunit |
| YIL093C | RSM25 | 0 | 0 | weak similarity to S.pombe hypothetical protein SPBC16A3 (Class IV) |
| YGR215W | RSM27 | 1 | 0 | strong similarity to hypothetical S. pombe protein (Class IV) |
| YJR113C | RSM7 | 2 | 0 | similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7 (Class III) |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YOL115W | TRF4 | 6 | 0 | topoisomerase I-related protein |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YGR150C | 0 | 0 | similarity to PIR:T39838 hypothetical protein SPBC19G7.07c S. pombe (Class IV) |
| YMR158W | 0 | 0 | weak similarity to E.coli ribosomal S8 protein (Class III) |
| YMR188C | 0 | 0 | weak similarity to bacterial ribosomal protein S17 (Class III) |
| YNL306W | MRPS18 | 0 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YOR205C | 0 | 0 | hypothetical protein (Class V) |
| YOR243C | 0 | 0 | similarity to M.jannaschii hypothetical protein MJ0588 (Class IV) |
| YPL013C | 3 | 0 | strong similarity to N.crassa mitochondrial ribosomal protein S24 (Class II) |
| Cluster | CZ0105: |
| YOR260W | GCD1 | 3 | 1 | translation initiation factor eIF2bgamma subunit |
| YDR211W | GCD6 | 1 | 1 | translation initiation factor eIF2b epsilon, 81 kDa subunit |
| YKR026C | GCN3 | 15 | 1 | translation initiation factor eIF2B, 34 KD, alpha subunit |
| YNL265C | IST1 | 0 | 0 | similarity to NUF1P, has a role in resistance to high concentrations of sodium (Class IV) |
| YDL143W | CCT4 | 0 | 0 | component of chaperonin-containing T-complex |
| YGL206C | CHC1 | 3 | 0 | clathrin heavy chain |
| YER025W | GCD11 | 1 | 1 | translation initiation factor eIF2 gamma chain |
| YGR083C | GCD2 | 1 | 1 | translation initiation factor eIF2B, 71 kDa (delta) subunit |
| YLR291C | GCD7 | 23 | 2 | translation initiation factor eIF2b, 43 kDa subunit |
| YHL032C | GUT1 | 0 | 0 | glycerol kinase |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YDR300C | PRO1 | 1 | 0 | glutamate 5-kinase |
| YOL142W | RRP40 | 1 | 1 | protein involved in ribosomal RNA processing, component of the exosome complex responsible for 3' end processing and degradation of many RNA species |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YGR194C | XKS1 | 0 | 0 | xylulokinase |
| YML071C | 0 | 0 | weak similarity to unnamed ORF Mus musculus brain cDNA (Class IV) |
| Cluster | CZ0106: |
| YAR014C | BUD14 | 2 | 0 | similarity to hypothetical protein S.pombe (Class IV) |
| YBR158W | CST13 | 1 | 0 | weak similarity to TRCDSEMBL:AF176518_1 F-box protein FBL2; human (Class IV) |
| YAR018C | KIN3 | 4 | 0 | ser/thr protein kinase |
| YGR285C | ZUO1 | 2 | 0 | zuotin, a putative Z-DNA binding protein |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YPR189W | SKI3 | 0 | 0 | antiviral protein |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| Cluster | CZ0107: |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YOR361C | PRT1 | 7 | 6 | translation initiation factor eIF3 subunit |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YPR086W | SUA7 | 100 | 0 | TFIIB subunit (transcription initiation factor), factor E |
| YPR041W | TIF5 | 3 | 2 | translation initiation factor eIF5 |
| YDL149W | APG9 | 1 | 0 | integral membrane protein required for Cvt and autophagy transport |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YDL171C | GLT1 | 0 | 0 | glutamate synthase (NAPDPH) (GOGAT) |
| YBR086C | IST2 | 0 | 0 | weak similarity to calcium and sodium channel proteins (Class III) |
| YGL099W | KRE35 | 0 | 0 | similarity to putative human GTP-binding protein MMR1 (Class III) |
| YNL029C | KTR5 | 0 | 0 | putative mannosyltransferase |
| YGL036W | MTC2 | 1 | 0 | similarity to EDE1P (Class IV) |
| YMR309C | NIP1 | 7 | 5 | associated with 40s ribosomal subunit |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YLR039C | RIC1 | 0 | 0 | involved in transcription of ribosomal proteins and ribosomal RNA |
| YDR091C | RLI1 | 3 | 0 | strong similarity to human RNase L inhibitor and M.jannaschii ABC transporter protein (Class II) |
| YML010W | SPT5 | 0 | 0 | transcription elongation protein |
| YNL244C | SUI1 | 3 | 2 | translation initiation factor 3 (eIF3) |
| YJR007W | SUI2 | 1 | 0 | translation initiation factor eIF2, alpha chain |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YBR143C | SUP45 | 4 | 0 | translational release factor |
| YMR146C | TIF34 | 4 | 3 | translation initiation factor eIF3, p39 subunit |
| YDR429C | TIF35 | 6 | 2 | translation initiation factor eIF3 (p33 subunit) |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| Cluster | CZ0108: |
| YNL284C | MRPL10 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YBL038W | MRPL16 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YNL185C | MRPL19 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YGR220C | MRPL9 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YCL014W | BUD3 | 2 | 0 | budding protein |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YJL005W | CYR1 | 1 | 0 | adenylate cyclase |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YCR046C | IMG1 | 1 | 0 | ribosomal protein, mitochondrial |
| YCR071C | IMG2 | 0 | 0 | required for Integrity of Mitochondrial Genome |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YDR296W | MHR1 | 0 | 0 | Involved in mitochondrial homologous DNA recombination |
| YDR405W | MRP20 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YKL167C | MRP49 | 0 | 0 | ribosomal protein, mitochondrial |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YKR006C | MRPL13 | 1 | 0 | ribosomal protein YmL13, mitochondrial |
| YNL252C | MRPL17 | 3 | 0 | ribosomal protein of the large subunit (YmL30), mitochondrial |
| YKR085C | MRPL20 | 0 | 0 | ribosomal protein YmL20, mitochondrial |
| YOR150W | MRPL23 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR193W | MRPL24 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YGR076C | MRPL25 | 0 | 0 | ribosomal protein YmL25, mitochondrial |
| YBR282W | MRPL27 | 1 | 0 | ribosomal protein YmL27 precursor, mitochondrial |
| YDR462W | MRPL28 | 0 | 0 | ribosomal protein of the large subunit (YmL28), mitochondrial |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YBR122C | MRPL36 | 2 | 0 | ribosomal protein YmL36 precursor, mitochondrial |
| YML009C | MRPL39 | 0 | 0 | 60S ribosomal protein, mitochondrial |
| YLR439W | MRPL4 | 1 | 0 | ribosomal protein, mitochondrial |
| YMR225C | MRPL44 | 0 | 0 | ribosomal protein YMR44, mitochondrial |
| YHR147C | MRPL6 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR237W | MRPL7 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YOR201C | PET56 | 0 | 0 | rRNA (guanosine-2'-O-)-methyltransferase |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YFR051C | RET2 | 2 | 1 | coatomer complex delta chain |
| YLR371W | ROM2 | 2 | 0 | GDP/GTP exchange factor for RHO1P |
| YDR164C | SEC1 | 2 | 0 | protein transport protein |
| YDR238C | SEC26 | 1 | 1 | coatomer complex beta chain of secretory pathway vesicles |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YNL236W | SIN4 | 12 | 0 | global regulator protein |
| YOR290C | SNF2 | 3 | 1 | component of SWI/SNF global transcription activator complex |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YBR198C | TAF90 | 16 | 0 | TFIID and SAGA subunit |
| YLR189C | UGT51 | 0 | 0 | sterol glucosyltransferase (UDP-glucose:sterol glucosyltransferase) |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YCR030C | 5 | 0 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 (Class IV) |
| YDR115W | 4 | 0 | similarity to bacterial ribosomal L34 proteins (Class III) |
| YDR116C | 1 | 0 | similarity to bacterial ribosomal L1 proteins (Class III) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGL064C | 0 | 0 | similarity to YLR276C and YKR024C (Class IV) |
| YML025C | YML6 | 0 | 0 | ribosomal protein, mitochondrial |
| YPR100W | 0 | 0 | weak similarity to C.elegans hypothetical protein CEC25A1 (Class IV) |
| Cluster | CZ0109: |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YNL207W | 1 | 0 | similarity to M.jannaschii hypothetical protein MJ1073 (Class IV) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YPL266W | DIM1 | 1 | 0 | rRNA (adenine-N6,N6-)-dimethyltransferase |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YLR186W | EMG1 | 0 | 0 | strong similarity to S.pombe hypothetical protein C18G6.07C (Class IV) |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YHR148W | IMP3 | 3 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YNL075W | IMP4 | 1 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YER082C | KRE31 | 2 | 0 | similarity to M.sexta steroid regulated MNG10 protein (Class III) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YKL143W | LTV1 | 5 | 0 | low-temperature viability protein |
| YJR002W | MPP10 | 3 | 2 | component of the U3 small nucleolar ribonucleoprotein |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YOR290C | SNF2 | 3 | 1 | component of SWI/SNF global transcription activator complex |
| YBR289W | SNF5 | 1 | 0 | component of SWI/SNF transcription activator complex |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR054W | 1 | 0 | similarity to C.elegans E04D5.1 protein (Class IV) |
| YGR081C | 1 | 0 | weak similarity to mammalian myosin heavy chain (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YMR093W | 2 | 0 | weak similarity to PWP2P (Class III) |
| YOR145C | 1 | 0 | strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein (Class IV) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YPR144C | 1 | 0 | similarity to YDR060W and C.elegans hypothetical protein (Class IV) |
| Cluster | CZ0110: |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YFR010W | UBP6 | 0 | 0 | ubiquitin-specific protease |
| YJL194W | CDC6 | 2 | 0 | cell division control protein |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YLR035C | MLH2 | 4 | 0 | similarity to human mutL protein homolog, mouse PMS2, MLH1P and PMS1P (Class III) |
| YGR232W | NAS6 | 3 | 1 | possible homolog of human 26S proteasome regulatory subunit p28 |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YER094C | PUP3 | 2 | 0 | 20S proteasome subunit (beta3) |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YLR421C | RPN13 | 1 | 0 | weak similarity to human 42K membrane glycoprotein (Class III) |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 3 | 26S proteasome regulatory subunit |
| YOR259C | RPT4 | 3 | 3 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 1 | 26S proteasome regulatory subunit |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| Cluster | CZ0111: |
| YFR004W | RPN11 | 3 | 1 | 26S proteasome regulatory subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YDL147W | RPN5 | 6 | 0 | subunit of the regulatory particle of the proteasome |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR261C | RPN8 | 1 | 1 | 26S proteasome regulatory subunit |
| YKL145W | RPT1 | 1 | 0 | 26S proteasome regulatory subunit |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YFR010W | UBP6 | 0 | 0 | ubiquitin-specific protease |
| YFL007W | BLM3 | 0 | 0 | weak similarity to Mms19p (Class IV) |
| YJL194W | CDC6 | 2 | 0 | cell division control protein |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR035C | MLH2 | 4 | 0 | similarity to human mutL protein homolog, mouse PMS2, MLH1P and PMS1P (Class III) |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YJL001W | PRE3 | 3 | 0 | 20S proteasome subunit (beta1) |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YER094C | PUP3 | 2 | 0 | 20S proteasome subunit (beta3) |
| YLR071C | RGR1 | 2 | 0 | DNA-directed RNA polymerase II holoenzyme subunit |
| YLR421C | RPN13 | 1 | 0 | weak similarity to human 42K membrane glycoprotein (Class III) |
| YER021W | RPN3 | 2 | 1 | 26S proteasome regulatory subunit |
| YPR108W | RPN7 | 1 | 1 | subunit of the regulatory particle of the proteasome |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 2 | 26S proteasome regulatory subunit |
| YOR259C | RPT4 | 3 | 3 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 2 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 1 | 26S proteasome regulatory subunit |
| YFL006W | 0 | 0 | similarity to hypothetical protein TRCDSEMBL:AB024034_15 A. thaliana (Class IV) |
| Cluster | CZ0112: |
| YDR021W | FAL1 | 1 | 0 | involved in maturation of 18S rRNA |
| YNL271C | BNI1 | 8 | 0 | regulator of budding |
| Cluster | CZ0113: |
| YLR060W | FRS1 | 0 | 0 | phenylalanyl-tRNA synthetase, alpha subunit, cytosolic |
| YFL022C | FRS2 | 2 | 0 | phenylalanine--tRNA ligase beta chain, cytosolic |
| Cluster | CZ0114: |
| YPR180W | AOS1 | 4 | 1 | forms together with UBA2P a heterodimeric activating enzyme for SMT3P |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YDR390C | UBA2 | 3 | 1 | E1-like (ubiquitin-activating) enzyme |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| Cluster | CZ0115: |
| YOL123W | HRP1 | 5 | 0 | CF Ib (RNA3' Cleavage factor Ib) |
| YMR064W | AEP1 | 1 | 0 | nuclear control of ATPase messenger RNA expression protein |
| YMR282C | AEP2 | 0 | 0 | required for the expression of subunit-9 of atp synthase |
| YDR023W | SES1 | 1 | 0 | seryl-tRNA synthetase, cytosolic |
| YDR350C | TCM10 | 1 | 0 | hypothetical protein (Class V) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| Cluster | CZ0116: |
| YER036C | KRE30 | 3 | 0 | strong similarity to members of the ABC transporter family (Class II) |
| YPR036W | VMA13 | 0 | 0 | H+-ATPase V1 domain 54 KD subunit, vacuolar |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| Cluster | CZ0117: |
| YPR051W | MAK3 | 1 | 1 | N-acetyltransferase |
| YEL053C | MAK10 | 2 | 1 | glucose-repressible protein |
| Cluster | CZ0118: |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YML105C | SEC65 | 3 | 0 | signal recognition particle subunit |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YDL092W | SRP14 | 1 | 1 | signal recognition particle subunit |
| YKL122C | SRP21 | 1 | 1 | signal recognition particle subunit |
| YPL243W | SRP68 | 0 | 0 | signal recognition particle protein |
| YPL210C | SRP72 | 0 | 0 | signal recognition particle protein |
| Cluster | CZ0119: |
| YBR069C | TAT1 | 1 | 0 | amino acid permease |
| YGR218W | CRM1 | 38 | 0 | nuclear export factor, exportin |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YJR077C | MIR1 | 2 | 0 | phosphate transport protein, mitochondrial (MCF) |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YDL043C | PRP11 | 21 | 0 | pre-mRNA splicing factor |
| YNL064C | YDJ1 | 2 | 0 | mitochondrial and ER import protein |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| YPL233W | 1 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| Cluster | CZ0120: |
| YAL061W | FUN50 | 0 | 0 | similarity to alcohol/sorbitol dehydrogenase (Class III) |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| Cluster | CZ0121: |
| YDL100C | 25 | 0 | similarity to E.coli arsenical pump-driving ATPase (Class III) |
| YBL076C | ILS1 | 0 | 0 | isoleucyl-tRNA synthetase |
| Cluster | CZ0122: |
| YNR007C | AUT1 | 5 | 0 | essential for autophagocytosis |
| YOR160W | MTR10 | 5 | 0 | involved in nuclear protein import |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| Cluster | CZ0123: |
| YBR017C | KAP104 | 10 | 2 | beta-karyopherin |
| YDR062W | LCB2 | 0 | 0 | serine C-palmitoyltransferase subunit |
| YER177W | BMH1 | 1 | 0 | 14-3-3 protein involved in rapamycin-sensitive signalling |
| YDR099W | BMH2 | 5 | 0 | suppressor of clathrin deficiency |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YGR218W | CRM1 | 38 | 0 | nuclear export factor, exportin |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR342W | FKS1 | 1 | 0 | 1,3-beta-D-glucan synthase, catalytic subunit |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YEL022W | GEA2 | 0 | 0 | GDP/GTP exchange factor for ARF |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YOL123W | HRP1 | 5 | 2 | CF Ib (RNA3' Cleavage factor Ib) |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YMR296C | LCB1 | 2 | 0 | serine C-palmitoyltransferase subunit |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YJR077C | MIR1 | 2 | 0 | phosphate transport protein, mitochondrial (MCF) |
| YGL122C | NAB2 | 8 | 2 | nuclear poly(A)-binding protein |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YDR502C | SAM2 | 2 | 0 | S-adenosylmethionine synthetase 2 |
| YHR020W | 0 | 0 | strong similarity to human glutamyl-prolyl-tRNA synthetase and fruit fly multifunctional aminoacyl-tRNA synthetase (Class II) |
| Cluster | CZ0124: |
| YLR208W | SEC13 | 5 | 2 | protein transport protein |
| YDL195W | SEC31 | 4 | 3 | component of the COPII coat of ER-golgi vesicles |
| YIL035C | CKA1 | 4 | 2 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 2 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YNL112W | DBP2 | 1 | 0 | ATP-dependent RNA helicase of DEAD box family |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YKL057C | NUP120 | 6 | 1 | nuclear pore protein |
| YGL092W | NUP145 | 10 | 3 | nuclear pore protein |
| YDL116W | NUP84 | 19 | 1 | nuclear pore protein |
| YJR042W | NUP85 | 0 | 0 | nuclear pore protein |
| YDR382W | RPP2B | 4 | 0 | 60S large subunit acidic ribosomal protein |
| YPL085W | SEC16 | 3 | 2 | multidomain vesicle coat protein |
| YPR181C | SEC23 | 9 | 2 | component of COPII coat of ER-golgi vesicles |
| YGL100W | SEH1 | 1 | 0 | nuclear pore protein |
| YLR150W | STM1 | 2 | 0 | specific affinity for guanine-rich quadruplex nucleic acids |
| Cluster | CZ0125: |
| YJL033W | HCA4 | 0 | 0 | can suppress the U14 snoRNA rRNA processing function |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YMR300C | ADE4 | 0 | 0 | amidophosphoribosyltransferase |
| YDR299W | BFR2 | 2 | 1 | involved in protein transport steps at the Brefeldin A blocks |
| YPL217C | BMS1 | 0 | 0 | similarity to human hypothetical protein KIAA0187 (Class IV) |
| YOR078W | BUD21 | 3 | 0 | weak similarity to YMR172W (Class IV) |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YLR115W | CFT2 | 6 | 4 | cleavage and polyadenylation specificity factor, part of CF II |
| YLR129W | DIP2 | 0 | 0 | DOM34P-interacting protein |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR186W | EMG1 | 0 | 0 | strong similarity to S.pombe hypothetical protein C18G6.07C (Class IV) |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YML130C | ERO1 | 1 | 0 | required for protein disulfide bond formation in the ER |
| YJR093C | FIP1 | 10 | 6 | component of pre-mRNA polyadenylation factor PF I |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YKL101W | HSL1 | 2 | 0 | ser/thr protein kinase, coupling septin ring assembly to cell cycle progression |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YHR148W | IMP3 | 3 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YNL075W | IMP4 | 1 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YER082C | KRE31 | 2 | 0 | similarity to M.sexta steroid regulated MNG10 protein (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YJR002W | MPP10 | 3 | 2 | component of the U3 small nucleolar ribonucleoprotein |
| YNR043W | MVD1 | 0 | 0 | mevalonate pyrophosphate decarboxylase |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YKR002W | PAP1 | 10 | 5 | poly(A) polymerase |
| YNL317W | PFS2 | 6 | 4 | polyadenylation factor I subunit 2 required for mRNA 3'-end processing, bridges two mRNA 3'-end processing factors |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YAL043C | PTA1 | 8 | 4 | pre-tRNA processing protein / PF I subunit |
| YDR195W | REF2 | 2 | 1 | RNA 3'-end formation protein |
| YEL050C | RML2 | 0 | 0 | ribosomal L2 protein, mitochondrial |
| YMR061W | RNA14 | 8 | 2 | component of pre-mRNA 3'-end processing factor CF I |
| YGL171W | ROK1 | 1 | 0 | ATP-dependent RNA helicase |
| YDR382W | RPP2B | 4 | 0 | 60S large subunit acidic ribosomal protein |
| YPR137W | RRP9 | 0 | 0 | protein associated with the U3 small nucleolar RNA, required for pre-ribosomal RNA processing |
| YGL252C | RTG2 | 0 | 0 | retrograde regulation protein |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| YDR365C | 1 | 0 | weak similarity to Streptococcus M protein (Class III) |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YGR128C | 0 | 0 | hypothetical protein (Class V) |
| YGR145W | 2 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YGR156W | PTI1 | 1 | 0 | weak similarity to PIR:A40220 cleavage stimulation factor 64K chain - human (Class IV) |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YKL099C | 0 | 0 | similarity to C.elegans hypothetical proteins C18G6.06 and C16C10.2 (Class IV) |
| YKR060W | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YLR222C | CST29 | 4 | 0 | similarity to DIP2P (Class III) |
| YLR409C | 1 | 1 | strong similarity to S. pombe beta-transducin (Class II) |
| YMR093W | 2 | 0 | weak similarity to PWP2P (Class III) |
| YNR054C | 0 | 0 | similarity to C.elegans hypothetical protein CEESL47F (Class IV) |
| YPR144C | 1 | 0 | similarity to YDR060W and C.elegans hypothetical protein (Class IV) |
| YLR277C | YSH1 | 10 | 5 | component of pre-mRNA polyadenylation factor PF I |
| Cluster | CZ0126: |
| YJL041W | NSP1 | 7 | 2 | nuclear pore protein |
| YMR047C | NUP116 | 127 | 1 | nuclear pore protein |
| YJL061W | NUP82 | 6 | 2 | nuclear pore protein |
| YMR193W | MRPL24 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YFR002W | NIC96 | 7 | 1 | nuclear pore protein |
| YIL115C | NUP159 | 4 | 0 | nuclear pore protein |
| YDR116C | 1 | 0 | similarity to bacterial ribosomal L1 proteins (Class III) |
| YML025C | YML6 | 0 | 0 | ribosomal protein, mitochondrial |
| Cluster | CZ0127: |
| YLR163C | MAS1 | 0 | 0 | mitochondrial processing peptidase |
| YOL021C | DIS3 | 5 | 1 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YHR024C | MAS2 | 0 | 0 | processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial |
| YHR069C | RRP4 | 4 | 1 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YLR086W | SMC4 | 0 | 0 | Stable Maintenance of Chromosomes |
| Cluster | CZ0128: |
| YAL010C | MDM10 | 0 | 0 | involved in mitochondrial morphology and inheritance |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YMR203W | TOM40 | 8 | 0 | forms the hydrophilic channel of the mitochondrial import pore for preproteins |
| YJL066C | MPM1 | 1 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0129: |
| YJL050W | MTR4 | 0 | 0 | involved in nucleocytoplasmic transport of mRNA |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YPL190C | NAB3 | 1 | 0 | polyadenylated RNA-binding protein |
| Cluster | CZ0130: |
| YIR001C | SGN1 | 2 | 1 | similarity to D.melanogaster RNA binding protein (Class III) |
| YNL138W | SRV2 | 3 | 0 | adenylate cyclase-associated protein, 70kDa |
| YGR192C | TDH3 | 1 | 0 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YGR250C | 3 | 1 | weak similarity to human cleavage stimulation factor 64K chain (Class III) |
| Cluster | CZ0131: |
| YBL051C | PIN4 | 4 | 0 | similarity to S.pombe Z66568_C protein (Class IV) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| Cluster | CZ0132: |
| YBR101C | 11 | 0 | weak similarity to S.pombe hypothetical protein SPBC3B9.01 (Class IV) |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| Cluster | CZ0133: |
| YLL013C | PUF3 | 2 | 0 | transcript-specific regulator of mRNA degradation |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| YHR121W | 2 | 0 | weak similarity to C.elegans hypothetical protein (Class IV) |
| Cluster | CZ0134: |
| YOR326W | MYO2 | 2 | 2 | myosin heavy chain |
| YGR195W | SKI6 | 6 | 5 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YBR109C | CMD1 | 8 | 1 | calmodulin |
| YNL232W | CSL4 | 0 | 0 | core component of the 3'-5' exosome |
| YOL145C | CTR9 | 2 | 0 | required for G1 cyclin expression |
| YOL021C | DIS3 | 5 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YGL106W | MLC1 | 2 | 1 | MYO2P light chain |
| YGR158C | MTR3 | 5 | 1 | involved in mRNA transport |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YHR069C | RRP4 | 4 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YOL142W | RRP40 | 1 | 0 | protein involved in ribosomal RNA processing, component of the exosome complex responsible for 3' end processing and degradation of many RNA species |
| YDL111C | RRP42 | 5 | 5 | rRNA processing protein |
| YCR035C | RRP43 | 6 | 4 | rRNA processing protein |
| YDR280W | RRP45 | 1 | 1 | rRNA processing protein |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YOR001W | RRP6 | 1 | 0 | similarity to human nucleolar 100K polymyositis-scleroderma protein (Class III) |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YOR035C | SHE4 | 3 | 0 | required for mother cell-specific gene expression |
| YOR076C | SKI7 | 3 | 0 | GTPase with function in 3'-to-5' degradation of mRNA |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| Cluster | CZ0135: |
| YGL130W | CEG1 | 2 | 1 | mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit) |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YPL228W | CET1 | 1 | 1 | RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YOL145C | CTR9 | 2 | 0 | required for G1 cyclin expression |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YMR309C | NIP1 | 7 | 1 | associated with 40s ribosomal subunit |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YBR221C | PDB1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) beta chain precursor |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YBR079C | RPG1 | 2 | 1 | translation initiation factor eIF3 (p110 subunit) |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YBL075C | SSA3 | 1 | 0 | heat shock protein of HSP70 family, cytosolic |
| YER103W | SSA4 | 4 | 0 | heat shock protein of HSP70 family, cytosolic |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YHR121W | 2 | 0 | weak similarity to C.elegans hypothetical protein (Class IV) |
| YOL078W | 0 | 0 | similarity to stress activated MAP kinase interacting protein S. pombe (Class III) |
| Cluster | CZ0136: |
| YBR233W | PBP2 | 2 | 0 | PAB1 binding protein |
| YAL027W | 0 | 0 | hypothetical protein (Class V) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YDR507C | GIN4 | 6 | 0 | ser/thr protein kinase |
| YDR174W | HMO1 | 9 | 0 | Non-histone protein |
| YCL024W | KCC4 | 1 | 0 | kinase coordinate cell cycle progression with the organization of the peripheralcytoskeleton |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YBR196C | PGI1 | 1 | 0 | glucose-6-phosphate isomerase |
| YPL022W | RAD1 | 2 | 1 | component of the nucleotide excision repairosome |
| YML095C | RAD10 | 4 | 1 | DNA repair protein |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | CZ0137: |
| YJR014W | 0 | 0 | strong similarity to S.pombe hypothetical protein SPBC16C6.05 (Class IV) |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YKL028W | TFA1 | 3 | 0 | TFIIE subunit (transcription initiation factor), 66 kD |
| Cluster | CZ0138: |
| YJL124C | LSM1 | 10 | 6 | Sm-like (Lsm) protein |
| YBL026W | LSM2 | 15 | 8 | Sm-like (Lsm) protein |
| YER146W | LSM5 | 10 | 6 | Sm-like (Lsm) protein |
| YNL147W | LSM7 | 10 | 6 | Sm-like (Lsm) protein |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| YNL118C | DCP2 | 5 | 1 | suppressor protein of a yeast pet mutant |
| YDL160C | DHH1 | 13 | 2 | putative RNA helicase of the DEAD box family |
| YPR082C | DIB1 | 1 | 1 | required for mitosis |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YDR037W | KRS1 | 0 | 0 | lysyl-tRNA synthetase, cytosolic |
| YER112W | LSM4 | 14 | 6 | Sm-like (Lsm) protein |
| YDR378C | LSM6 | 13 | 6 | Sm-like (Lsm) protein |
| YMR080C | NAM7 | 9 | 1 | nonsense-mediated mRNA decay protein |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YCR077C | PAT1 | 20 | 7 | topoisomerase II-associated protein |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YGR075C | PRP38 | 2 | 1 | pre-mRNA splicing factor |
| YPR178W | PRP4 | 4 | 1 | U4/U6 snRNP 52 KD protein |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YBR055C | PRP6 | 3 | 1 | snRNP(U4/U6)-associated splicing factor |
| YER029C | SMB1 | 8 | 1 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YLR275W | SMD2 | 2 | 1 | U1 snRNP protein of the Sm class |
| YKL173W | SNU114 | 2 | 0 | U5 snRNP-specific protein |
| YDL098C | SNU23 | 2 | 1 | Putative RNA binding zinc finger protein |
| YOR308C | SNU66 | 3 | 1 | component of U4/U6.U5 snRNP |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGL128C | 0 | 0 | weak similarity to dnaJ proteins (Class III) |
| YLR424W | 12 | 0 | weak similarity to STU1P (Class III) |
| YNL224C | 0 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YNR053C | 6 | 1 | strong similarity to human breast tumor associated autoantigen (Class II) |
| Cluster | CZ0139: |
| YPL178W | CBC2 | 3 | 2 | small subunit of the nuclear cap-binding protein complex CBC |
| YBR119W | MUD1 | 7 | 0 | U1 snRNP-specific A protein |
| YAR002W | NUP60 | 0 | 0 | peroxisomal matrix protein import |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YLR226W | BUR2 | 2 | 1 | divergent CDK-cyclin complex |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YDL087C | LUC7 | 1 | 0 | yeast U1 snRNP protein with a role in 5' splice site recognition |
| YFL003C | MSH4 | 1 | 0 | meiosis-specific protein |
| YPL190C | NAB3 | 1 | 0 | polyadenylated RNA-binding protein |
| YHR086W | NAM8 | 0 | 0 | meiotic recombination protein |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YNL251C | NRD1 | 0 | 0 | involved in regulation of nuclear pre-mRNA abundance |
| YML046W | PRP39 | 2 | 0 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 1 | splicing factor |
| YDR235W | PRP42 | 0 | 0 | U1 snRNP associated protein, required for pre-mRNA splicing |
| YNL139C | RLR1 | 0 | 0 | regulatory protein |
| YML049C | RSE1 | 2 | 0 | involved in RNA splicing and ER to Golgi transport |
| YJL080C | SCP160 | 0 | 0 | required for maintenance of exact ploidy |
| YLR430W | SEN1 | 1 | 1 | positive effector of tRNA-splicing endonuclease |
| YPR161C | SGV1 | 1 | 1 | ser/thr protein kinase |
| YGR074W | SMD1 | 10 | 0 | snRNA-associated protein |
| YLR275W | SMD2 | 2 | 0 | U1 snRNP protein of the Sm class |
| YLR147C | SMD3 | 16 | 1 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YDR240C | SNU56 | 0 | 0 | U1 snRNA protein, no counterpart in mammalian snRNP |
| YGR013W | SNU71 | 2 | 1 | associated with U1 snRNP, no counterpart in mammalian U1 snRNP |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YNL189W | SRP1 | 140 | 2 | karyopherin-alpha or importin |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YDL175C | 2 | 0 | weak similarity to cellular nucleic acid binding proteins (Class III) |
| YKL214C | 0 | 0 | weak similarity to mouse transcriptional coactivator ALY (Class III) |
| YML117W | 0 | 0 | similarity to YPL184C (Class IV) |
| Cluster | CZ0140: |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YHR089C | GAR1 | 5 | 1 | nucleolar rRNA processing protein |
| YDL208W | NHP2 | 4 | 1 | nucleolar rRNA processing protein |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YLR276C | DBP9 | 1 | 0 | similarity to YDL031W, MAK5P and RNA helicases (Class III) |
| YLL008W | DRS1 | 0 | 0 | RNA helicase of the DEAD box family |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YMR290C | HAS1 | 2 | 0 | helicase associated with SET1P |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YMR309C | NIP1 | 7 | 0 | associated with 40s ribosomal subunit |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YPR178W | PRP4 | 4 | 1 | U4/U6 snRNP 52 KD protein |
| YNL002C | RLP7 | 0 | 0 | strong similarity to mammalian ribosomal L7 proteins (Class II) |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YER029C | SMB1 | 8 | 0 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YKL173W | SNU114 | 2 | 0 | U5 snRNP-specific protein |
| YOR308C | SNU66 | 3 | 1 | component of U4/U6.U5 snRNP |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDR060W | MAK21 | 1 | 0 | protein required for 60S ribosomal subunit biogenesis |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YKL014C | 0 | 0 | similarity to hypothetical protein SPCC14G10.02 S. pombe (Class IV) |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YLR409C | 1 | 0 | strong similarity to S. pombe beta-transducin (Class II) |
| YMR310C | 1 | 0 | similarity to YGR283C (Class IV) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| Cluster | CZ0141: |
| YNL232W | CSL4 | 0 | 0 | core component of the 3'-5' exosome |
| YOL021C | DIS3 | 5 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YDR280W | RRP45 | 1 | 1 | rRNA processing protein |
| YGR095C | RRP46 | 0 | 0 | involved in rRNA processing |
| YGR195W | SKI6 | 6 | 5 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YGR158C | MTR3 | 5 | 1 | involved in mRNA transport |
| YHR069C | RRP4 | 4 | 4 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YOL142W | RRP40 | 1 | 0 | protein involved in ribosomal RNA processing, component of the exosome complex responsible for 3' end processing and degradation of many RNA species |
| YDL111C | RRP42 | 5 | 5 | rRNA processing protein |
| YCR035C | RRP43 | 6 | 4 | rRNA processing protein |
| YOR001W | RRP6 | 1 | 0 | similarity to human nucleolar 100K polymyositis-scleroderma protein (Class III) |
| YLR398C | SKI2 | 0 | 0 | antiviral protein and putative helicase |
| YPR189W | SKI3 | 0 | 0 | antiviral protein |
| YOR076C | SKI7 | 3 | 0 | GTPase with function in 3'-to-5' degradation of mRNA |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YHR081W | 1 | 0 | weak similarity to human C1D protein (Class III) |
| YIR035C | 1 | 0 | similarity to human corticosteroid 11-beta-dehydrogenase (Class III) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| Cluster | CZ0142: |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| YJL138C | TIF2 | 2 | 1 | translation initiation factor eIF4A |
| YGR162W | TIF4631 | 6 | 2 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YBL032W | 2 | 0 | weak similarity to hnRNP complex protein homolog YBR233W (Class III) |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YNL112W | DBP2 | 1 | 0 | ATP-dependent RNA helicase of DEAD box family |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YNL005C | MRP7 | 1 | 0 | ribosomal protein YmL2 precursor, mitochondrial |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YLR371W | ROM2 | 2 | 0 | GDP/GTP exchange factor for RHO1P |
| YHL034C | SBP1 | 1 | 0 | single-strand nucleic acid binding protein |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YCL037C | SRO9 | 0 | 0 | La motif-containing proteins that modulate mRNA translation |
| YLR150W | STM1 | 2 | 0 | specific affinity for guanine-rich quadruplex nucleic acids |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YGL049C | TIF4632 | 3 | 1 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YAL036C | FUN11 | 5 | 0 | strong similarity to GTP-binding proteins (Class II) |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YML117W | 0 | 0 | similarity to YPL184C (Class IV) |
| YMR310C | 1 | 0 | similarity to YGR283C (Class IV) |
| YOR243C | 0 | 0 | similarity to M.jannaschii hypothetical protein MJ0588 (Class IV) |
| Cluster | CZ0143: |
| YMR213W | CEF1 | 2 | 1 | required during G2/M transition |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| YBR065C | ECM2 | 1 | 0 | involved in cell wall biogenesis and architecture |
| YAL032C | PRP45 | 7 | 2 | pre-mRNA splicing factor |
| YPL151C | PRP46 | 4 | 1 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YKL095W | YJU2 | 2 | 1 | similarity to C.elegans hypothetical proteins (Class IV) |
| YDR364C | CDC40 | 0 | 0 | cell division control protein |
| YMR288W | HSH155 | 0 | 0 | component of a multiprotein splicing factor |
| YJR050W | ISY1 | 3 | 1 | pre-mRNA splicing factor |
| YPL213W | LEA1 | 2 | 0 | U2 A' snRNP protein |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YNR011C | PRP2 | 1 | 0 | RNA-dependent ATPase of DEAH box family |
| YJL203W | PRP21 | 14 | 0 | pre-mRNA splicing factor |
| YER013W | PRP22 | 1 | 0 | pre-mRNA splicing factor |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YML049C | RSE1 | 2 | 0 | involved in RNA splicing and ER to Golgi transport |
| YLR275W | SMD2 | 2 | 0 | U1 snRNP protein of the Sm class |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YKL173W | SNU114 | 2 | 0 | U5 snRNP-specific protein |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YDR416W | SYF1 | 10 | 4 | synthetic lethal with CDC40 |
| YCR063W | BUD31 | 1 | 0 | strong similarity to Xenopus G10 and human edg-2 protein (Class II) |
| YDL209C | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YGL128C | 0 | 0 | weak similarity to dnaJ proteins (Class III) |
| YGR278W | 1 | 0 | similarity to C.elegans LET-858 (Class III) |
| YLR424W | 12 | 0 | weak similarity to STU1P (Class III) |
| Cluster | CZ0144: |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YER082C | KRE31 | 2 | 0 | similarity to M.sexta steroid regulated MNG10 protein (Class III) |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YCL059C | KRR1 | 1 | 0 | strong similarity to fission yeast rev interacting protein mis3 (Class II) |
| YCR057C | PWP2 | 3 | 0 | periodic tryptophan protein |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YJL069C | 1 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YMR300C | ADE4 | 0 | 0 | amidophosphoribosyltransferase |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YDR299W | BFR2 | 2 | 2 | involved in protein transport steps at the Brefeldin A blocks |
| YPL217C | BMS1 | 0 | 0 | similarity to human hypothetical protein KIAA0187 (Class IV) |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YOR078W | BUD21 | 3 | 0 | weak similarity to YMR172W (Class IV) |
| YLR175W | CBF5 | 4 | 0 | putative rRNA pseuduridine synthase |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YHR011W | DIA4 | 1 | 0 | strong similarity to seryl-tRNA synthetases (Class II) |
| YPL266W | DIM1 | 1 | 0 | rRNA (adenine-N6,N6-)-dimethyltransferase |
| YLR129W | DIP2 | 0 | 0 | DOM34P-interacting protein |
| YOL021C | DIS3 | 5 | 0 | 3'->5' exoribonuclease required for 3' end formation of 5.8S rRNA |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR186W | EMG1 | 0 | 0 | strong similarity to S.pombe hypothetical protein C18G6.07C (Class IV) |
| YML130C | ERO1 | 1 | 0 | required for protein disulfide bond formation in the ER |
| YDL213C | FYV14 | 2 | 0 | weak similarity to potato small nuclear ribonucleoprotein U2B and human splicing factor homolog (Class III) |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YJL033W | HCA4 | 0 | 0 | can suppress the U14 snoRNA rRNA processing function |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YKL101W | HSL1 | 2 | 0 | ser/thr protein kinase, coupling septin ring assembly to cell cycle progression |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YHR148W | IMP3 | 3 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YNL075W | IMP4 | 1 | 1 | component of the U3 small nucleolar ribonucleoprotein |
| YER127W | LCP5 | 3 | 1 | NGG1P interacting protein |
| YKL143W | LTV1 | 5 | 0 | low-temperature viability protein |
| YJR002W | MPP10 | 3 | 2 | component of the U3 small nucleolar ribonucleoprotein |
| YPR112C | MRD1 | 0 | 0 | similarity to RNA-binding proteins (Class III) |
| YNR043W | MVD1 | 0 | 0 | mevalonate pyrophosphate decarboxylase |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YDL014W | NOP1 | 3 | 1 | fibrillarin |
| YDL148C | NOP14 | 1 | 0 | nuclear and nucleolar protein with possible role in ribosome biogenesis |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YEL050C | RML2 | 0 | 0 | ribosomal L2 protein, mitochondrial |
| YGL171W | ROK1 | 1 | 0 | ATP-dependent RNA helicase |
| YDR382W | RPP2B | 4 | 0 | 60S large subunit acidic ribosomal protein |
| YCL031C | RRP7 | 1 | 0 | involved in pre-rRNA processing and ribosome assembly |
| YPR137W | RRP9 | 0 | 0 | protein associated with the U3 small nucleolar RNA, required for pre-ribosomal RNA processing |
| YGL252C | RTG2 | 0 | 0 | retrograde regulation protein |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YNL287W | SEC21 | 1 | 0 | coatomer complex gamma chain (gamma-COP) of secretory pathway vesicles |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YLL011W | SOF1 | 0 | 0 | involved in 18S pre-rRNA production |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YDL166C | 2 | 1 | weak similarity to Pyrococcus horikoshii hypotheticalprotein PHBJ019 (Class IV) |
| YDR324C | 0 | 0 | weak similarity to beta transducin from S. pombe and other WD-40 repeat containing proteins (Class III) |
| YDR365C | 1 | 0 | weak similarity to Streptococcus M protein (Class III) |
| YDR449C | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YGR081C | 1 | 0 | weak similarity to mammalian myosin heavy chain (Class III) |
| YGR128C | 0 | 0 | hypothetical protein (Class V) |
| YGR145W | 2 | 1 | similarity to C.elegans hypothetical protein (Class IV) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YKL099C | 0 | 0 | similarity to C.elegans hypothetical proteins C18G6.06 and C16C10.2 (Class IV) |
| YKR060W | 1 | 0 | similarity to hypothetical protein S. pombe (Class IV) |
| YLR003C | 1 | 0 | weak similarity to PIR:T39953 hypothetical protein SPBC23G7.07c S. pombe (Class IV) |
| YLR222C | CST29 | 4 | 1 | similarity to DIP2P (Class III) |
| YLR409C | 1 | 1 | strong similarity to S. pombe beta-transducin (Class II) |
| YMR093W | 2 | 0 | weak similarity to PWP2P (Class III) |
| YNR054C | 0 | 0 | similarity to C.elegans hypothetical protein CEESL47F (Class IV) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YOR059C | 5 | 0 | weak similarity to YGL144C (Class IV) |
| YOR145C | 1 | 0 | strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein (Class IV) |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YPR144C | 1 | 0 | similarity to YDR060W and C.elegans hypothetical protein (Class IV) |
| Cluster | CZ0145: |
| YMR240C | CUS1 | 8 | 1 | U2 snRNP protein |
| YMR027W | HRT2 | 0 | 0 | high level expression reduced Ty3 transposition |
| YMR288W | HSH155 | 0 | 0 | component of a multiprotein splicing factor |
| YML049C | RSE1 | 2 | 1 | involved in RNA splicing and ER to Golgi transport |
| YGR074W | SMD1 | 10 | 0 | snRNA-associated protein |
| YOR159C | SME1 | 6 | 1 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPR182W | SMX3 | 7 | 2 | snRNA-associated protein of the SM family |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| YPR082C | DIB1 | 1 | 1 | required for mitosis |
| YBR065C | ECM2 | 1 | 0 | involved in cell wall biogenesis and architecture |
| YOR319W | HSH49 | 7 | 1 | essential yeast splicing factor |
| YPL213W | LEA1 | 2 | 1 | U2 A' snRNP protein |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YDL087C | LUC7 | 1 | 0 | yeast U1 snRNP protein with a role in 5' splice site recognition |
| YIR009W | MSL1 | 24 | 2 | U2 snRNA-associated protein with similarity to U2B |
| YBR119W | MUD1 | 7 | 0 | U1 snRNP-specific A protein |
| YDL043C | PRP11 | 21 | 2 | pre-mRNA splicing factor |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YML046W | PRP39 | 2 | 0 | pre-mRNA splicing factor |
| YPR178W | PRP4 | 4 | 2 | U4/U6 snRNP 52 KD protein |
| YKL012W | PRP40 | 4 | 1 | splicing factor |
| YDR235W | PRP42 | 0 | 0 | U1 snRNP associated protein, required for pre-mRNA splicing |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YBR055C | PRP6 | 3 | 1 | snRNP(U4/U6)-associated splicing factor |
| YDL030W | PRP9 | 18 | 3 | pre-mRNA splicing factor (snRNA-associated protein) |
| YER029C | SMB1 | 8 | 1 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YLR275W | SMD2 | 2 | 1 | U1 snRNP protein of the Sm class |
| YLR147C | SMD3 | 16 | 2 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YKL173W | SNU114 | 2 | 1 | U5 snRNP-specific protein |
| YDR240C | SNU56 | 0 | 0 | U1 snRNA protein, no counterpart in mammalian snRNP |
| YOR308C | SNU66 | 3 | 2 | component of U4/U6.U5 snRNP |
| YGR013W | SNU71 | 2 | 1 | associated with U1 snRNP, no counterpart in mammalian U1 snRNP |
| YHR041C | SRB2 | 18 | 0 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YDL209C | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YJR084W | 0 | 0 | weak similarity to S.pombe hypothetical protein SPAC1B3.08 (Class IV) |
| YLR424W | 12 | 0 | weak similarity to STU1P (Class III) |
| Cluster | CZ0146: |
| YDL087C | LUC7 | 1 | 0 | yeast U1 snRNP protein with a role in 5' splice site recognition |
| YBR119W | MUD1 | 7 | 0 | U1 snRNP-specific A protein |
| YHR086W | NAM8 | 0 | 0 | meiotic recombination protein |
| YGR074W | SMD1 | 10 | 0 | snRNA-associated protein |
| YOR159C | SME1 | 6 | 1 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPR182W | SMX3 | 7 | 2 | snRNA-associated protein of the SM family |
| YIL061C | SNP1 | 30 | 0 | U1 small nuclear ribonucleoprotein |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YPL178W | CBC2 | 3 | 1 | small subunit of the nuclear cap-binding protein complex CBC |
| YOL139C | CDC33 | 5 | 2 | translation initiation factor eIF4E |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| YMR240C | CUS1 | 8 | 0 | U2 snRNP protein |
| YPR082C | DIB1 | 1 | 1 | required for mitosis |
| YBR065C | ECM2 | 1 | 0 | involved in cell wall biogenesis and architecture |
| YMR288W | HSH155 | 0 | 0 | component of a multiprotein splicing factor |
| YPL213W | LEA1 | 2 | 1 | U2 A' snRNP protein |
| YER112W | LSM4 | 14 | 0 | Sm-like (Lsm) protein |
| YIR009W | MSL1 | 24 | 2 | U2 snRNA-associated protein with similarity to U2B |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YDL043C | PRP11 | 21 | 4 | pre-mRNA splicing factor |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YML046W | PRP39 | 2 | 0 | pre-mRNA splicing factor |
| YPR178W | PRP4 | 4 | 2 | U4/U6 snRNP 52 KD protein |
| YKL012W | PRP40 | 4 | 1 | splicing factor |
| YDR235W | PRP42 | 0 | 0 | U1 snRNP associated protein, required for pre-mRNA splicing |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YBR055C | PRP6 | 3 | 1 | snRNP(U4/U6)-associated splicing factor |
| YDL030W | PRP9 | 18 | 3 | pre-mRNA splicing factor (snRNA-associated protein) |
| YML049C | RSE1 | 2 | 1 | involved in RNA splicing and ER to Golgi transport |
| YER029C | SMB1 | 8 | 1 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YLR275W | SMD2 | 2 | 1 | U1 snRNP protein of the Sm class |
| YLR147C | SMD3 | 16 | 2 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YKL173W | SNU114 | 2 | 1 | U5 snRNP-specific protein |
| YDR240C | SNU56 | 0 | 0 | U1 snRNA protein, no counterpart in mammalian snRNP |
| YOR308C | SNU66 | 3 | 2 | component of U4/U6.U5 snRNP |
| YGR013W | SNU71 | 2 | 1 | associated with U1 snRNP, no counterpart in mammalian U1 snRNP |
| YHR041C | SRB2 | 18 | 0 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YMR125W | STO1 | 1 | 1 | large subunit of the nuclear cap-binding protein complex CBC |
| YGR162W | TIF4631 | 6 | 2 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 2 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YDL209C | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| YJR084W | 0 | 0 | weak similarity to S.pombe hypothetical protein SPAC1B3.08 (Class IV) |
| YLR424W | 12 | 0 | weak similarity to STU1P (Class III) |
| Cluster | CZ0147: |
| YBR065C | ECM2 | 1 | 0 | involved in cell wall biogenesis and architecture |
| YDR283C | GCN2 | 0 | 0 | ser/thr protein kinase |
| YBL026W | LSM2 | 15 | 5 | Sm-like (Lsm) protein |
| YER146W | LSM5 | 10 | 3 | Sm-like (Lsm) protein |
| YNL147W | LSM7 | 10 | 3 | Sm-like (Lsm) protein |
| YDR243C | PRP28 | 0 | 0 | pre-mRNA splicing factor RNA helicase of DEAD box family |
| YGR091W | PRP31 | 1 | 0 | pre-mRNA splicing protein |
| YPR178W | PRP4 | 4 | 2 | U4/U6 snRNP 52 KD protein |
| YDR088C | SLU7 | 4 | 2 | pre-mRNA splicing factor affecting 3' splice site choice |
| YBL074C | AAR2 | 0 | 0 | A1 cistron splicing factor |
| YPR057W | BRR1 | 0 | 0 | involved in snRNP biogenesis |
| YOL139C | CDC33 | 5 | 0 | translation initiation factor eIF4E |
| YMR213W | CEF1 | 2 | 1 | required during G2/M transition |
| YLR117C | CLF1 | 3 | 0 | strong similarity to Drosophila putative cell cycle control protein crn (Class II) |
| YMR240C | CUS1 | 8 | 0 | U2 snRNP protein |
| YDL160C | DHH1 | 13 | 2 | putative RNA helicase of the DEAD box family |
| YPR082C | DIB1 | 1 | 1 | required for mitosis |
| YMR288W | HSH155 | 0 | 0 | component of a multiprotein splicing factor |
| YGR074W | SMD1 | 10 | 2 | snRNA-associated protein |
| YOR159C | SME1 | 6 | 1 | spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA |
| YPR182W | SMX3 | 7 | 2 | snRNA-associated protein of the SM family |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YDR462W | MRPL28 | 0 | 0 | ribosomal protein of the large subunit (YmL28), mitochondrial |
| YMR024W | MRPL3 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR322W | MRPL35 | 0 | 0 | ribosomal protein YmL35 of the large subunit, mitochondrial |
| YKL170W | MRPL38 | 0 | 0 | ribosomal protein of the large subunit (L14), mitochondrial |
| YLR439W | MRPL4 | 1 | 1 | ribosomal protein, mitochondrial |
| YJL063C | MRPL8 | 1 | 0 | ribosomal protein L17, mitochondrial |
| YBR251W | MRPS5 | 0 | 0 | ribosomal protein S5, mitochondrial |
| YIR009W | MSL1 | 24 | 1 | U2 snRNA-associated protein with similarity to U2B |
| YBR119W | MUD1 | 7 | 0 | U1 snRNP-specific A protein |
| YCR077C | PAT1 | 20 | 5 | topoisomerase II-associated protein |
| YDL043C | PRP11 | 21 | 2 | pre-mRNA splicing factor |
| YGR006W | PRP18 | 1 | 1 | U5 snRNA-associated protein |
| YLL036C | PRP19 | 1 | 1 | non-snRNP sliceosome component required for DNA repair |
| YJL203W | PRP21 | 14 | 2 | pre-mRNA splicing factor |
| YMR268C | PRP24 | 1 | 0 | pre-mRNA splicing factor |
| YDR473C | PRP3 | 3 | 1 | essential splicing factor |
| YGR075C | PRP38 | 2 | 2 | pre-mRNA splicing factor |
| YML046W | PRP39 | 2 | 0 | pre-mRNA splicing factor |
| YKL012W | PRP40 | 4 | 1 | splicing factor |
| YDR235W | PRP42 | 0 | 0 | U1 snRNP associated protein, required for pre-mRNA splicing |
| YGL120C | PRP43 | 1 | 0 | involved in spliceosome disassembly |
| YPL151C | PRP46 | 4 | 0 | strong similarity to A.thaliana PRL1 and PRL2 proteins (Class II) |
| YBR055C | PRP6 | 3 | 1 | snRNP(U4/U6)-associated splicing factor |
| YDL030W | PRP9 | 18 | 3 | pre-mRNA splicing factor (snRNA-associated protein) |
| YML049C | RSE1 | 2 | 1 | involved in RNA splicing and ER to Golgi transport |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YER029C | SMB1 | 8 | 1 | associated with U1 snRNP as part of the Sm-core that is common to all spliceosomal snRNPs |
| YGR074W | SMD1 | 10 | 2 | snRNA-associated protein |
| YLR275W | SMD2 | 2 | 2 | U1 snRNP protein of the Sm class |
| YLR147C | SMD3 | 16 | 2 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YIL061C | SNP1 | 30 | 1 | U1 small nuclear ribonucleoprotein |
| YPR101W | SNT309 | 2 | 1 | splicing factor |
| YKL173W | SNU114 | 2 | 1 | U5 snRNP-specific protein |
| YDL098C | SNU23 | 2 | 1 | Putative RNA binding zinc finger protein |
| YDR240C | SNU56 | 0 | 0 | U1 snRNA protein, no counterpart in mammalian snRNP |
| YOR308C | SNU66 | 3 | 2 | component of U4/U6.U5 snRNP |
| YGR013W | SNU71 | 2 | 1 | associated with U1 snRNP, no counterpart in mammalian U1 snRNP |
| YBR152W | SPP381 | 2 | 1 | Suppressor of Pre-mRNA Processing mutant |
| YHR041C | SRB2 | 18 | 0 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YDR416W | SYF1 | 10 | 1 | synthetic lethal with CDC40 |
| YLR183C | TOS4 | 1 | 0 | similarity to YDR501W (Class IV) |
| YCR063W | BUD31 | 1 | 0 | strong similarity to Xenopus G10 and human edg-2 protein (Class II) |
| YDL209C | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YGL128C | 0 | 0 | weak similarity to dnaJ proteins (Class III) |
| YGR278W | 1 | 0 | similarity to C.elegans LET-858 (Class III) |
| YLR298C | YHC1 | 0 | 0 | associated with the U1 snRNP complex |
| YJR084W | 0 | 0 | weak similarity to S.pombe hypothetical protein SPAC1B3.08 (Class IV) |
| YLR409C | 1 | 0 | strong similarity to S. pombe beta-transducin (Class II) |
| YLR424W | 12 | 0 | weak similarity to STU1P (Class III) |
| YML025C | YML6 | 0 | 0 | ribosomal protein, mitochondrial |
| Cluster | CZ0148: |
| YDR301W | CFT1 | 7 | 7 | pre-mRNA 3'-end processing factor CF II |
| YLR115W | CFT2 | 6 | 6 | cleavage and polyadenylation specificity factor, part of CF II |
| YOR250C | CLP1 | 1 | 1 | cleavage/polyadenylation factor IA subunit |
| YJR093C | FIP1 | 10 | 8 | component of pre-mRNA polyadenylation factor PF I |
| YKR002W | PAP1 | 10 | 7 | poly(A) polymerase |
| YDR228C | PCF11 | 9 | 3 | component of pre-mRNA 3'-end processing factor CF I |
| YNL317W | PFS2 | 6 | 6 | polyadenylation factor I subunit 2 required for mRNA 3'-end processing, bridges two mRNA 3'-end processing factors |
| YAL043C | PTA1 | 8 | 6 | pre-tRNA processing protein / PF I subunit |
| YDR195W | REF2 | 2 | 1 | RNA 3'-end formation protein |
| YMR061W | RNA14 | 8 | 4 | component of pre-mRNA 3'-end processing factor CF I |
| YGL044C | RNA15 | 20 | 2 | component of pre-mRNA 3'-end processing factor CF I |
| YFL039C | ACT1 | 22 | 0 | actin |
| YIL035C | CKA1 | 4 | 0 | casein kinase II, catalytic alpha chain |
| YER133W | GLC7 | 17 | 1 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YDR225W | HTA1 | 4 | 0 | histone H2A |
| YNL222W | SSU72 | 0 | 0 | suppressor of cs mutant of SUA7 |
| YKL059C | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YOR179C | 0 | 0 | similarity to BRR5 protein (Class III) |
| YLR277C | YSH1 | 10 | 7 | component of pre-mRNA polyadenylation factor PF I |
| YPR107C | YTH1 | 8 | 7 | protein of the 3' processing complex |
| YPR107C | YTH1 | 8 | 7 | protein of the 3' processing complex |
| YNL222W | SSU72 | 0 | 0 | suppressor of cs mutant of SUA7 |
| YGL112C | TAF60 | 19 | 0 | TFIID and SAGA subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YOR344C | TYE7 | 2 | 0 | basic helix-loop-helix transcription factor |
| YJL029C | VPS53 | 1 | 0 | subunit of VP52-54 complex, required for protein sorting at the yeast late Golgi |
| YCL046W | 2 | 0 | questionable ORF (Class VI) |
| YGR156W | PTI1 | 1 | 0 | weak similarity to PIR:A40220 cleavage stimulation factor 64K chain - human (Class IV) |
| YHL035C | 0 | 0 | similarity to multidrug resistance proteins (Class III) |
| YKL059C | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YLR221C | 2 | 0 | hypothetical protein (Class V) |
| YML030W | 0 | 0 | weak similarity to CG9921 D. melanogaster (Class IV) |
| YOR179C | 0 | 0 | similarity to BRR5 protein (Class III) |
| YLR277C | YSH1 | 10 | 7 | component of pre-mRNA polyadenylation factor PF I |
| YPR107C | YTH1 | 8 | 7 | protein of the 3' processing complex |
| Cluster | CZ0149: |
| YLR074C | BUD20 | 1 | 0 | weak similarity to human zinc finger protein (Class III) |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YMR049C | ERB1 | 2 | 0 | weak similarity to A.thaliana PRL1 protein (Class III) |
| YER126C | KRE32 | 2 | 0 | weak similarity to E.coli colicin N (Class III) |
| YGL099W | KRE35 | 0 | 0 | similarity to putative human GTP-binding protein MMR1 (Class III) |
| YBR142W | MAK5 | 0 | 0 | ATP-dependent RNA helicase |
| YNL061W | NOP2 | 0 | 0 | nucleolar protein |
| YPL043W | NOP4 | 2 | 0 | nucleolar protein |
| YHR088W | RPF1 | 0 | 0 | similarity to hypothetical protein YNL075W (Class IV) |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YPL217C | BMS1 | 0 | 0 | similarity to human hypothetical protein KIAA0187 (Class IV) |
| YOL077C | BRX1 | 0 | 0 | strong similarity to C.elegans K12H4.3 protein (Class IV) |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YJL005W | CYR1 | 1 | 0 | adenylate cyclase |
| YGR155W | CYS4 | 2 | 0 | cystathionine beta-synthase |
| YDL031W | DBP10 | 0 | 0 | putative RNA helicase involved in ribosome biogenesis |
| YLR276C | DBP9 | 1 | 0 | similarity to YDL031W, MAK5P and RNA helicases (Class III) |
| YGR245C | SDA1 | 1 | 0 | required for normal organization of the actin cytoskeleton; required for passage through Start |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YBR267W | 0 | 0 | similarity to hypothetical protein YLR387C (Class IV) |
| YCR072C | 2 | 0 | strong similarity to S. pombe trp-asp repeat containing protein (Class II) |
| YDR060W | MAK21 | 1 | 0 | protein required for 60S ribosomal subunit biogenesis |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YLL034C | 0 | 0 | similarity to mammalian valosin (Class III) |
| YNL110C | 1 | 0 | weak similarity to fruit fly RNA-binding protein (Class III) |
| YPL093W | NOG1 | 0 | 0 | similarity to M.jannaschii GTP-binding protein (Class III) |
| YDL014W | NOP1 | 3 | 2 | fibrillarin |
| YOL041C | NOP12 | 0 | 0 | weak similarity to M.sativa NUM1, hnRNP protein from C. tentans and D. melanogaster, murine/bovine poly(A) binding protein II, and NSR1P (Class III) |
| YOR361C | PRT1 | 7 | 1 | translation initiation factor eIF3 subunit |
| YNL002C | RLP7 | 0 | 0 | strong similarity to mammalian ribosomal L7 proteins (Class II) |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YBR079C | RPG1 | 2 | 1 | translation initiation factor eIF3 (p110 subunit) |
| YDR382W | RPP2B | 4 | 0 | 60S large subunit acidic ribosomal protein |
| YGL048C | RPT6 | 4 | 0 | 26S proteasome regulatory subunit |
| YDR087C | RRP1 | 1 | 0 | involved in processing rRNA precursor species to mature rRNAs |
| YGR245C | SDA1 | 1 | 0 | required for normal organization of the actin cytoskeleton; required for passage through Start |
| YDR170C | SEC7 | 1 | 0 | component of non-clathrin vesicle coat |
| YLR197W | SIK1 | 5 | 1 | involved in pre-rRNA processing |
| YLR398C | SKI2 | 0 | 0 | antiviral protein and putative helicase |
| YEL026W | SNU13 | 0 | 0 | component of the U4/U6.U5 snRNP |
| YCL054W | SPB1 | 3 | 1 | required for ribosome synthesis, putative methylase |
| YFL002C | SPB4 | 1 | 0 | ATP-dependent RNA helicase of DEAH box family |
| YHR066W | SSF1 | 0 | 0 | mating protein |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YBR267W | 0 | 0 | similarity to hypothetical protein YLR387C (Class IV) |
| YCR072C | 2 | 0 | strong similarity to S. pombe trp-asp repeat containing protein (Class II) |
| YDR060W | MAK21 | 1 | 0 | protein required for 60S ribosomal subunit biogenesis |
| YDR101C | 0 | 0 | weak similarity to proliferation-associated protein (Class III) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| YER002W | 0 | 0 | weak similarity to chicken microfibril-associated protein (Class III) |
| YER006W | 0 | 0 | similarity to P.polycephalum myosin-related protein mlpA (Class III) |
| YER139C | 0 | 0 | similarity to hypothetical protein YDR066C (Class IV) |
| YGL111W | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YGR103W | 0 | 0 | similarity to zebrafish essential for embryonic development gene pescadillo (Class III) |
| YHR052W | 0 | 0 | weak similarity to P.yoelii rhoptry protein (Class III) |
| YHR085W | 1 | 0 | weak similarity to fruit fly brahma transcriptional activator (Class III) |
| YJL109C | 0 | 0 | weak similarity to ATPase DRS2P (Class III) |
| YKL014C | 0 | 0 | similarity to hypothetical protein SPCC14G10.02 S. pombe (Class IV) |
| YKR081C | 0 | 0 | strong similarity to hypothetical protein S. pombe (Class IV) |
| YLL034C | 0 | 0 | similarity to mammalian valosin (Class III) |
| YLR002C | 2 | 0 | similarity to hypothetical C. elegans protein (Class IV) |
| YLR009W | 2 | 0 | similarity to ribosomal protein L24.e.B (Class III) |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YLR221C | 2 | 0 | hypothetical protein (Class V) |
| YMR163C | 2 | 0 | hypothetical protein (Class V) |
| YNL110C | 1 | 0 | weak similarity to fruit fly RNA-binding protein (Class III) |
| YNL182C | 4 | 0 | weak similarity to S.pombe hypothetical protein (Class IV) |
| YNR053C | 6 | 0 | strong similarity to human breast tumor associated autoantigen (Class II) |
| YGR281W | YOR1 | 0 | 0 | ATP-binding cassette transporter protein |
| YOR206W | NOC2 | 2 | 0 | crucial for intranuclear movement of ribosomal precursor particles |
| YOR227W | 0 | 0 | similarity to microtubule-interacting protein MHP1P (Class III) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| YOR272W | YTM1 | 0 | 0 | microtubule-interacting protein |
| Cluster | CZ0150: |
| YNL118C | DCP2 | 5 | 2 | suppressor protein of a yeast pet mutant |
| YOL149W | DCP1 | 21 | 2 | mRNA decapping enzyme |
| YML091C | RPM2 | 0 | 0 | ribonuclease P precursor, mitochondrial |
| YEL015W | 12 | 2 | weak similarity to SPA2P (Class III) |
| Cluster | CZ0151: |
| YDR037W | KRS1 | 0 | 0 | lysyl-tRNA synthetase, cytosolic |
| YDL126C | CDC48 | 3 | 0 | microsomal protein of CDC48/PAS1/SEC18 family of ATPases |
| YPR056W | TFB4 | 1 | 0 | component of RNA polymerase transcription initiation TFIIH factor |
| Cluster | CZ0152: |
| YBL024W | NCL1 | 1 | 0 | tRNA (cytosine-5-)-methyltransferase |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YNL284C | MRPL10 | 0 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YDR382W | RPP2B | 4 | 0 | 60S large subunit acidic ribosomal protein |
| Cluster | CZ0153: |
| YGL094C | PAN2 | 2 | 1 | component of PAB1P-stimulated poly(A) ribonuclease |
| YKL025C | PAN3 | 5 | 1 | component of the PAB1P-dependent poly(A) ribonuclease |
| Cluster | CZ0154: |
| YBR167C | POP7 | 2 | 1 | nuclear RNase P subunit |
| YNL221C | POP1 | 3 | 0 | protein component of ribonuclease P and ribonuclease MRP |
| YNL282W | POP3 | 2 | 0 | involved in processsing of tRNAs and rRNAs |
| YBR257W | POP4 | 0 | 0 | involved in processing of tRNAs and rRNAs |
| YAL033W | POP5 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YGR030C | POP6 | 0 | 0 | required for processing of tRNAs and rRNAs |
| YBL018C | POP8 | 1 | 0 | required for processing of tRNAs and rRNAs |
| YHR062C | RPP1 | 2 | 1 | required for processing of tRNA and 35S rRNA |
| Cluster | CZ0155: |
| YNL016W | PUB1 | 3 | 0 | major polyadenylated RNA-binding protein of nucleus and cytoplasm |
| YJL033W | HCA4 | 0 | 0 | can suppress the U14 snoRNA rRNA processing function |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YDL051W | LHP1 | 1 | 0 | RNA binding protein |
| YPL190C | NAB3 | 1 | 0 | polyadenylated RNA-binding protein |
| YMR080C | NAM7 | 9 | 0 | nonsense-mediated mRNA decay protein |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| YNL251C | NRD1 | 0 | 0 | involved in regulation of nuclear pre-mRNA abundance |
| YDL167C | NRP1 | 2 | 0 | similarity to human TAF2N Zinc finger TBP-associated factor N, component of the TFIID complex (Class III) |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YIR001C | SGN1 | 2 | 0 | similarity to D.melanogaster RNA binding protein (Class III) |
| YLR147C | SMD3 | 16 | 0 | spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
| YOR290C | SNF2 | 3 | 0 | component of SWI/SNF global transcription activator complex |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| YGR162W | TIF4631 | 6 | 0 | mRNA cap-binding protein (eIF4F), 150K subunit |
| YGL049C | TIF4632 | 3 | 0 | mRNA cap-binding protein (eIF4F), 130K subunit |
| YML117W | 0 | 0 | similarity to YPL184C (Class IV) |
| Cluster | CZ0156: |
| YPL212C | PUS1 | 2 | 0 | pseudouridine synthase 1 |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| Cluster | CZ0157: |
| YGL246C | RAI1 | 0 | 0 | weak similarity to C.elegans dom-3 protein (Class III) |
| YOR048C | RAT1 | 0 | 0 | 5'-3' exoribonuclease |
| YDL047W | SIT4 | 4 | 0 | ser/thr protein phosphatase |
| Cluster | CZ0158: |
| YKL193C | SDS22 | 0 | 0 | regulatory subunit for the mitotic function of type I protein phosphatase |
| YER133W | GLC7 | 17 | 0 | ser/thr phosphoprotein phosphatase 1, catalytic chain |
| Cluster | CZ0159: |
| YJL031C | BET4 | 2 | 1 | geranylgeranyl transferase, alpha chain |
| YPR176C | BET2 | 1 | 1 | geranylgeranyltransferase type II beta subunit |
| Cluster | CZ0160: |
| YPL203W | TPK2 | 3 | 1 | cAMP-dependent protein kinase 2, catalytic chain |
| YIL033C | BCY1 | 6 | 2 | cAMP dependent protein kinase, regulatory subunit |
| YKL166C | TPK3 | 1 | 1 | cAMP-dependent protein kinase 3, catalytic chain |
| Cluster | CZ0161: |
| YDR099W | BMH2 | 5 | 0 | suppressor of clathrin deficiency |
| YER177W | BMH1 | 1 | 0 | 14-3-3 protein involved in rapamycin-sensitive signalling |
| YDR001C | NTH1 | 1 | 0 | neutral trehalase (alpha,alpha-trehalase) |
| YBR001C | NTH2 | 0 | 0 | alpha,alpha-trehalase |
| YNL267W | PIK1 | 1 | 0 | phosphatidylinositol 4-kinase |
| YGL252C | RTG2 | 0 | 0 | retrograde regulation protein |
| YAL017W | FUN31 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| Cluster | CZ0162: |
| YBR216C | 3 | 1 | strong similarity to hypothetical protein YGL060W (Class IV) |
| YML007W | YAP1 | 7 | 1 | transcriptional activator involved in oxidative stress response |
| Cluster | CZ0163: |
| YBR225W | 0 | 0 | hypothetical protein (Class V) |
| YLR310C | CDC25 | 8 | 0 | GDP/GTP exchange factor for RAS1P and RAS2P |
| YGL197W | MDS3 | 1 | 0 | negative regulator of early meiotic expression |
| Cluster | CZ0164: |
| YBR238C | 1 | 0 | strong similarity to general chromatin factor SPT16P (Class II) |
| YBL085W | BOI1 | 2 | 0 | BEM1 protein-binding protein |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| Cluster | CZ0165: |
| YML059C | 0 | 0 | similarity to C.elegans ZK370.4 protein (Class IV) |
| YBR221C | PDB1 | 3 | 0 | pyruvate dehydrogenase (lipoamide) beta chain precursor |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| Cluster | CZ0166: |
| YDR477W | SNF1 | 10 | 4 | carbon catabolite derepressing ser/thr protein kinase |
| YGL115W | SNF4 | 10 | 4 | nuclear regulatory protein |
| YER177W | BMH1 | 1 | 0 | 14-3-3 protein involved in rapamycin-sensitive signalling |
| YIL035C | CKA1 | 4 | 1 | casein kinase II, catalytic alpha chain |
| YGL019W | CKB1 | 6 | 1 | casein kinase II, beta subunit |
| YER027C | GAL83 | 3 | 2 | glucose repression protein |
| YER129W | PAK1 | 2 | 0 | DNA polymerase alpha suppressing protein kinase |
| YDR028C | REG1 | 0 | 0 | regulatory subunit for protein phosphatase GLC7P |
| YDR422C | SIP1 | 7 | 2 | multicopy suppressor of SNF1 |
| YGL208W | SIP2 | 2 | 2 | dominant suppressor of some ts mutations in RPO21 and PRP4 |
| Cluster | CZ0167: |
| YJL005W | CYR1 | 1 | 1 | adenylate cyclase |
| YNL138W | SRV2 | 3 | 2 | adenylate cyclase-associated protein, 70kDa |
| YFL039C | ACT1 | 22 | 1 | actin |
| YGR233C | PHO81 | 0 | 0 | cyclin-dependent kinase inhibitor |
| Cluster | CZ0168: |
| YDL090C | RAM1 | 1 | 1 | protein farnesyltransferase, beta subunit |
| YKL019W | RAM2 | 3 | 1 | protein farnesyltransferase, alpha subunit |
| YKL152C | GPM1 | 0 | 0 | phosphoglycerate mutase |
| Cluster | CZ0169: |
| YDR075W | PPH3 | 1 | 0 | protein ser/thr phosphatase |
| YBL046W | 1 | 1 | weak similarity to hypothetical protein YOR054C (Class IV) |
| YNL201C | 12 | 1 | weak similarity to pleiotropic drug resistance control protein PDR6 (Class III) |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YDR379W | RGA2 | 0 | 0 | similarity to Dbm1p and to the rat GAP-associatedprotein p190 (Class III) |
| YML010W | SPT5 | 0 | 0 | transcription elongation protein |
| YGR192C | TDH3 | 1 | 0 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| YDL112W | TRM3 | 0 | 0 | tRNA (guanosine-2'-O-)-methyltransferase |
| Cluster | CZ0170: |
| YGL190C | CDC55 | 2 | 1 | ser/thr phosphatase 2A regulatory subunit B |
| YDL188C | PPH22 | 2 | 0 | protein ser/thr phosphatase PP2A-2 |
| YOR014W | RTS1 | 6 | 2 | potential regulatory subunit of protein phosphatase 2A |
| YAL016W | TPD3 | 3 | 2 | ser/thr protein phosphatase 2A, regulatory chain A |
| YMR273C | ZDS1 | 1 | 0 | involved in negative regulation of cell polarity |
| YML109W | ZDS2 | 3 | 1 | multicopy suppressor of SIN4 |
| YFL007W | BLM3 | 0 | 0 | weak similarity to Mms19p (Class IV) |
| YOR349W | CIN1 | 0 | 0 | chromosome segregation protein |
| YML126C | ERG13 | 1 | 0 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YGL194C | HOS2 | 0 | 0 | putative histone deacetylase |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YLR347C | KAP95 | 35 | 1 | karyopherin-beta |
| YAL024C | LTE1 | 1 | 0 | GDP/GTP exchange factor |
| YMR109W | MYO5 | 1 | 0 | myosin I |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YDL134C | PPH21 | 6 | 2 | protein ser/thr phosphatase PP2A-1 |
| YER012W | PRE1 | 1 | 0 | 20S proteasome subunit C11(beta4) |
| YOR362C | PRE10 | 3 | 0 | 20S proteasome subunit C1 (alpha7) |
| YPR103W | PRE2 | 1 | 0 | 20S proteasome subunit (beta5) |
| YFR050C | PRE4 | 0 | 0 | 20S proteasome subunit(beta7) |
| YMR314W | PRE5 | 2 | 0 | 20S proteasome subunit(alpha6) |
| YOL038W | PRE6 | 2 | 0 | 20S proteasome subunit (alpha4) |
| YBL041W | PRE7 | 0 | 0 | 20S proteasome subunit(beta6) |
| YML092C | PRE8 | 14 | 0 | 20S proteasome subunit Y7 (alpha2) |
| YGR135W | PRE9 | 1 | 0 | 20S proteasome subunit Y13 (alpha3) |
| YOR157C | PUP1 | 4 | 1 | 20S proteasome subunit (beta2) |
| YGR253C | PUP2 | 2 | 0 | 20S proteasome subunit(alpha5) |
| YER094C | PUP3 | 2 | 1 | 20S proteasome subunit (beta3) |
| YPL152W | RRD2 | 2 | 0 | strong similarity to human phosphotyrosyl phosphatase activator (Class II) |
| YGL011C | SCL1 | 1 | 0 | 20S proteasome subunit YC7ALPHA/Y8 (alpha1) |
| YBR103W | SIF2 | 8 | 1 | SIR4P interacting protein |
| YNL189W | SRP1 | 140 | 3 | karyopherin-alpha or importin |
| YJR009C | TDH2 | 3 | 1 | glyceraldehyde-3-phosphate dehydrogenase 2 |
| YGR192C | TDH3 | 1 | 1 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YBL104C | 1 | 0 | weak similarity to S.pombe hypothetical protein SPAC12G12.01c (Class IV) |
| YCR033W | 1 | 0 | similarity to nuclear receptor co-repressor N-Cor (Class III) |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YGR161C | 0 | 0 | hypothetical protein (Class V) |
| YIL112W | 1 | 1 | similarity to ankyrin and coiled-coil proteins (Class III) |
| YKR029C | 1 | 0 | similarity to YJL105W and Lentinula MFBA protein (Class III) |
| YGR281W | YOR1 | 0 | 0 | ATP-binding cassette transporter protein |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | CZ0171: |
| YAL059W | ECM1 | 0 | 0 | involved in cell wall biosynthesis |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YBR115C | LYS2 | 0 | 0 | L-aminoadipate-semialdehyde dehydrogenase, large subunit |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YDR395W | SXM1 | 11 | 0 | putative beta-karyopherin |
| Cluster | CZ0172: |
| YFR009W | GCN20 | 1 | 1 | positive effector of GCN2P |
| YGL195W | GCN1 | 1 | 1 | translational activator |
| Cluster | CZ0173: |
| YBR128C | APG14 | 2 | 1 | required for autophagy |
| YPL120W | VPS30 | 2 | 1 | involved in vacuolare protein sorting and autophagy |
| Cluster | CZ0174: |
| YBL105C | PKC1 | 5 | 0 | ser/thr protein kinase |
| YGR254W | ENO1 | 1 | 0 | enolase I (2-phosphoglycerate dehydratase) |
| Cluster | CZ0175: |
| YGR123C | PPT1 | 6 | 0 | protein ser/thr phosphatase |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YPL240C | HSP82 | 8 | 0 | heat shock protein |
| Cluster | CZ0176: |
| YBL056W | PTC3 | 2 | 1 | ser/thr protein phosphatase PP2C |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YNL250W | RAD50 | 1 | 0 | DNA repair protein |
| YBR097W | VPS15 | 1 | 0 | ser/thr protein kinase |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| Cluster | CZ0177: |
| YBR125C | PTC4 | 1 | 1 | serine/threonine protein phosphatases (PP2Cs) |
| YDR071C | 3 | 1 | similarity to O.aries arylalkylamine N-acetyltransferase (Class III) |
| YDR186C | 0 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0178: |
| YBR123C | TFC1 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 95 kD |
| YAL001C | TFC3 | 1 | 1 | TFIIIC (transcription initiation factor) subunit, 138 kD |
| YGR047C | TFC4 | 4 | 0 | TFIIIC (transcription initiation factor) subunit, 131 kD |
| YDR362C | TFC6 | 2 | 1 | TFIIIC (transcription initiation factor) subunit, 91 kD |
| YOR110W | TFC7 | 5 | 1 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| YPL007C | TFC8 | 0 | 0 | RNA Polymerase III transcription initiation factor TFIIIC (tau), 60 kDa subunit |
| Cluster | CZ0179: |
| YDL070W | BDF2 | 4 | 0 | similarity to bromodomain protein BDF1P (Class III) |
| YLR399C | BDF1 | 1 | 0 | sporulation protein |
| Cluster | CZ0180: |
| YJL168C | SET2 | 2 | 0 | enhancer of zeste-like |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| Cluster | CZ0181: |
| YGR116W | SPT6 | 4 | 0 | transcription elongation protein |
| YIL035C | CKA1 | 4 | 2 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 2 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 2 | casein kinase II, beta subunit |
| YPR133C | IWS1 | 1 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| Cluster | CZ0182: |
| YOR194C | TOA1 | 5 | 1 | TFIIA subunit (transcription initiation factor), 32 kD |
| YKL058W | TOA2 | 4 | 1 | TFIIA subunit (transcription initiation factor), 13.5 kD |
| Cluster | CZ0183: |
| YAL019W | FUN30 | 0 | 0 | similarity to helicases of the SNF2/RAD54 family (Class III) |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YBL088C | TEL1 | 0 | 0 | telomere length control protein |
| Cluster | CZ0184: |
| YBR287W | 0 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| Cluster | CZ0185: |
| YDR196C | 1 | 0 | similarity to C.elegans hypothetical protein T05G5.5 (Class IV) |
| YJL194W | CDC6 | 2 | 0 | cell division control protein |
| Cluster | CZ0186: |
| YKR079C | 1 | 0 | similarity to S.pombe hypothetical protein SPAC1D4.10 (Class IV) |
| YJL208C | NUC1 | 2 | 0 | nuclease, mitochondrial |
| Cluster | CZ0187: |
| YMR284W | YKU70 | 1 | 0 | high-affinity DNA-binding protein |
| YMR106C | YKU80 | 0 | 0 | component of DNA end-joining repair pathway |
| Cluster | CZ0188: |
| YKL067W | YNK1 | 3 | 0 | nucleoside diphosphate kinase |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| Cluster | CZ0189: |
| YER164W | CHD1 | 0 | 0 | transcriptional regulator |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YMR172W | HOT1 | 1 | 0 | similarity to MSN1 protein (Class III) |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YMR309C | NIP1 | 7 | 2 | associated with 40s ribosomal subunit |
| YOR361C | PRT1 | 7 | 3 | translation initiation factor eIF3 subunit |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YGL207W | SPT16 | 3 | 0 | general chromatin factor |
| YER103W | SSA4 | 4 | 0 | heat shock protein of HSP70 family, cytosolic |
| YDR429C | TIF35 | 6 | 1 | translation initiation factor eIF3 (p33 subunit) |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| YKL088W | 2 | 0 | similarity to C.tropicalis hal3 protein, to C-term. of SIS2P and to hypothetical protein YOR054C (Class III) |
| YGR270W | YTA7 | 0 | 0 | 26S proteasome subunit |
| Cluster | CZ0190: |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| YBR278W | DPB3 | 6 | 0 | DNA-directed DNA polymerase epsilon, subunit C |
| YDR121W | DPB4 | 1 | 0 | DNA polymerase II (epsilon) 4th subunit |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| Cluster | CZ0191: |
| YFL024C | EPL1 | 0 | 0 | weak similarity to YMR164C and GAL11P (Class III) |
| YOR244W | ESA1 | 2 | 0 | histone acetyltransferase |
| YFL039C | ACT1 | 22 | 0 | actin |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YPR023C | EAF3 | 0 | 0 | similarity to human hypothetical protein (Class IV) |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YHR099W | TRA1 | 15 | 0 | component of the Ada-Spt transcriptional regulatory complex |
| YDR359C | VID21 | 0 | 0 | weak similarity to human trichohyalin (Class III) |
| YNL107W | YAF9 | 1 | 0 | similarity to human AF-9 protein (Class III) |
| YML007W | YAP1 | 7 | 0 | transcriptional activator involved in oxidative stress response |
| YEL018W | 1 | 0 | weak similarity to RAD50P (Class III) |
| Cluster | CZ0192: |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YFR013W | IOC3 | 1 | 0 | similarity to YOL017W (Class IV) |
| YMR091C | NPL6 | 1 | 1 | nuclear protein localization factor |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YPR110C | RPC40 | 6 | 0 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YLR357W | RSC2 | 1 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YKR008W | RSC4 | 0 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YCR052W | RSC6 | 5 | 1 | subunit of the RSC complex |
| YFR037C | RSC8 | 8 | 2 | subunit of the RSC complex |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YER148W | SPT15 | 10 | 0 | the TATA-binding protein TBP |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| YLR033W | RSC58 | 0 | 0 | hypothetical protein (Class V) |
| YOL017W | 0 | 0 | similarity to YFR013W (Class IV) |
| Cluster | CZ0193: |
| YHR013C | ARD1 | 0 | 0 | protein N-acetyltransferase subunit |
| YDL040C | NAT1 | 0 | 0 | protein N-acetyltransferase subunit |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YGR254W | ENO1 | 1 | 0 | enolase I (2-phosphoglycerate dehydratase) |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YGR090W | 1 | 0 | similarity to PIR:T40678 hypothetical protein SPBC776.08c S. pombe (Class IV) |
| Cluster | CZ0194: |
| YFR028C | CDC14 | 1 | 0 | dual specificity phosphatase |
| YDL042C | SIR2 | 3 | 2 | silencing regulatory protein and DNA-repair protein |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YGR282C | BGL2 | 0 | 0 | endo-beta-1,3-glucanase of the cell wall |
| YDR171W | HSP42 | 0 | 0 | weak similarity to Streptomyces HSP18 protein |
| YJL076W | NET1 | 2 | 1 | required for rDNA silencing and nucleolar integrity |
| YDR227W | SIR4 | 6 | 1 | silencing regulatory and DNA-repair protein |
| YGR192C | TDH3 | 1 | 0 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| Cluster | CZ0195: |
| YDR127W | ARO1 | 0 | 0 | arom pentafunctional enzyme |
| YER095W | RAD51 | 11 | 1 | DNA repair protein |
| YJL008C | CCT8 | 1 | 0 | component of chaperonin-containing T-complex |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YJR109C | CPA2 | 0 | 0 | arginine-specific carbamoylphosphate synthase, large chain |
| YFR009W | GCN20 | 1 | 0 | positive effector of GCN2P |
| YKL104C | GFA1 | 1 | 0 | glucosamine--fructose-6-phosphate transaminase |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YOR136W | IDH2 | 5 | 0 | isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial |
| YER086W | ILV1 | 7 | 0 | anabolic serine and threonine dehydratase precursor |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YNL085W | MKT1 | 0 | 0 | required for propagation of M2 dsRNA satellite of L-A virus |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YML032C | RAD52 | 5 | 2 | recombination and DNA repair protein |
| YAR007C | RFA1 | 4 | 1 | DNA replication factor A, 69 KD subunit |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR151C | RPB2 | 2 | 0 | DNA-directed RNA polymerase II, 140 kDa chain |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 0 | 26S proteasome regulatory subunit |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YGL245W | 3 | 0 | strong similarity to glutamine--tRNA ligase (Class II) |
| YGR234W | YHB1 | 1 | 0 | flavohemoglobin |
| Cluster | CZ0196: |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YER148W | SPT15 | 10 | 2 | the TATA-binding protein TBP |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YGL241W | KAP114 | 1 | 1 | Member of the karyopherin-beta family, nuclear import |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR117W | RPT5 | 7 | 0 | 26S proteasome regulatory subunit |
| YGR274C | TAF145 | 2 | 1 | TFIID subunit (TBP-associated factor), 145 kD |
| YGL112C | TAF60 | 19 | 1 | TFIID and SAGA subunit |
| YBR198C | TAF90 | 16 | 1 | TFIID and SAGA subunit |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YLR249W | YEF3 | 3 | 0 | translation elongation factor eEF3 |
| Cluster | CZ0197: |
| YDR172W | SUP35 | 5 | 1 | eukaryotic peptide chain release factor GTP-binding subunit |
| YBR143C | SUP45 | 4 | 1 | translational release factor |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YLR429W | CRN1 | 1 | 0 | a coronin, that promotes actin polymerization and crosslinking to microtubules |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YBR136W | MEC1 | 2 | 0 | cell cycle checkpoint protein |
| YHR015W | MIP6 | 1 | 0 | similarity to PES4 a PAB-like protein (Class III) |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YOR150W | MRPL23 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YPL190C | NAB3 | 1 | 0 | polyadenylated RNA-binding protein |
| YNL251C | NRD1 | 0 | 0 | involved in regulation of nuclear pre-mRNA abundance |
| YLR371W | ROM2 | 2 | 0 | GDP/GTP exchange factor for RHO1P |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPL083C | SEN54 | 4 | 0 | tRNA splicing endonuclease alpha subunit |
| YPL237W | SUI3 | 0 | 0 | translation initiation factor eIF2 beta subunit |
| YIL129C | TAO3 | 1 | 0 | Transcriptional Activator of OCH1 |
| YDL058W | USO1 | 0 | 0 | intracellular protein transport protein |
| YOR069W | VPS5 | 3 | 0 | involved in Golgi retention and vacuolar sorting |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YJL017W | 2 | 0 | weak similarity to YLR187W (Class IV) |
| YLR386W | 11 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| YML117W | 0 | 0 | similarity to YPL184C (Class IV) |
| Cluster | CZ0198: |
| YBR289W | SNF5 | 1 | 0 | component of SWI/SNF transcription activator complex |
| YNL207W | 1 | 0 | similarity to M.jannaschii hypothetical protein MJ1073 (Class IV) |
| YMR033W | ARP9 | 0 | 0 | Actin-related protein |
| YER155C | BEM2 | 0 | 0 | GTPase-activating protein |
| YPL266W | DIM1 | 1 | 0 | rRNA (adenine-N6,N6-)-dimethyltransferase |
| YBR247C | ENP1 | 0 | 0 | effects N-glycosylation |
| YPL204W | HRR25 | 4 | 0 | casein kinase I, ser/thr/tyr protein kinase |
| YKL143W | LTV1 | 5 | 0 | low-temperature viability protein |
| YNR023W | SNF12 | 0 | 0 | component of SWI/SNF global transcription activator complex |
| YOR290C | SNF2 | 3 | 1 | component of SWI/SNF global transcription activator complex |
| YHL025W | SNF6 | 2 | 0 | global transcription activator |
| YPL016W | SWI1 | 6 | 0 | component of SWI/SNF global transcription activator complex |
| YJL176C | SWI3 | 2 | 1 | transcription regulatory protein |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YDL060W | TSR1 | 0 | 0 | similarity to C.elegans hypothetical protein (Class IV) |
| YFL049W | 2 | 0 | weak similarity to NPL6P (Class III) |
| YGR054W | 1 | 0 | similarity to C.elegans E04D5.1 protein (Class IV) |
| YOR056C | 0 | 0 | weak similarity to human phosphorylation regulatory protein HP-10 (Class III) |
| YOR145C | 1 | 0 | strong similarity to hypothtical S. pombe protein and to hypothetical C. elegans protein (Class IV) |
| YPL012W | 0 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0199: |
| YAR003W | FUN16 | 3 | 1 | similarity to human RB protein binding protein (Class III) |
| YBR175W | SWD3 | 6 | 1 | similarity to S.pombe beta-transducin (Class III) |
| YLR015W | BRE2 | 2 | 1 | weak similarity to S.pombe hypothetical protein SPBC13G1 (Class IV) |
| YDR069C | DOA4 | 2 | 0 | ubiquitin-specific protease |
| YHR064C | PDR13 | 0 | 0 | regulator protein involved in pleiotropic drug resistance |
| YJR113C | RSM7 | 2 | 0 | similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7 (Class III) |
| YHR119W | SET1 | 3 | 0 | involved in chromatin-mediated gene regulation |
| YDR469W | SDC1 | 5 | 1 | weak similarity to D. melanogaster hypotheticalprotein (Class IV) |
| YPL138C | SPP1 | 2 | 0 | weak similarity to fruit fly polycomblike nuclear protein (Class III) |
| Cluster | CZ0200: |
| YBR049C | REB1 | 0 | 0 | transcription factor |
| YLR176C | RFX1 | 0 | 0 | repressor of DNA damage-inducible genes |
| YGL234W | ADE5,7 | 1 | 0 | phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YFR013W | IOC3 | 1 | 0 | similarity to YOL017W (Class IV) |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YMR091C | NPL6 | 1 | 1 | nuclear protein localization factor |
| YAR007C | RFA1 | 4 | 0 | DNA replication factor A, 69 KD subunit |
| YJL026W | RNR2 | 2 | 0 | ribonucleoside-diphosphate reductase, small subunit |
| YNR003C | RPC34 | 4 | 0 | DNA-directed RNA polymerase III, 34 KD subunit |
| YPR110C | RPC40 | 6 | 0 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YLR357W | RSC2 | 1 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YDR303C | RSC3 | 0 | 0 | similarity to transcriptional regulator proteins (Class III) |
| YFR037C | RSC8 | 8 | 3 | subunit of the RSC complex |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YLR321C | SFH1 | 9 | 2 | subunit of the RSC complex |
| YIL126W | STH1 | 2 | 2 | subunit of the RSC complex |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YGR274C | TAF145 | 2 | 0 | TFIID subunit (TBP-associated factor), 145 kD |
| YOR110W | TFC7 | 5 | 0 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YLR033W | RSC58 | 0 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0201: |
| YOL145C | CTR9 | 2 | 0 | required for G1 cyclin expression |
| YGL244W | RTF1 | 1 | 0 | regulates DNA binding properties of TBP |
| YGL207W | SPT16 | 3 | 1 | general chromatin factor |
| YLR418C | CDC73 | 1 | 0 | DNA-directed RNA polymerase II accessory protein |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YOR123C | LEO1 | 5 | 0 | extremely hydrophilic protein |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YBR279W | PAF1 | 0 | 0 | DNA-directed RNA polymerase II regulator |
| YML069W | POB3 | 3 | 1 | protein that binds to DNA polymerase I (PolI) |
| Cluster | CZ0202: |
| YEL037C | RAD23 | 6 | 2 | nucleotide excision repair protein (ubiquitin-like protein) |
| YAR007C | RFA1 | 4 | 2 | DNA replication factor A, 69 KD subunit |
| YDR311W | TFB1 | 24 | 1 | TFIIH subunit (transcription initiation factor), 75 kD |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YBR136W | MEC1 | 2 | 0 | cell cycle checkpoint protein |
| YIR002C | MPH1 | 2 | 0 | protection of the genome from spontaneous and chemically induced damage |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YOL090W | MSH2 | 5 | 1 | DNA mismatch repair protein |
| YDR097C | MSH6 | 3 | 1 | DNA mismatch repair protein |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| YER162C | RAD4 | 3 | 1 | excision repair protein |
| YML032C | RAD52 | 5 | 2 | recombination and DNA repair protein |
| YNL312W | RFA2 | 3 | 2 | DNA replication factor A, 36 kDa subunit |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YER021W | RPN3 | 2 | 0 | 26S proteasome regulatory subunit |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 1 | 26S proteasome regulatory subunit |
| YPR032W | SRO7 | 3 | 0 | polarized exocytosis by regulating SNARE function |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YKL028W | TFA1 | 3 | 1 | TFIIE subunit (transcription initiation factor), 66 kD |
| YPR056W | TFB4 | 1 | 0 | component of RNA polymerase transcription initiation TFIIH factor |
| YDR314C | 1 | 0 | weak similarity to hypothetical S.pombe protein (Class IV) |
| Cluster | CZ0203: |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YDL002C | NHP10 | 3 | 2 | Non-histone protein |
| YFL039C | ACT1 | 22 | 0 | actin |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YJL081C | ARP4 | 0 | 0 | actin-related protein |
| YOR141C | ARP8 | 0 | 0 | Actin-related protein |
| YGL150C | INO80 | 2 | 1 | similarity to SNF2P and human SNF2alpha (Class III) |
| YFR013W | IOC3 | 1 | 0 | similarity to YOL017W (Class IV) |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YMR091C | NPL6 | 1 | 1 | nuclear protein localization factor |
| YPR110C | RPC40 | 6 | 0 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YLR357W | RSC2 | 1 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YKR008W | RSC4 | 0 | 0 | member of RSC complex, which remodels the structure of chromatin |
| YCR052W | RSC6 | 5 | 1 | subunit of the RSC complex |
| YFR037C | RSC8 | 8 | 2 | subunit of the RSC complex |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YER092W | IES5 | 4 | 1 | weak similarity to tryptophan synthase beta subunit - Aquifex aeolicus (Class III) |
| YFL013C | IES1 | 3 | 0 | weak similarity to Dictyostelium protein kinase (Class III) |
| YLR033W | RSC58 | 0 | 0 | hypothetical protein (Class V) |
| YOL017W | 0 | 0 | similarity to YFR013W (Class IV) |
| Cluster | CZ0204: |
| YPL001W | HAT1 | 1 | 1 | histone acetyltransferase subunit |
| YEL056W | HAT2 | 1 | 1 | subunit of the major yeast histone acetyltransferase |
| YBR009C | HHF1 | 3 | 0 | histone H4 |
| YBR272C | HSM3 | 2 | 0 | mismatch repair protein |
| YDL070W | BDF2 | 4 | 0 | similarity to bromodomain protein BDF1P (Class III) |
| YGL190C | CDC55 | 2 | 0 | ser/thr phosphatase 2A regulatory subunit B |
| YGL019W | CKB1 | 6 | 0 | casein kinase II, beta subunit |
| YKR054C | DYN1 | 0 | 0 | dynein heavy chain, cytosolic |
| YMR176W | ECM5 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YEL046C | GLY1 | 2 | 0 | L-threonine aldolase, low-specific |
| YNL030W | HHF2 | 3 | 0 | histone H4 |
| YLL022C | HIF1 | 1 | 0 | HAT1 Interacting Factor 1 |
| YER065C | ICL1 | 1 | 0 | isocitrate lyase |
| YJR138W | IML1 | 0 | 0 | similarity to C.elegans hypothetical protein T08A11.1 (Class IV) |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YNL132W | KRE33 | 0 | 0 | similarity to A.ambisexualis antheridiol steroid receptor (Class III) |
| YMR021C | MAC1 | 3 | 0 | metal binding activator |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YOR188W | MSB1 | 0 | 0 | morphogenesis-related protein |
| YMR309C | NIP1 | 7 | 2 | associated with 40s ribosomal subunit |
| YJR132W | NMD5 | 6 | 0 | NAM7P interacting protein |
| YGR240C | PFK1 | 3 | 0 | 6-phosphofructokinase, alpha subunit |
| YDR300C | PRO1 | 1 | 0 | glutamate 5-kinase |
| YOR361C | PRT1 | 7 | 2 | translation initiation factor eIF3 subunit |
| YGR170W | PSD2 | 0 | 0 | phosphatidylserine decarboxylase 2 |
| YMR308C | PSE1 | 12 | 0 | beta karyopherin |
| YPR010C | RPA135 | 5 | 1 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPR110C | RPC40 | 6 | 1 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YBR079C | RPG1 | 2 | 2 | translation initiation factor eIF3 (p110 subunit) |
| YFR052W | RPN12 | 3 | 0 | 26S proteasome regulatory subunit |
| YER021W | RPN3 | 2 | 0 | 26S proteasome regulatory subunit |
| YDL097C | RPN6 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YOR261C | RPN8 | 1 | 0 | 26S proteasome regulatory subunit |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL007W | RPT2 | 0 | 0 | 26S proteasome regulatory subunit |
| YDR394W | RPT3 | 7 | 1 | 26S proteasome regulatory subunit |
| YOR117W | RPT5 | 7 | 1 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 0 | 26S proteasome regulatory subunit |
| YDR303C | RSC3 | 0 | 0 | similarity to transcriptional regulator proteins (Class III) |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YBL088C | TEL1 | 0 | 0 | telomere length control protein |
| YDL058W | USO1 | 0 | 0 | intracellular protein transport protein |
| YBL004W | 0 | 0 | weak similarity to Papaya ringspot virus polyprotein (Class III) |
| YFR006W | 0 | 0 | similarity to X-Pro dipeptidases (Class III) |
| YLR106C | 0 | 0 | similarity to Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene (Class III) |
| YLR239C | LIP2 | 2 | 0 | lipoic acid ligase |
| YOL054W | 0 | 0 | weak similarity to transcription factors (Class III) |
| YPR077C | 0 | 0 | questionable ORF (Class VI) |
| Cluster | CZ0205: |
| YMR078C | CTF18 | 0 | 0 | required for accurate chromosome transmission in mitosis and maintenance of normal telomere length |
| YJR068W | RFC2 | 2 | 1 | DNA replication factor C, 41 KD subunit |
| YBR087W | RFC5 | 3 | 1 | DNA replication factor C, 40 KD subunit |
| YNL088W | TOP2 | 8 | 0 | DNA topoisomerase II (ATP-hydrolysing) |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| YOR144C | EFD1 | 0 | 0 | weak similarity to human DNA-binding protein PO-GA and to bacterial H+-transporting ATP synthases (Class III) |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YLL040C | VPS13 | 0 | 0 | involved in regulating membrane traffic |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YMR181C | 5 | 0 | similarity to YPL229W (Class IV) |
| Cluster | CZ0206: |
| YPR025C | CCL1 | 4 | 2 | TFIIH subunit (transcription initiation factor), cyclin C component |
| YNL135C | FPR1 | 4 | 0 | peptidyl-prolyl cis-trans isomerase, FK506-binding protein |
| YLR005W | SSL1 | 0 | 0 | TFIIH subunit (transcription initiation factor), factor B |
| YDR311W | TFB1 | 24 | 1 | TFIIH subunit (transcription initiation factor), 75 kD |
| YPR016C | TIF6 | 1 | 0 | translation initiation factor 6 (eIF6) |
| YNL023C | FAP1 | 3 | 0 | similarity to D.melanogaster shuttle craft protein (Class III) |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YDL108W | KIN28 | 5 | 1 | cyclin-dependent ser/thr protein kinase |
| YDR337W | MRPS28 | 1 | 0 | ribosomal protein of the small subunit, mitochondrial |
| YBR081C | SPT7 | 13 | 0 | involved in alteration of transcription start site selection |
| YKL028W | TFA1 | 3 | 1 | TFIIE subunit (transcription initiation factor), 66 kD |
| YDR460W | TFB3 | 1 | 1 | TFIIH subunit (transcription/repair factor) |
| YPR056W | TFB4 | 1 | 0 | component of RNA polymerase transcription initiation TFIIH factor |
| YOR173W | 1 | 0 | strong similarity to YLR270W (Class IV) |
| Cluster | CZ0207: |
| YBR081C | SPT7 | 13 | 11 | involved in alteration of transcription start site selection |
| YDR167W | TAF25 | 22 | 13 | TFIID and SAGA subunit |
| YGL112C | TAF60 | 19 | 11 | TFIID and SAGA subunit |
| YBR198C | TAF90 | 16 | 11 | TFIID and SAGA subunit |
| YDR448W | ADA2 | 21 | 11 | general transcriptional adaptor or co-activator |
| YGR252W | GCN5 | 16 | 11 | histone acetyltransferase |
| YDR044W | HEM13 | 2 | 0 | coproporphyrinogen III oxidase |
| YPL254W | HFI1 | 13 | 11 | transcriptional coactivator |
| YGR264C | MES1 | 1 | 0 | methionyl-tRNA synthetase |
| YAL029C | MYO4 | 1 | 0 | myosin heavy chain, unconventional (class V) isoform |
| YDR176W | NGG1 | 23 | 12 | general transcriptional adaptor or co-activator |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| YOR151C | RPB2 | 2 | 0 | DNA-directed RNA polymerase II, 140 kDa chain |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YOL148C | SPT20 | 15 | 11 | member of the TBP class of SPT proteins that alter transcription site selection |
| YLR055C | SPT8 | 13 | 11 | transcriptional adaptor or co-activator |
| YGR274C | TAF145 | 2 | 1 | TFIID subunit (TBP-associated factor), 145 kD |
| YMR236W | TAF17 | 20 | 11 | TFIID and SAGA subunit |
| YML015C | TAF40 | 5 | 1 | TFIID subunit (TBP-associated factor), 40KD |
| YPL011C | TAF47 | 2 | 0 | component of the TBP-associated protein complex |
| YDR145W | TAF61 | 14 | 11 | TFIID and SAGA subunit |
| YMR227C | TAF67 | 0 | 0 | TFIID subunit (TBP-associated factor), 67 kD |
| YMR223W | UBP8 | 1 | 0 | similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P (Class III) |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YAL017W | FUN31 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| YML007W | YAP1 | 7 | 0 | transcriptional activator involved in oxidative stress response |
| YCL010C | 2 | 1 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL010C (Class IV) |
| YGL066W | 1 | 0 | similarity to human ATAXIN 7 (Class IV) |
| Cluster | CZ0208: |
| YMR128W | ECM16 | 0 | 0 | putative DEAH-box RNA helicase |
| YNL330C | RPD3 | 4 | 2 | histone deacetylase B |
| YOL004W | SIN3 | 8 | 2 | transcription regulatory protein |
| YDL076C | 1 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YMR072W | ABF2 | 1 | 0 | high mobility group protein |
| YIL035C | CKA1 | 4 | 3 | casein kinase II, catalytic alpha chain |
| YOR061W | CKA2 | 4 | 3 | casein kinase II alpha' chain |
| YGL019W | CKB1 | 6 | 3 | casein kinase II, beta subunit |
| YOR039W | CKB2 | 9 | 3 | casein kinase II beta' chain |
| YAL013W | DEP1 | 0 | 0 | regulator of phospholipid metabolism |
| YER088C | DOT6 | 1 | 0 | involved in derepression of telomeric silencing |
| YPR023C | EAF3 | 0 | 0 | similarity to human hypothetical protein (Class IV) |
| YBL003C | HTA2 | 0 | 0 | histone H2A.2 |
| YFR013W | IOC3 | 1 | 0 | similarity to YOL017W (Class IV) |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YOR174W | MED4 | 11 | 0 | transcription regulation mediator |
| YDL002C | NHP10 | 3 | 0 | Non-histone protein |
| YNL251C | NRD1 | 0 | 0 | involved in regulation of nuclear pre-mRNA abundance |
| YNL097C | PHO23 | 2 | 0 | involved in transcriptional regulation of PHO5 |
| YFR037C | RSC8 | 8 | 0 | subunit of the RSC complex |
| YMR263W | SAP30 | 5 | 1 | subunit of the histone deacetylase B complex |
| YIL084C | SDS3 | 1 | 0 | transcriptional regulator |
| YMR125W | STO1 | 1 | 0 | large subunit of the nuclear cap-binding protein complex CBC |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YCR084C | TUP1 | 3 | 0 | general transcription repressor |
| YPL139C | UME1 | 1 | 0 | negative regulator of meiosis |
| YDR207C | UME6 | 8 | 1 | negative transcriptional regulator |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YBR095C | 0 | 0 | weak similarity to hypothetical protein S. pombe (Class IV) |
| YMR075W | 1 | 0 | weak similarity to human Mi-2 protein (Class III) |
| YPL181W | 0 | 0 | weak similarity to YKR029C (Class IV) |
| Cluster | CZ0209: |
| YDL005C | MED2 | 7 | 5 | transcriptional regulation mediator |
| YOL135C | MED7 | 9 | 6 | member of RNA Polymerase II transcriptional regulation mediator complex |
| YBL093C | ROX3 | 0 | 0 | transcription factor |
| YBR253W | SRB6 | 1 | 1 | DNA-directed RNA polymerase II suppressor protein |
| YNL025C | SSN8 | 5 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog |
| YDR448W | ADA2 | 21 | 3 | general transcriptional adaptor or co-activator |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YNR010W | CSE2 | 2 | 1 | subunit of RNA polymerase II mediator complex |
| YFR019W | FAB1 | 0 | 0 | phosphatidylinositol 3-phosphate 5-kinase |
| YKL060C | FBA1 | 1 | 0 | fructose-bisphosphate aldolase |
| YOL051W | GAL11 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YGR252W | GCN5 | 16 | 3 | histone acetyltransferase |
| YPR070W | MED1 | 1 | 0 | component of RNA polymerase II holoenzyme and mediator subcomplex |
| YMR112C | MED11 | 3 | 2 | mediator complex subunit |
| YOR174W | MED4 | 11 | 7 | transcription regulation mediator |
| YHR058C | MED6 | 6 | 1 | RNA polymerase II transcriptional regulation mediator |
| YBR193C | MED8 | 13 | 7 | transcriptional regulation mediator |
| YKR095W | MLP1 | 0 | 0 | myosin-like protein related to USO1P |
| YHR147C | MRPL6 | 1 | 0 | ribosomal protein of the large subunit, mitochondrial |
| YGL151W | NUT1 | 0 | 0 | negative transcription regulator from artifical reporters |
| YPR168W | NUT2 | 3 | 0 | negative transcription regulator from artifical reporters |
| YGL025C | PGD1 | 8 | 5 | mediator complex subunit |
| YCR012W | PGK1 | 3 | 1 | phosphoglycerate kinase |
| YLR071C | RGR1 | 2 | 1 | DNA-directed RNA polymerase II holoenzyme subunit |
| YBR079C | RPG1 | 2 | 0 | translation initiation factor eIF3 (p110 subunit) |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YER157W | SEC34 | 2 | 0 | required for vesicle tethering to the yeast Golgi apparatus |
| YNL236W | SIN4 | 12 | 2 | global regulator protein |
| YBR081C | SPT7 | 13 | 3 | involved in alteration of transcription start site selection |
| YHR041C | SRB2 | 18 | 2 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YER022W | SRB4 | 101 | 8 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YGR104C | SRB5 | 1 | 1 | DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit |
| YDR308C | SRB7 | 4 | 2 | DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit |
| YCR081W | SRB8 | 1 | 0 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit |
| YNL189W | SRP1 | 140 | 0 | karyopherin-alpha or importin |
| YBR169C | SSE2 | 1 | 0 | heat shock protein of the HSP70 family |
| YPL042C | SSN3 | 1 | 1 | cyclin-dependent CTD kinase |
| YGL112C | TAF60 | 19 | 3 | TFIID and SAGA subunit |
| YKR059W | TIF1 | 1 | 0 | translation initiation factor 4A |
| YML007W | YAP1 | 7 | 1 | transcriptional activator involved in oxidative stress response |
| YIL077C | 1 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0210: |
| YBR236C | ABD1 | 0 | 0 | mRNA cap methyltransferase |
| YIL021W | RPB3 | 8 | 2 | DNA-directed RNA-polymerase II, 45 kDa |
| YDR404C | RPB7 | 2 | 1 | DNA-directed RNA polymerase II, 19 KD subunit |
| YGL070C | RPB9 | 44 | 0 | DNA-directed RNA polymerase II, 14.2 KD subunit |
| YHL021C | 3 | 0 | weak similarity to Pseudomonas gamma-butyrobetaine hydroxylase (Class III) |
| YPL129W | ANC1 | 2 | 0 | TFIIF subunit (transcription initiation factor), 30 kD |
| YPR180W | AOS1 | 4 | 0 | forms together with UBA2P a heterodimeric activating enzyme for SMT3P |
| YOL005C | RPB11 | 1 | 1 | DNA-directed RNA polymerase II subunit, 13.6 kD |
| YOR151C | RPB2 | 2 | 1 | DNA-directed RNA polymerase II, 140 kDa chain |
| YJL140W | RPB4 | 4 | 1 | DNA-directed RNA polymerase II, 32 kDa subunit |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YGR063C | SPT4 | 2 | 0 | transcription elongation protein |
| YML010W | SPT5 | 0 | 0 | transcription elongation protein |
| YGR186W | TFG1 | 0 | 0 | TFIIF subunit (transcription initiation factor), 105 kD |
| YGR005C | TFG2 | 2 | 0 | TFIIF subunit (transcription initiation factor), 54 kD |
| YDL115C | 0 | 0 | weak similarity to hypothetical protein D. melanogaster (Class IV) |
| Cluster | CZ0211: |
| YAL021C | CCR4 | 2 | 1 | transcriptional regulator |
| YDL165W | CDC36 | 6 | 0 | transcription factor |
| YCR093W | CDC39 | 4 | 2 | nuclear protein |
| YIL038C | NOT3 | 3 | 2 | general negative regulator of transcription, subunit 3 |
| YNR052C | POP2 | 8 | 1 | required for glucose derepression |
| YNL315C | ATP11 | 0 | 0 | F1F0-ATPase complex assembly protein |
| YGR134W | CAF130 | 1 | 0 | hypothetical protein (Class V) |
| YNL288W | CAF40 | 3 | 0 | strong similarity to C.elegans hypothetical protein (Class IV) |
| YDR188W | CCT6 | 0 | 0 | component of chaperonin-containing T-complex (zeta subunit) |
| YDL145C | COP1 | 0 | 0 | coatomer complex alpha chain of secretory pathway vesicles |
| YPL231W | FAS2 | 0 | 0 | fatty-acyl-CoA synthase, alpha chain |
| YGL195W | GCN1 | 1 | 0 | translational activator |
| YPR072W | NOT5 | 4 | 2 | component of the NOT protein complex |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YNL102W | POL1 | 4 | 0 | DNA-directed DNA polymerase alpha, 180 KD subunit |
| YBL035C | POL12 | 0 | 0 | DNA-directed DNA polymerase alpha, 70 KD subunit |
| YIR008C | PRI1 | 1 | 0 | DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase) |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YLR180W | SAM1 | 0 | 0 | S-adenosylmethionine synthetase 1 |
| YGL137W | SEC27 | 0 | 0 | coatomer complex beta' chain (beta'-cop) of secretory pathway vesicles |
| YOR110W | TFC7 | 5 | 0 | TFIIIC (transcription initiation factor) subunit, 55 kDa |
| YDR214W | 2 | 0 | similarity to hypothetical protein YNL281W (Class IV) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | CZ0212: |
| YMR167W | MLH1 | 4 | 4 | DNA mismatch repair protein |
| YOL090W | MSH2 | 5 | 4 | DNA mismatch repair protein |
| YDR097C | MSH6 | 3 | 3 | DNA mismatch repair protein |
| YNL082W | PMS1 | 4 | 4 | DNA mismatch repair protein |
| YAR007C | RFA1 | 4 | 3 | DNA replication factor A, 69 KD subunit |
| YMR234W | RNH1 | 0 | 0 | ribonuclease H |
| YNL021W | HDA1 | 3 | 0 | histone deacetylase A |
| YMR186W | HSC82 | 5 | 0 | heat shock protein |
| YLR347C | KAP95 | 35 | 0 | karyopherin-beta |
| YDR499W | LCD1 | 1 | 1 | cell cycle checkpoint protein |
| YBR136W | MEC1 | 2 | 1 | cell cycle checkpoint protein |
| YJR144W | MGM101 | 1 | 0 | mitochondrial genome maintenance protein |
| YIR002C | MPH1 | 2 | 0 | protection of the genome from spontaneous and chemically induced damage |
| YCR092C | MSH3 | 3 | 3 | DNA mismatch repair protein |
| YCR012W | PGK1 | 3 | 0 | phosphoglycerate kinase |
| YPR179C | PLO1 | 1 | 0 | similarity to PLO2P, weak similarity to C-terminal region of Nip80p (Class IV) |
| YDR295C | PLO2 | 0 | 0 | weak similarity to USO1P, YPR179C and fruit fly tropomyosin (Class III) |
| YOR323C | PRO2 | 0 | 0 | gamma-glutamyl phosphate reductase |
| YBR114W | RAD16 | 3 | 0 | nucleotide excision repair protein |
| YML032C | RAD52 | 5 | 3 | recombination and DNA repair protein |
| YNL312W | RFA2 | 3 | 3 | DNA replication factor A, 36 kDa subunit |
| YJL173C | RFA3 | 5 | 3 | DNA replication factor A, 13 KD subunit |
| YFR037C | RSC8 | 8 | 0 | subunit of the RSC complex |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YMR190C | SGS1 | 1 | 1 | DNA helicase |
| YJL138C | TIF2 | 2 | 0 | translation initiation factor eIF4A |
| YLR234W | TOP3 | 2 | 1 | DNA topoisomerase III |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YBR025C | 1 | 0 | strong similarity to Ylf1p (Class II) |
| YDL156W | 2 | 0 | weak similarity to Pas7p (Class III) |
| YDL225W | SHS1 | 5 | 0 | septin |
| YHR122W | 4 | 0 | similarity to hypothetical C. elegans protein F45G2.a (Class IV) |
| Cluster | CZ0213: |
| YJR063W | RPA12 | 18 | 1 | DNA-directed RNA polymerase I, 13.7 KD subunit |
| YOR341W | RPA190 | 0 | 0 | DNA-directed RNA polymerase I, 190 KD alpha subunit |
| YKL144C | RPC25 | 3 | 0 | DNA-direcred RNA polymerase III, 25 KD subunit |
| YNR003C | RPC34 | 4 | 2 | DNA-directed RNA polymerase III, 34 KD subunit |
| YPR110C | RPC40 | 6 | 2 | DNA-directed RNA polymerase I, III 40 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YGL156W | AMS1 | 2 | 0 | alpha-mannosidase |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YFR028C | CDC14 | 1 | 0 | dual specificity phosphatase |
| YDL160C | DHH1 | 13 | 0 | putative RNA helicase of the DEAD box family |
| YKL060C | FBA1 | 1 | 0 | fructose-bisphosphate aldolase |
| YDR005C | MAF1 | 3 | 0 | required for sorting of MOD5P |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YPR010C | RPA135 | 5 | 3 | DNA-directed RNA polymerase I, 135 KD subunit |
| YOR340C | RPA43 | 1 | 0 | DNA-directed RNA polymerase I, 36 KD subunit |
| YNL248C | RPA49 | 0 | 0 | DNA-directed RNA polymerase A (I) chain, 46 kDa |
| YOR210W | RPB10 | 2 | 0 | DNA-directed polymerase I, II, III 8.3 subunit |
| YBR154C | RPB5 | 2 | 0 | DNA-directed RNA polymerase I, II, III 25 KD subunit |
| YOR224C | RPB8 | 1 | 0 | DNA-directed RNA polymerase I, II, III 16 KD subunit |
| YDR045C | RPC11 | 1 | 0 | RNA polymerase III subunit C11, required for RNA cleavage activity and transcription termination |
| YNL113W | RPC19 | 7 | 2 | DNA-directed RNA polymerase I,III 16 KD subunit |
| YNL151C | RPC31 | 2 | 2 | DNA-directed RNA polymerase III, 31 KD subunit |
| YKR025W | RPC37 | 1 | 1 | Pol III transcription |
| YDL150W | RPC53 | 1 | 1 | DNA-directed RNA polymerase III, 47 KD subunit |
| YPR190C | RPC82 | 2 | 2 | DNA-directed RNA polymerase III, 82 KD subunit |
| YPR187W | RPO26 | 1 | 0 | DNA-directed RNA polymerase I, II, III 18 KD subunit |
| YFR037C | RSC8 | 8 | 0 | subunit of the RSC complex |
| YPR032W | SRO7 | 3 | 0 | polarized exocytosis by regulating SNARE function |
| YJL011C | 0 | 0 | weak similarity to chicken hypothetical protein (Class IV) |
| Cluster | CZ0214: |
| YER148W | SPT15 | 10 | 5 | the TATA-binding protein TBP |
| YGR274C | TAF145 | 2 | 2 | TFIID subunit (TBP-associated factor), 145 kD |
| YML098W | TAF19 | 4 | 2 | TFIID subunit (TBP-associated factor), 19 kD |
| YDR167W | TAF25 | 22 | 17 | TFIID and SAGA subunit |
| YGL112C | TAF60 | 19 | 10 | TFIID and SAGA subunit |
| YBR198C | TAF90 | 16 | 10 | TFIID and SAGA subunit |
| YCR042C | TSM1 | 1 | 1 | component of TFIID complex |
| YAL034C | FUN19 | 0 | 0 | similarity to hypothetical protein YOR338W (Class IV) |
| YDR448W | ADA2 | 21 | 11 | general transcriptional adaptor or co-activator |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YPL129W | ANC1 | 2 | 1 | TFIIF subunit (transcription initiation factor), 30 kD |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YGR252W | GCN5 | 16 | 10 | histone acetyltransferase |
| YDR044W | HEM13 | 2 | 0 | coproporphyrinogen III oxidase |
| YGL241W | KAP114 | 1 | 1 | Member of the karyopherin-beta family, nuclear import |
| YER110C | KAP123 | 2 | 0 | RAN-binding protein |
| YOR174W | MED4 | 11 | 0 | transcription regulation mediator |
| YGR264C | MES1 | 1 | 0 | methionyl-tRNA synthetase |
| YKL201C | MNN4 | 1 | 0 | regulates the mannosylphosphorylation |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YMR005W | MPT1 | 1 | 0 | required for protein synthesis |
| YHR023W | MYO1 | 2 | 0 | myosin-1 isoform (type II myosin) heavy chain |
| YDR176W | NGG1 | 23 | 11 | general transcriptional adaptor or co-activator |
| YDL014W | NOP1 | 3 | 0 | fibrillarin |
| YMR205C | PFK2 | 1 | 0 | 6-phosphofructokinase, beta subunit |
| YDL006W | PTC1 | 1 | 0 | protein serine/threonine phosphatase 2c |
| YOR151C | RPB2 | 2 | 0 | DNA-directed RNA polymerase II, 140 kDa chain |
| YDR427W | RPN9 | 1 | 0 | subunit of the regulatory particle of the proteasome |
| YDL140C | RPO21 | 4 | 0 | DNA-directed RNA polymerase II, 215 KD subunit |
| YOR117W | RPT5 | 7 | 0 | 26S proteasome regulatory subunit |
| YPL235W | RVB2 | 1 | 0 | RUVB-like protein |
| YOL004W | SIN3 | 8 | 0 | transcription regulatory protein |
| YNL236W | SIN4 | 12 | 0 | global regulator protein |
| YOL148C | SPT20 | 15 | 11 | member of the TBP class of SPT proteins that alter transcription site selection |
| YBR081C | SPT7 | 13 | 10 | involved in alteration of transcription start site selection |
| YLR055C | SPT8 | 13 | 10 | transcriptional adaptor or co-activator |
| YMR236W | TAF17 | 20 | 10 | TFIID and SAGA subunit |
| YML015C | TAF40 | 5 | 2 | TFIID subunit (TBP-associated factor), 40KD |
| YPL011C | TAF47 | 2 | 0 | component of the TBP-associated protein complex |
| YDR145W | TAF61 | 14 | 10 | TFIID and SAGA subunit |
| YML114C | TAF65 | 1 | 1 | TBP Associated Factor 65 KDa |
| YMR227C | TAF67 | 0 | 0 | TFIID subunit (TBP-associated factor), 67 kD |
| YPL128C | TBF1 | 2 | 0 | telomere TTAGGG repeat-binding factor 1 |
| YKL081W | TEF4 | 1 | 0 | translation elongation factor eEF1, gamma chain |
| YGR094W | VAS1 | 0 | 0 | valyl-tRNA synthetase |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YAL017W | FUN31 | 0 | 0 | similarity to ser/thr protein kinases (Class III) |
| YCL010C | 2 | 1 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL010C (Class IV) |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| YGL066W | 1 | 0 | similarity to human ATAXIN 7 (Class IV) |
| Cluster | CZ0215: |
| YKL139W | CTK1 | 2 | 2 | carboxy-terminal domain (CTD) kinase, alpha subunit |
| YJL006C | CTK2 | 2 | 2 | carboxy-terminal domain (CTD) kinase, beta subunit |
| YML112W | CTK3 | 3 | 2 | carboxy-terminal domain (CTD) kinase, gamma subunit |
| YBR169C | SSE2 | 1 | 0 | heat shock protein of the HSP70 family |
| Cluster | CZ0216: |
| YGR200C | ELP2 | 0 | 0 | 90 kDa subunit of elongator and elongating RNA polymerase II holoenzyme |
| YPL086C | ELP3 | 0 | 0 | subunit of elongator/RNAPII holoenzyme with histone acetylase activity |
| YLR384C | IKI3 | 1 | 0 | confers sensitivity to killer toxin |
| YPL101W | ELP4 | 0 | 0 | RNA polymerase II Elongator protein subunit |
| Cluster | CZ0217: |
| YGL237C | HAP2 | 8 | 2 | CCAAT-binding factor subunit |
| YBL021C | HAP3 | 4 | 2 | CCAAT-binding factor subunit |
| YOR358W | HAP5 | 7 | 2 | CCAAT-binding factor subunit |
| Cluster | CZ0218: |
| YNL021W | HDA1 | 3 | 0 | histone deacetylase A |
| YPR179C | PLO1 | 1 | 0 | similarity to PLO2P, weak similarity to C-terminal region of Nip80p (Class IV) |
| YDR295C | PLO2 | 0 | 0 | weak similarity to USO1P, YPR179C and fruit fly tropomyosin (Class III) |
| Cluster | CZ0219: |
| YOL068C | HST1 | 0 | 0 | silencing protein |
| YBR103W | SIF2 | 8 | 0 | SIR4P interacting protein |
| Cluster | CZ0220: |
| YBL002W | HTB2 | 2 | 0 | histone H2B.2 |
| YPR175W | DPB2 | 2 | 0 | DNA-directed DNA polymerase epsilon, subunit B |
| YDR121W | DPB4 | 1 | 0 | DNA polymerase II (epsilon) 4th subunit |
| YBR245C | ISW1 | 0 | 0 | strong similarity to D.melanogaster iswi protein (Class II) |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YGL241W | KAP114 | 1 | 0 | Member of the karyopherin-beta family, nuclear import |
| YPL082C | MOT1 | 0 | 0 | transcriptional accessory protein |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |
| YMR091C | NPL6 | 1 | 0 | nuclear protein localization factor |
| YNL262W | POL2 | 0 | 0 | DNA-directed DNA polymerase epsilon, catalytic subunit A |
| YOR207C | RET1 | 0 | 0 | DNA-directed RNA polymerase III, 130 KD subunit |
| YPR010C | RPA135 | 5 | 0 | DNA-directed RNA polymerase I, 135 KD subunit |
| YPR190C | RPC82 | 2 | 0 | DNA-directed RNA polymerase III, 82 KD subunit |
| YOR116C | RPO31 | 1 | 0 | DNA-directed RNA polymerase III, 160 KD subunit |
| YIL126W | STH1 | 2 | 0 | subunit of the RSC complex |
| YOL006C | TOP1 | 6 | 0 | DNA topoisomerase I |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YDR496C | PUF6 | 0 | 0 | similarity to hypothetical human and C.elegans proteins (Class IV) |
| Cluster | CZ0221: |
| YBR107C | IML3 | 2 | 0 | weak similarity to N.crassa chitin synthase (Class III) |
| YBR211C | AME1 | 4 | 0 | actin related protein |
| YDR254W | CHL4 | 2 | 0 | chromosome segregation protein |
| YPL018W | CTF19 | 1 | 0 | involved in chromosome segregation |
| YDR318W | MCM21 | 34 | 0 | involved in minichromosome maintenance |
| YJR135C | MCM22 | 1 | 0 | required for maintenance of chromosomes and minichromosomes |
| YDR383C | 8 | 0 | weak similarity to S.pombe paramyosin (Class III) |
| YLR381W | 1 | 0 | hypothetical protein (Class V) |
| Cluster | CZ0222: |
| YOR304W | ISW2 | 0 | 0 | strong similarity to Drosophila ISW1 and human SNF2P homolog (Class II) |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| Cluster | CZ0223: |
| YDL056W | MBP1 | 1 | 1 | transcription factor, subunit of the MBF factor |
| YLR182W | SWI6 | 6 | 1 | transcription factor |
| Cluster | CZ0224: |
| YKR048C | NAP1 | 9 | 3 | nucleosome assembly protein I |
| YDR507C | GIN4 | 6 | 1 | ser/thr protein kinase |
| YOL012C | HTZ1 | 2 | 0 | evolutionarily conserved member of the histone H2A F/Z family of histone variants |
| YGL241W | KAP114 | 1 | 0 | Member of the karyopherin-beta family, nuclear import |
| YCL024W | KCC4 | 1 | 1 | kinase coordinate cell cycle progression with the organization of the peripheralcytoskeleton |
| YIL094C | LYS12 | 1 | 0 | homo-isocitrate dehydrogenase |
| YJR045C | SSC1 | 4 | 0 | mitochondrial heat shock protein 70-related protein |
| YNL078W | JIP1 | 7 | 2 | hypothetical protein (Class V) |
| YOL070C | 3 | 1 | hypothetical protein (Class V) |
| YDR381W | YRA1 | 1 | 0 | RNA annealing protein |
| Cluster | CZ0225: |
| YGL091C | NBP35 | 1 | 0 | nucleotide-binding protein |
| YIL129C | TAO3 | 1 | 0 | Transcriptional Activator of OCH1 |
| Cluster | CZ0226: |
| YJL115W | ASF1 | 0 | 0 | anti-silencing protein |
| YJR140C | HIR3 | 0 | 0 | involved in cell cycle regulation of histone transcription |
| YIL070C | MAM33 | 2 | 0 | mitochondrial acidic matrix protein |
| YPL153C | RAD53 | 2 | 0 | ser/thr/tyr protein kinase |
| YJL026W | RNR2 | 2 | 1 | ribonucleoside-diphosphate reductase, small subunit |
| YGR180C | RNR4 | 2 | 1 | ribonucleotide reductase small subunit |
| Cluster | CZ0227: |
| YBL017C | PEP1 | 0 | 0 | vacuolar protein sorting/targeting protein |
| YPL049C | DIG1 | 8 | 0 | MAP kinase-associated protein, down-regulator of invasive growth and mating |
| YDR432W | NPL3 | 1 | 0 | nucleolar protein |
| Cluster | CZ0228: |
| YBL035C | POL12 | 0 | 0 | DNA-directed DNA polymerase alpha, 70 KD subunit |
| YBR084W | MIS1 | 0 | 0 | C1-tetrahydrofolate synthase precursor, mitochondrial |
| YNL102W | POL1 | 4 | 0 | DNA-directed DNA polymerase alpha, 180 KD subunit |
| YIR008C | PRI1 | 1 | 0 | DNA-directed DNA polymerase alpha 48kDa subunit (DNA primase) |
| YKL045W | PRI2 | 0 | 0 | DNA-directed DNA polymerase alpha , 58 KD subunit (DNA primase) |
| YOR217W | RFC1 | 0 | 0 | DNA replication factor C, 95 KD subunit |
| YNL290W | RFC3 | 1 | 1 | DNA replication factor C, 40 kDa subunit |
| YOL094C | RFC4 | 1 | 1 | DNA replication factor C, 37 kDa subunit |
| YBR087W | RFC5 | 3 | 0 | DNA replication factor C, 40 KD subunit |
| YDL058W | USO1 | 0 | 0 | intracellular protein transport protein |
| Cluster | CZ0229: |
| YLR196W | PWP1 | 3 | 0 | similarity to human IEF SSP 9502 protein (Class IV) |
| YFL039C | ACT1 | 22 | 0 | actin |
| YLR449W | FPR4 | 4 | 0 | nucleolar peptidylprolyl cis-trans isomerase (PPIase) |
| YPL126W | NAN1 | 1 | 0 | weak similarity to fruit fly TFIID subunit p85 (Class III) |
| YEL055C | POL5 | 0 | 0 | DNA polymerase V |
| YFL008W | SMC1 | 6 | 0 | chromosome segregation protein |
| YPL207W | 1 | 0 | similarity to hypthetical proteins from A. fulgidus, M. thermoautotrophicum and M. jannaschii (Class IV) |
| Cluster | CZ0230: |
| YBR114W | RAD16 | 3 | 0 | nucleotide excision repair protein |
| YOL086C | ADH1 | 1 | 0 | alcohol dehydrogenase I |
| YJR077C | MIR1 | 2 | 0 | phosphate transport protein, mitochondrial (MCF) |
| YLR044C | PDC1 | 1 | 0 | pyruvate decarboxylase, isozyme 1 |
| YPL154C | PEP4 | 2 | 0 | aspartyl protease |
| YGR192C | TDH3 | 1 | 0 | glyceraldehyde-3-phosphate dehydrogenase 3 |
| YOR332W | VMA4 | 1 | 0 | H+-ATPase V1 domain 27 KD subunit, vacuolar |
| YKR001C | VPS1 | 0 | 0 | member of the dynamin family of GTPases |
| YOL097C | WRS1 | 0 | 0 | tryptophan--tRNA ligase |
| YMR315W | 1 | 0 | similarity to hypothetical S. pombe protein (Class IV) |
| Cluster | CZ0231: |
| YER171W | RAD3 | 0 | 0 | DNA helicase/ATPase |
| YMR116C | ASC1 | 0 | 0 | 40S small subunit ribosomal protein |
| YMR012W | CLU1 | 0 | 0 | translation initiation factor eIF3 (p135 subunit) |
| YHL030W | ECM29 | 0 | 0 | involved in cell wall biogenesis and architecture |
| YGL195W | GCN1 | 1 | 1 | translational activator |
| YFR009W | GCN20 | 1 | 1 | positive effector of GCN2P |
| YIL128W | MET18 | 1 | 0 | involved in NER repair and RNA polymerase II transcription |
| YDR394W | RPT3 | 7 | 0 | 26S proteasome regulatory subunit |
| YGL048C | RPT6 | 4 | 0 | 26S proteasome regulatory subunit |
| YML124C | TUB3 | 1 | 0 | alpha-3 tubulin |
| YNL064C | YDJ1 | 2 | 0 | mitochondrial and ER import protein |
| Cluster | CZ0232: |
| YMR139W | RIM11 | 6 | 0 | ser/thr protein kinase |
| YKR048C | NAP1 | 9 | 0 | nucleosome assembly protein I |