Uzri D and Gehrke L.
The 3' untranslated region of hepatitis C virus RNA is a potent activator of innate immune signaling. Submitted for publication.

Gomila R and Gehrke L.
Biochemical approaches for characterizing RNA-protein complexes in preparation for high resolultion structure analysis. In: Plant Virology Protocols (2008). Nagy, P., editor.

Reichert V, Choi M, Petrillo JE and Gehrke L.
Alfalfa mosaic virus coat protein bridges RNA and RNA-dependent RNA polymerase in vitro. Virology 2007; 364: 214-226.

Boyce M, Scott F, Guogas LM, and Gehrke L..
Base-pairing potential identified by in vitro selection predicts the kinked RNA backbone observed in the crystal structure of the alfalfa mosaic virus RNA-coat protein complex. J. Mol. Recognit. 19: 68-78.

Guogas LM, LaForest SM, Gehrke L.
The activation of replication by alfalfa mosaic virus coat protein is concentration dependent. J. Virol. 2005; 79: 5752-5761.

Petrillo JE, Rocheleau GA, Kelley-Clarke B, and Gehrke L.
An evaluation of the conformational switch model for alfalfa mosaic virus replication. J. Virol. 2005; 79: 5743-5751.

Rocheleau G, Petrillo J, Guogas L, Gehrke L.
Degenerate in vitro genetic selection reveals mutations that diminish alfalfa mosaic virus RNA replication without affecting coat protein binding.
J Virol. 2004 Aug;78(15):8036-46.

Laforest SM, Gehrke L.
Spatial determinants of the alfalfa mosaic virus coat protein binding site.
RNA. 2004 Jan;10(1):48-58.

Ansel-McKinney P, Gehrke L.
RNA determinants of a specific RNA-coat protein peptide interaction in alfalfa mosaic virus: conservation of homologous features in ilarvirus RNAs.
J Mol Biol. 1998 May 15;278(4):767-85.

Swanson MM, Ansel-McKinney P, Houser-Scott F, Yusibov V, Loesch-Fries LS, Gehrke L.
Viral coat protein peptides with limited sequence homology bind similar domains of alfalfa mosaic virus and tobacco streak virus RNAs.
J Virol. 1998 Apr;72(4):3227-34.

MacBeth KJ, Ro YT, Gehrke L, Patterson JL.
Cleavage site mapping and substrate-specificity of Leishmaniavirus 2-1 capsid endoribonuclease activity.
J Biochem (Tokyo). 1997 Jul;122(1):193-200.

Hann LE, Webb AC, Cai JM, Gehrke L.
Identification of a competitive translation determinant in the 3' untranslated region of alfalfa mosaic virus coat protein mRNA.
Mol Cell Biol. 1997 Apr;17(4):2005-13.

Houser-Scott F, Ansel-McKinney P, Cai JM, Gehrke L.
In vitro genetic selection analysis of alfalfa mosaic virus coat protein binding to 3'-terminal AUGC repeats in the viral RNAs.
J Virol. 1997 Mar;71(3):2310-9.

Ansel-McKinney P, Scott SW, Swanson M, Ge X, Gehrke L.
A plant viral coat protein RNA binding consensus sequence contains a crucial arginine.
EMBO J. 1996 Sep 16;15(18):5077-84. Erratum in: EMBO J 1996 Dec 16;15(24):7188-9.

Rousseau D, Kaspar R, Rosenwald I, Gehrke L, Sonenberg N.
Translation initiation of ornithine decarboxylase and nucleocytoplasmic transport of cyclin D1 mRNA are increased in cells overexpressing eukaryotic initiation factor 4E.
Proc Natl Acad Sci U S A. 1996 Feb 6;93(3):1065-70.

Rosenwald IB, Kaspar R, Rousseau D, Gehrke L, Leboulch P, Chen JJ, Schmidt EV, Sonenberg
N, London IM.
Eukaryotic translation initiation factor 4E regulates expression of cyclin D1 at transcriptional and post-transcriptional levels.
J Biol Chem. 1995 Sep 8;270(36):21176-80.

Hann LE, Gehrke L.
mRNAs containing the unstructured 5' leader sequence of alfalfa mosaic virus RNA 4 translate inefficiently in lysates from poliovirus-infected HeLa cells.
J Virol. 1995 Aug;69(8):4986-93.

Kaspar RL, Gehrke L.
Peripheral blood mononuclear cells stimulated with C5a or lipopolysaccharide to synthesize equivalent levels of IL-1 beta mRNA show unequal IL-1 beta protein accumulation but similar polyribosome profiles.
J Immunol. 1994 Jul 1;153(1):277-86.

Houser-Scott F, Baer ML, Liem KF Jr, Cai JM, Gehrke L.
Nucleotide sequence and structural determinants of specific binding of coat protein or coat protein peptides to the 3' untranslated region of alfalfa mosaic virus RNA 4.
J Virol. 1994 Apr;68(4):2194-205.

Baer ML, Houser F, Loesch-Fries LS, Gehrke L.
Specific RNA binding by amino-terminal peptides of alfalfa mosaic virus coat protein.
EMBO J. 1994 Feb 1;13(3):727-35.