draw-mhmm [options] <HMM file>
The program draw-mhmm converts a given hidden Markov model as produced by mhmm into a format suitable for input to the graphviz program from AT&T Research.
An HMM as produced by mhmm must be provided. If the filename is given as '-', then 'mhmms' will attempt to read the HMM from standard input.
The program writes to standard output a description of the HMM in graphviz format.
| Option | Parameter | Description | Default Behaviour |
|---|---|---|---|
| General Options | |||
| --mintrans | value | Only include in the graph edges whose transition probabilities exceed the given value. | |
| --consensus | Print consensus along with motif id. | ||