******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.11.4 (Release date: Thu Mar 30 17:02:08 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= memechip_example_output_files/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:157319654-157319754 1.0000 100 chr8:24254794-24254894 1.0000 100 chr15:76778489-76778589 1.0000 100 chr6:57695285-57695385 1.0000 100 chr10:59336303-59336403 1.0000 100 chr1:43307688-43307788 1.0000 100 chr4:111175597-111175697 1.0000 100 chr19:47458492-47458592 1.0000 100 chr13:73612723-73612823 1.0000 100 chr7:16507687-16507787 1.0000 100 chr6:132413556-132413656 1.0000 100 chr10:110604367-11060446 1.0000 100 chr3:100351338-100351438 1.0000 100 chr2:78556314-78556414 1.0000 100 chr18:65586913-65587013 1.0000 100 chr4:8631653-8631753 1.0000 100 chr11:4232024-4232124 1.0000 100 chr4:143002326-143002426 1.0000 100 chr14:79702842-79702942 1.0000 100 chr3:145253490-145253590 1.0000 100 chr11:69793283-69793383 1.0000 100 chr4:135745624-135745724 1.0000 100 chr1:136638480-136638580 1.0000 100 chr10:126642275-12664237 1.0000 100 chr18:23868475-23868575 1.0000 100 chr6:134934721-134934821 1.0000 100 chr17:12397641-12397741 1.0000 100 chr11:44322387-44322487 1.0000 100 chr7:106679806-106679906 1.0000 100 chr17:26651345-26651445 1.0000 100 chr12:78031163-78031263 1.0000 100 chr5:37127173-37127273 1.0000 100 chr19:5845897-5845997 1.0000 100 chr1:183078713-183078813 1.0000 100 chr3:102933242-102933342 1.0000 100 chr16:91804487-91804587 1.0000 100 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1.0000 100 chr3:153454528-153454628 1.0000 100 chr3:138480014-138480114 1.0000 100 chr2:103728069-103728169 1.0000 100 chr9:107982357-107982457 1.0000 100 chr8:87494748-87494848 1.0000 100 chr1:135846955-135847055 1.0000 100 chr13:76003197-76003297 1.0000 100 chr4:154285743-154285843 1.0000 100 chr10:111261809-11126190 1.0000 100 chr11:101309431-10130953 1.0000 100 chr4:154862418-154862518 1.0000 100 chr7:56247540-56247640 1.0000 100 chr11:86476946-86477046 1.0000 100 chr3:151777794-151777894 1.0000 100 chr12:116856335-11685643 1.0000 100 chr7:134716500-134716600 1.0000 100 chr13:56459264-56459364 1.0000 100 chr13:23643343-23643443 1.0000 100 chr2:37405045-37405145 1.0000 100 chr7:16987193-16987293 1.0000 100 chr11:101176806-10117690 1.0000 100 chr6:38874024-38874124 1.0000 100 chr1:134264176-134264276 1.0000 100 chr13:113639368-11363946 1.0000 100 chr11:84636991-84637091 1.0000 100 chr10:20961508-20961608 1.0000 100 chr3:19087305-19087405 1.0000 100 chr4:122963963-122964063 1.0000 100 chr11:94858857-94858957 1.0000 100 chr7:106135436-106135536 1.0000 100 chr18:74156784-74156884 1.0000 100 chr16:3349853-3349953 1.0000 100 chr11:6313292-6313392 1.0000 100 chr12:110018190-11001829 1.0000 100 chr18:62325790-62325890 1.0000 100 chr8:107486055-107486155 1.0000 100 chr9:57618592-57618692 1.0000 100 chr7:6315630-6315730 1.0000 100 chr7:151917812-151917912 1.0000 100 chr9:70682445-70682545 1.0000 100 chr5:64826640-64826740 1.0000 100 chr6:35303479-35303579 1.0000 100 chr5:38900628-38900728 1.0000 100 chr2:131039490-131039590 1.0000 100 chr9:107206716-107206816 1.0000 100 chr12:85791923-85792023 1.0000 100 chr7:101244827-101244927 1.0000 100 chr11:80597916-80598016 1.0000 100 chr12:90222445-90222545 1.0000 100 chr9:42938266-42938366 1.0000 100 chr17:28960250-28960350 1.0000 100 chr8:73222226-73222326 1.0000 100 chr6:120124362-120124462 1.0000 100 chr5:27985058-27985158 1.0000 100 chr13:20241986-20242086 1.0000 100 chr17:84209563-84209663 1.0000 100 chr14:55690869-55690969 1.0000 100 chr1:135693774-135693874 1.0000 100 chr7:20321984-20322084 1.0000 100 chr7:86884669-86884769 1.0000 100 chr11:86427474-86427574 1.0000 100 chr1:173447612-173447712 1.0000 100 chr19:24348711-24348811 1.0000 100 chr8:19899369-19899469 1.0000 100 chr1:155596604-155596704 1.0000 100 chr14:70865965-70866065 1.0000 100 chr17:24339800-24339900 1.0000 100 chr7:82905682-82905782 1.0000 100 chr7:38977097-38977197 1.0000 100 chr7:149571620-149571720 1.0000 100 chr11:107308642-10730874 1.0000 100 chr14:79987350-79987450 1.0000 100 chr1:88208801-88208901 1.0000 100 chr11:107258862-10725896 1.0000 100 chr2:52304246-52304346 1.0000 100 chr5:77087235-77087335 1.0000 100 chr14:55043396-55043496 1.0000 100 chr14:41760572-41760672 1.0000 100 chr8:73367284-73367384 1.0000 100 chr7:148976464-148976564 1.0000 100 chr5:143814327-143814427 1.0000 100 chr9:44096484-44096584 1.0000 100 chr14:69922786-69922886 1.0000 100 chr18:75107911-75108011 1.0000 100 chr11:96817328-96817428 1.0000 100 chr15:62052572-62052672 1.0000 100 chr13:45622654-45622754 1.0000 100 chr17:45710228-45710328 1.0000 100 chr3:144332973-144333073 1.0000 100 chr2:152650539-152650639 1.0000 100 chr17:84179513-84179613 1.0000 100 chr11:69186639-69186739 1.0000 100 chr9:108709855-108709955 1.0000 100 chr7:28233709-28233809 1.0000 100 chr1:22562529-22562629 1.0000 100 chr6:38866491-38866591 1.0000 100 chr17:26079523-26079623 1.0000 100 chr19:4558363-4558463 1.0000 100 chr17:43466516-43466616 1.0000 100 chr3:151860091-151860191 1.0000 100 chr13:45499432-45499532 1.0000 100 chr3:104843903-104844003 1.0000 100 chr13:57679176-57679276 1.0000 100 chr15:98860004-98860104 1.0000 100 chr19:8797698-8797798 1.0000 100 chr11:89087921-89088021 1.0000 100 chr7:38970373-38970473 1.0000 100 chr11:97793524-97793624 1.0000 100 chr6:28617037-28617137 1.0000 100 chr13:107890787-10789088 1.0000 100 chr3:60589028-60589128 1.0000 100 chr7:148318026-148318126 1.0000 100 chr15:80573348-80573448 1.0000 100 chr5:129513004-129513104 1.0000 100 chr6:56190305-56190405 1.0000 100 chr6:72324692-72324792 1.0000 100 chr16:8686807-8686907 1.0000 100 chr4:111173961-111174061 1.0000 100 chr13:113537909-11353800 1.0000 100 chr6:34857294-34857394 1.0000 100 chr8:98213263-98213363 1.0000 100 chr15:27299345-27299445 1.0000 100 chr2:31917150-31917250 1.0000 100 chr10:59465793-59465893 1.0000 100 chr18:32716207-32716307 1.0000 100 chr3:96232774-96232874 1.0000 100 chr6:131327330-131327430 1.0000 100 chr18:34136392-34136492 1.0000 100 chr13:104969483-10496958 1.0000 100 chr4:154282316-154282416 1.0000 100 chr4:134960760-134960860 1.0000 100 chr8:51109537-51109637 1.0000 100 chr15:83253022-83253122 1.0000 100 chr5:118929925-118930025 1.0000 100 chr15:58828418-58828518 1.0000 100 chr11:105013712-10501381 1.0000 100 chr7:87847379-87847479 1.0000 100 chr13:114606034-11460613 1.0000 100 chr4:46419777-46419877 1.0000 100 chr5:33616212-33616312 1.0000 100 chr11:90524330-90524430 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme memechip_example_output_files/seqs-sampled -oc memechip_example_output_files/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile memechip_example_output_files/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.249 C 0.251 G 0.251 T 0.249 Background letter frequencies (from memechip_example_output_files/background): A 0.256 C 0.244 G 0.244 T 0.256 ******************************************************************************** ******************************************************************************** MOTIF WGGGTGTGGYYS MEME-1 width = 12 sites = 225 llr = 2169 E-value = 3.4e-225 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 4::::::11:21 pos.-specific C ::::2:::1633 probability G 1aaa:a398:14 matrix T 5:::8:7:1342 bits 2.0 * * 1.8 *** * 1.6 *** * 1.4 *** * * Relative 1.2 ***** * Entropy 1.0 ***** ** (13.9 bits) 0.8 ********* 0.6 ********** 0.4 ********** 0.2 ************ 0.0 ------------ Multilevel TGGGTGTGGCTG consensus A G TCC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr17:28960250-28960350 + 25 1.57e-07 GAGGTAGCTC TGGGTGTGGCTG ACCCTAGGCC chr6:86027770-86027870 + 27 1.57e-07 CATGGCAGAC AGGGTGTGGCCG AGTCTCTTGT chr5:65255863-65255963 - 6 1.57e-07 GTGAGAATGT TGGGTGTGGCTG CCCAG chr17:43466516-43466616 - 24 2.62e-07 CAAGGCAAGC TGGGTGTGGCCC TCCCAGGGTT chr6:38866491-38866591 + 73 2.62e-07 AGATAGAGAA AGGGTGTGGCTG TCNNNNNNNN chr13:3866264-3866364 - 69 2.62e-07 CCAACCCAGA AGGGTGTGGCTG AACGGCTAGG chr13:112833728-11283382 + 36 2.62e-07 AGTTCATGGC AGGGTGTGGCTG CTTCATCATC chr9:112905109-112905209 + 85 2.62e-07 NNNNNNNNNG TGGGTGTGGCCC CTAN chr15:76083898-76083998 - 51 2.62e-07 GCCAAGGTAA AGGGTGTGGCTG AGCAAGCGCA chr16:91352912-91353012 - 61 2.62e-07 CCAGTGACTC AGGGTGTGGCTG CTGAGCATGG chr19:53259935-53260035 + 12 2.62e-07 CCAGCTCCTG TGGGTGTGGCCC ACCACATTCG chr15:58828418-58828518 - 74 3.68e-07 TGCCTCTGGC AGGGTGTGGCCC ATCACATGGC chr7:151917812-151917912 + 23 3.68e-07 CCCTGCCTTC TGGGTGTGGCTC CCTGCAGCAG chr5:45951563-45951663 - 67 3.68e-07 TTGCCAGACC TGGGTGTGGCTC TGGGGCGTGT chr3:51492456-51492556 + 28 3.68e-07 AGCAGGAGTA TGGGTGTGGCTC TTATAAACCG chr9:21940047-21940147 - 9 3.68e-07 CCTGGACACT TGGGTGTGGCTC AGTGGTAG chr18:61379739-61379839 - 58 3.68e-07 GAAGAGAGAA TGGGTGTGGCTC CTTTTCACCC chr1:136638480-136638580 - 12 3.68e-07 GCCCATGTAG AGGGTGTGGCCC CTGCTTAGAG chr7:28233709-28233809 - 41 4.22e-07 AAGGCTAGCA AGGGTGTGGCTC TTTATCTGGA chr4:43977109-43977209 + 32 4.76e-07 TTCCCCTGGC TGGGTGTGGTCG CCAGTGATAA chr11:90524330-90524430 + 26 6.89e-07 AGGCCCGAAG TGGGTGTGGCAG GTGATAGGCT chr6:72324692-72324792 + 84 6.89e-07 ATCAAGAAGT AGGGTGTGGTCG TGCTT chr5:64826640-64826740 - 84 6.89e-07 TGCAC TGGGTGTGGCAG TGGGTGGGGC chr13:3862101-3862201 + 20 6.89e-07 GGGAGACGCC TGGGTGTGGTTG CTCAGCCAAG chr17:84179513-84179613 + 44 1.06e-06 GATCTGGTGC TGGGTGTGGCCT GTATGGACCT chr9:44096484-44096584 - 61 1.06e-06 ACTTTAGGGT TGGGTGGGGCTG CGCTCCAAAG chr11:86427474-86427574 - 27 1.06e-06 CTAGTCACTG TGGGTGGGGCTG GGAAATGGAA chr7:19832205-19832305 - 35 1.06e-06 TCAGACATCT TGGGTGTGGCCT GGGGCTTTTC chr7:25993967-25994067 - 47 1.06e-06 GTCACCTGGC AGGGTGTGGTTG GCTTAGGTTC chr1:169314206-169314306 - 18 1.06e-06 GGAACAACCC AGGGTGTGGCAG AGGCTGCCTG chr7:139969682-139969782 - 24 1.06e-06 ACTGGGGTGC TGGGTGTGGCCT CTGAGGCTGA chr5:33616212-33616312 - 53 1.49e-06 AGTTTGTTTC AGGGTGTGGCGG GGTAAGGCCC chr17:26079523-26079623 - 88 1.49e-06 A AGGGTGTGGTCC CTTAGTGTTC chr11:69186639-69186739 + 67 1.49e-06 CCCTTCTCAG TGGGTGTGGTTC TTATCTCCTC chr14:41760572-41760672 - 66 1.49e-06 TTGACTCCTT TGGGTGTGGCAC AAACAACAAA chr11:107308642-10730874 - 81 1.49e-06 TGGGGTAC AGGGTGTGGTCC CTAAGTTTGA chr5:27985058-27985158 - 77 1.49e-06 GATGGGCAGT AGGGTGTGGCCT CAGTGTTATC chr9:107206716-107206816 + 23 1.49e-06 GTGATAACTT TGGGTGTGGTTC ACTCCCAATA chr11:101309431-10130953 + 72 1.49e-06 GCTCCGCCCA AGGGTGGGGCTG TATGCTCAGA chr15:82060181-82060281 - 11 1.49e-06 ACTGATAAAC AGGGTGGGGCTG GAAGGATGCA chr9:7790419-7790519 + 74 1.49e-06 GCTGGTAGTT TGGGTGTGGCAC AGCAATGTTA chr2:25742739-25742839 + 37 1.49e-06 TGGCTCTTCC TGGGTGTGGCAC TGGGGCATCA chr5:139858100-139858200 - 38 1.49e-06 TAAAAAAACC TGGGTGTGGCTT CACCTGCAGG chr12:80012615-80012715 - 17 1.49e-06 GCCTCTCCCG AGGGTGGGGCTG GGTGTGTAAA chr1:133343881-133343981 + 39 1.49e-06 GGGTAGTTGT AGGGTGTGGCCT GATTGATCAT chr11:96817328-96817428 + 79 1.81e-06 GGGAGAGAAA AGGGTGTGGTTC AGGAAAGGAA chr9:108243078-108243178 - 30 1.81e-06 AGATATTTAA AGGGTGGGGCCC AAGCAGTAGC chr4:128532891-128532991 - 65 1.81e-06 TAGTGGGCAG AGGGTGTGGCTT TCAGAATCTT chr11:90547828-90547928 - 72 1.81e-06 CCTTGGGGAC AGGGTGTGGCAC CAGGGTGTAT chr17:85277577-85277677 - 84 1.96e-06 GCTCC TGGGTGTGGCCA GCAAGGGCCT chr10:57527583-57527683 - 33 1.96e-06 GCTGTCTCTA TGGGTGTGGCCA TAGAACTGTC chr17:45884714-45884814 - 47 2.44e-06 TCCTACCTCA TGGGTGTGGTAG CTTGGAGATC chr6:81915767-81915867 + 1 2.44e-06 . GGGGTGTGGCCG GACGGTGGCT chr14:79702842-79702942 - 53 2.44e-06 CTAGGGAGGC AGGGTGTGGCTA ACTTCAAAGT chr6:34857294-34857394 - 17 2.91e-06 CTGATAAATT TGGGTGTGGTGG AGGCCCAGCC chr13:113537909-11353800 - 63 2.91e-06 CTGGCAGACC TGGGTGGGGCAG CCAGACATCT chr8:74937708-74937808 - 66 2.91e-06 TCTGCATCCC AGGGCGTGGCTG CATGTTCACA chr19:6300359-6300459 + 2 2.91e-06 C TGGGTGGGGTTG GTTAGAGCCA chr5:30289967-30290067 - 53 2.91e-06 GTGCTCTAGG TGGGTGTGGTGG CCAGACTCCA chr12:102194281-10219438 - 21 2.91e-06 AGCTGTTGAC TGGGTGGGGTTG GGCTTGATAA chr11:115367838-11536793 - 80 2.91e-06 TGTCAGCAG TGGGTGTGGTGG TGACAGACGT chr15:81700365-81700465 - 34 2.91e-06 TGAGCCAAAC TGGGTGTGGTCT AATAAAGAGC chr12:70394724-70394824 - 54 2.91e-06 CAGATAGGAG TGGGTGGGGCAG AGGAAAGTTA chr1:155596604-155596704 + 14 3.60e-06 CTAGCTGCTC TGGGTGGGGCGG AGAGCCAGTG chr1:135693774-135693874 - 4 3.60e-06 TGAAGAGGAT AGGGTGGGGCAG GTA chr10:111261809-11126190 + 46 3.60e-06 GGGAGCAGGA AGGGTGTGGTCT GCCAAAGTCA chr5:138127195-138127295 + 42 3.60e-06 CTTTTGCTAC AGGGTGTGGTCT GCAAGAGCAA chr13:35887679-35887779 - 46 3.60e-06 CAAGGGAGGG AGGGTGGGGCAG GGAGAAGGCT chr8:107823856-107823956 + 31 3.60e-06 TGATAAGTTC AGGGTGGGGCAG GTAGGGGAGG chr16:49776998-49777098 - 88 3.60e-06 G AGGGTGTGGTGG CAACTATTAA chr15:83139083-83139183 - 22 3.60e-06 TGGAGGCCAG AGGGTGTGGTGG ATAAAACCCA chr3:145253490-145253590 - 61 3.60e-06 ACAGTCAGCA AGGGTGTGGTGG CAGTTTATCT chr10:110604367-11060446 + 36 3.60e-06 TCTGAGACGC TGGGTGTGGCAT TTGCTGGTGA chr3:84162551-84162651 + 66 4.30e-06 GGTGAGGGAA GGGGTGTGGCTC ATGCAAAATG chr12:27135942-27136042 - 81 4.30e-06 GAGCTAGC AGGGTGGGGCCT GGCTGAATGG chr10:40726422-40726522 + 57 4.30e-06 TTGCATACTC TGGGTGGGGCAC CATCTGGCAG chr13:112863643-11286374 - 74 4.67e-06 TATGCAGATT TGGGTGTGGTCA GAGTGTGAGC chr9:113850419-113850519 + 36 4.67e-06 GAAACAGCTT TGGGTGTGGTCA TGCTAGGGAG chr15:91082414-91082514 - 45 4.67e-06 CTCTGCTGGG AGGGTGTGGTGC CTTTTATCTC chr18:23868475-23868575 + 66 4.67e-06 GTAGGTAGAA AGGGTGTGGTGC CCTGCCTGCT chr17:25039617-25039717 + 42 4.99e-06 CACTGTCACC AGGGTGTGGTCA CTTAACTGCA chr14:63796625-63796725 - 49 4.99e-06 ATCAAATTCT AGGGTGTGGTCA TCGCGCCAGG chr10:60612188-60612288 + 19 5.52e-06 TACTCAAATG AGGGTGTGGTTA GCAATGGCAT chr8:87362361-87362461 - 56 5.52e-06 AGCCTTAGGC AGGGTGGGGCCA TGATGGGGCA chr7:149571620-149571720 - 37 6.19e-06 CCACCTGACT GGGGTGTGGTTG GTGAGGGAAA chr2:24832339-24832439 + 44 6.19e-06 AAGAACATAG AGGGCGTGGTTG CTGTGCTCTT chr7:99891351-99891451 - 20 6.19e-06 ATTCCTAAAG GGGGTGTGGTTG ACCCAAAGTC chr4:154285743-154285843 + 29 7.12e-06 AGATGGAGTT GGGGTGGGGCTG GGTGGGACTG chr8:87494748-87494848 + 80 7.12e-06 GCCATCCCAC TGGGTGGGGTGG GTGGAGCAC chr9:98389941-98390041 - 58 7.12e-06 CTGGCCTGGT GGGGTGGGGCTG AAGATAAGAA chr15:34829703-34829803 + 33 7.12e-06 AACTGGGGTT GGGGTGGGGCTG AAGATAAGAC chr2:28462970-28463070 + 2 7.12e-06 A TGGGCGGGGCCC ACCACACCCA chr11:117187370-11718747 + 46 7.12e-06 AGAGGGAGGA GGGGTGTGGCCT CAGAGAACCC chr11:61433606-61433706 - 5 7.12e-06 AGCTGCAGGC AGGGTGGGGTAG GGTG chr4:44084687-44084787 - 65 7.12e-06 CTCGATAGGA GGGGTGTGGCGG CGGGGAATGG chr9:31059930-31060030 + 18 7.12e-06 GATAACCAGA GGGGTGTGGTCC TCGGAGCAGA chr2:167454293-167454393 - 48 7.12e-06 TATACACGCA GGGGTGTGGCCT CATGCACACA chr7:139915431-139915531 + 48 7.12e-06 GAGCGCTGTC AGGGCGGGGCTG TTTTGTAACA chr4:111173961-111174061 - 72 8.29e-06 GCTCTGATAT AGGGTGGGGTCT TACAAGCATG chr5:77087235-77087335 + 71 8.29e-06 TTGGATGCAG TGGGTGGGGTAC TATGGCTTTN chr4:122963963-122964063 + 28 8.29e-06 ATGTTGTACC TGGGTGTGGTGT TCTCTTGGCT chr4:129140943-129141043 - 67 8.29e-06 AAGGTGGGGT AGGGTGGGGTGG GGAGCATGGT chr2:103962050-103962150 + 34 8.29e-06 TTCTCAGGGA TGGGTGTGGTGT TTGAGGTGGG chr5:115468248-115468348 - 22 8.29e-06 TGGAGGGAAG TGGGTGTGCCTG TCAGACTCAC chr19:6236068-6236168 + 42 8.29e-06 CCTGCTGGGA GGGGTGTGGTTC ACTAGAGGCT chr7:128850881-128850981 + 3 8.29e-06 TT AGGGCGTGGTTC TGCGTGTTGA chr7:128112655-128112755 + 44 9.24e-06 CCAGGGTGTC TGGGTGGGGTGC TGGTTACTGG chr7:148354572-148354672 + 44 9.24e-06 TGCCACGAAA TGGGTGTGACTG TGATGAGAGC chr3:60623494-60623594 + 32 9.24e-06 CTCAGACCAA TGGGTGTGCCCC TCTCCCACGT chr12:112796792-11279689 + 36 9.24e-06 CTAAAGGGCC TGGGTGTGACTG GGTACATCTG chr9:70682445-70682545 - 19 1.01e-05 GCACGCTGGC TGGGTGTGTCTG ACTTCCCTGT chr7:111007528-111007628 + 21 1.01e-05 TAGTGTCAGC TGGGTGGGGTCA CAGACTGTGG chr19:44460303-44460403 + 57 1.01e-05 AGATGCAGTT TGGGTGTGCCTC TAAAAGTCCC chr2:31940723-31940823 + 63 1.01e-05 AGTCACACTA AGGGTGTGCCCC ACCACGGCCC chr4:44016938-44017038 + 84 1.01e-05 AGATGCAGTT TGGGTGTGCCTC TACAG chr2:72858949-72859049 + 73 1.01e-05 AGATGCAGAT TGGGTGTGCCTC TAAAGGCCTT chr2:157978335-157978435 - 46 1.01e-05 TATATTATCT TGGGCGTGGCTA GTTTATCAAA chr13:114649129-11464922 + 47 1.01e-05 CTGTTGGGTT TGGGTGTGCCTC TCTGTAATGC chr1:183078713-183078813 - 47 1.01e-05 AGGTGCGGCT TGGGTGTGCCTC TAAAAGCTCC chr14:55043396-55043496 - 11 1.09e-05 GGAAGCAGTT AGGGTGTGCCTC TAAAAGTTTC chr7:20321984-20322084 + 52 1.09e-05 GCCCCATGGG TGGGTGTGTCCC TTGTGGTTCT chr17:29067181-29067281 - 10 1.09e-05 AATTGGGATA TGGGTGTGTCCC AGACGTGTC chr11:94858857-94858957 - 49 1.18e-05 AGGGGTGGCT GGGGTGTGGTAG GCTATTGTGC chr3:108248002-108248102 + 29 1.18e-05 AGAAGTGAAA AGGGCGTGGTAG CCTTATGCGG chr16:44265652-44265752 + 3 1.18e-05 TC TGGGCGGGGCAG CACTTACTGT chr9:75406567-75406667 + 54 1.18e-05 AATCACAAAA AGGGTGTGTCCC AAGTTTTGTG chr4:132847119-132847219 + 33 1.18e-05 AGATAGGGCA AGGGTGTGACTC AGTGGAAAGT chr10:126642275-12664237 - 58 1.18e-05 TAACAGAAAC TGGGTGTGTCTC TTCCCACTGG chr11:69759801-69759901 - 35 1.29e-05 ACCAGCTGTT GGGGTGTGGTGG GCGGGGTATA chr16:10384210-10384310 + 14 1.29e-05 GAGGAGAGGA GGGGTGGGGCAG GACTCTAGTT chr11:115373881-11537398 - 76 1.29e-05 CAGCGCTTAC AGGGCGGGGCAG AACTGGAGAT chr14:21299128-21299228 + 10 1.45e-05 CTGCAGCTT TGGGTGGAGCCG CGCAAGTGGG chr2:93306455-93306555 + 31 1.45e-05 TGGGACTGTA AGGGCGGGGCCT GGGTAGATAT chr3:79383668-79383768 - 49 1.45e-05 CACATTTATT TGGGTGTGGGCC TTCAGCACGC chr13:74873192-74873292 + 26 1.64e-05 TCCCACTCTC AGGGCGTGGTGC TCCCTACACT chr5:89197187-89197287 + 42 1.64e-05 TCTGATAGAT AGGGCGTGGTGC TCTTTAGAAG chr12:78031163-78031263 - 20 1.64e-05 GCATGATGGG TGGGCGTGGTCA GGGAGATAAA chr4:151334550-151334650 + 9 1.83e-05 CAGAAACC TGGGTGGAGCCC CATAGGCTAG chr11:53839886-53839986 - 59 1.83e-05 GTAGACAGCT AGGGTGTGGGTC CCACCTGCAG chr11:44322387-44322487 - 6 1.83e-05 GGCCGGCTGC TGGGTGGAGCCC AGCAG chr1:77295120-77295220 - 18 2.04e-05 CTGAACAGAC AGGGTGTGACCT ATCAGACGGG chr9:21362669-21362769 + 60 2.04e-05 CCAACTCAGG AGGGTGTGTCAG ACCTATCTTC chr14:56154881-56154981 - 40 2.04e-05 ACCAGGGGGC AGGGTGTGACCT GCAATGTCCT chr11:32168935-32169035 + 31 2.04e-05 GGCCAAGGGC TGGGTGGAGCTC ACAGACGCTA chr15:78243388-78243488 + 38 2.04e-05 ACAGTGACTT TGGGTGTGACTT CGCCTTAGGC chr11:115374472-11537457 - 32 2.04e-05 TGTCTGTGCT TGGGCGGGGCTA GGGAGCCATC chr19:55940202-55940302 + 60 2.22e-05 TGACAGTAAT AGGGTGTGACAC GGCATAACTG chr17:47735004-47735104 + 52 2.22e-05 TGGAGAGGAG TGGGTGGGGTGA AGGACACTTG chr1:82633922-82634022 - 27 2.22e-05 CCACACAGTT AGGGTGTGTCCT GCCTGTGTCT chr15:95715578-95715678 + 80 2.22e-05 GGTGGGACCC AGGGCGGGGCTA GTAACACTG chr5:118929925-118930025 + 29 2.38e-05 CTCTGTTCAC TGGGTGAGGCTG ACGGCCAGAC chr16:8686807-8686907 - 50 2.38e-05 GCTGTCACAG AGGGTGGGGTGA CCGTAATCAG chr9:108709855-108709955 + 75 2.38e-05 TTGACAAGTT GGGGCGTGGTCC AGAAGGGAGT chr11:68709693-68709793 - 49 2.38e-05 CAGTGTCTGT TGGGTGTGGACC TAGGTCTACA chr16:49839619-49839719 - 75 2.38e-05 AACCGAGGGC AGGGTGTGTTTC ATTCAAGTGT chr5:143681948-143682048 - 36 2.38e-05 TTGGCAAGGC TGGGTGTGACCA CCTTAGCAGC chr4:118293095-118293195 - 60 2.38e-05 CTCTAGCGTT TGGGCGTGCCCG GATTGCTTCG chr1:9738232-9738332 - 16 2.61e-05 GTGTGAGTGC GGGGTGGGGTGG TGGCCGTTAC chr11:117642058-11764215 + 69 2.61e-05 CGCTCCGCCC TGGGCGTGGTGT CTGTTTCTAA chr4:9588076-9588176 - 62 2.61e-05 GCACTGTTCA AGGGCGGGGTGG GGAGGGGCCA chr16:76323700-76323800 - 66 2.61e-05 CATCCCTACT TGGGTGTGTCCA GGGCACTTGC chr11:84636991-84637091 - 33 2.89e-05 GCAAGGCTGA TGGGTGGAGCAG ACCGAAGACA chr13:56459264-56459364 + 54 2.89e-05 CAGTCTTCTA AGGGCGTAGCTG ATGCTGAGAG chr8:24164438-24164538 - 26 2.89e-05 ACCATTGATA AGGGCGTGCCTG AGGTACTCCA chr2:25869094-25869194 + 40 2.89e-05 CGAGGAAAGC AGGGTGAGGCCC AGGATCTGTC chr9:114375900-114376000 - 36 2.89e-05 TGCTCAGCAC AGGGTGAGGCCC AGGAAGGGGT chr7:148956811-148956911 + 38 2.89e-05 TGTCTCCTCT TGGGTGCGGCTG CGTTGTGGTA chr5:73746596-73746696 + 72 2.89e-05 GTAGAGAGGC TGGGTGGAGCAG GTGCAAAGTA chr14:70865965-70866065 + 48 3.20e-05 ACTGGCAGCT GGGGTGGGGCGT TCCCCACTTG chr12:70860459-70860559 - 55 3.20e-05 GCAGTTACAA TGGGTGGAGTCC TAGGCGCCAA chr10:40924606-40924706 - 80 3.20e-05 GGGTGTGGC TGGGTGTGCTTT ATCATCTCGC chr9:70774506-70774606 - 28 3.20e-05 GGAAAGGGCA TGGGTGGAGTCC TGAACTCAAC chr11:32150816-32150916 + 21 3.20e-05 ACCCAGGCCA AGGGTGGAGCAG ACCACTGTGG chr1:75175758-75175858 - 26 3.55e-05 AGCATTGGAT GGGGTGTGTCTG TGCTGAGTCA chr5:65203205-65203305 + 42 3.55e-05 TCCGAAGTAC TGGGTGTGGGCA GAATCTTATC chr19:45865025-45865125 - 58 3.55e-05 GCTTGTTCAC TGGGCGTGGTGA ATGGTAGGAA chr11:121295411-12129551 - 84 3.55e-05 AGATA AGGGTGGAGTCC TAGCCATGGG chr13:57679176-57679276 - 23 3.87e-05 AGTTCTAAGA AGGGCGTGACTC TTGCAGATGC chr1:36976471-36976571 - 38 4.15e-05 AGCTCCTCTG AGGGTGGGACTT AACTCTCAGA chr6:135115626-135115726 - 37 4.15e-05 TGTGCTTAGT TGGGTGGGTCTT GAGAATGCTT chr4:118863134-118863234 - 50 4.15e-05 TCAGTTGGGG AGGGTGTGACGT GAGAGGAGGG chr13:73612723-73612823 + 47 4.15e-05 AGGCCACACC TGGGTGTGCTTA GGGTGTTTCT chr17:24289203-24289303 - 68 4.48e-05 GCCTGTGGTA TGGGTGTGGATT GGGGGACAGC chr6:34428672-34428772 + 45 4.48e-05 GATTGCTAGC AGGGTGTAGCAA GTACCTCGGC chr13:100518006-10051810 - 80 4.90e-05 GGGCGGAAC TGGGCGGAGCTG TTTCTGCAGA chr9:66763904-66764004 + 27 4.90e-05 GCTCTTTCCT GGGGCGTGGTGC TTATCAAATT chr4:117504522-117504622 + 24 5.40e-05 CAGCAAGCAA TGGGTGCGGTCC AGTACTGCCT chr2:164599349-164599449 + 77 5.40e-05 GCAAAGGAAA AGGGCGTAGTCC TTGAAGCAGC chr3:88305498-88305598 + 33 5.40e-05 NNNNNTGCAA TGGGAGTGGCCT GAGGCTCCCT chr4:41334757-41334857 + 8 5.40e-05 TTCTAGA AGGGCGTGCCGG TTTGTTTACC chr17:48438405-48438505 + 54 5.40e-05 GACAGAGGGA TGGGTGGAGTCT TGGGCCAAAT chr5:143814327-143814427 - 10 5.94e-05 ACTTTGGGCA TGGGTGGGTTAG AGAAACGGA chr14:55690869-55690969 + 43 5.94e-05 TGGGTCCCCC AGTGTGTGGCTG GGAGTTGCTT chr11:50038236-50038336 - 78 5.94e-05 GGATCTGGCA TGGGAGGGGCCC GCTGTAGCCG chr11:104842981-10484308 + 83 5.94e-05 NNNTGCTCTC AGGGTGTGGACA TTTAGT chr12:112505813-11250591 + 57 5.94e-05 AGAAACTGAC AGGGCGTGACCT CTGGAGTAGG chr16:32508973-32509073 - 78 5.94e-05 AGCCAAAGAC TGGGCGGGGTAA GTCTGAGAAG chr6:57653287-57653387 - 71 6.44e-05 AAAAATTAAG AGGGCGTGACTT TAGCGTTTCT chr2:152650539-152650639 - 31 7.34e-05 GCACAGGTCT TGGGCGTAGTAG TCACTGATGA chr5:28369133-28369233 - 65 7.34e-05 AGGGTGGAGA AGGGAGTGGCCA GGGCTCAGCT chrX:146984102-146984202 - 30 7.34e-05 GGATGAGCCC AGGGCGTGGGAG AGAAGAAGAA chr11:87539592-87539692 + 20 7.90e-05 ACTTGACAGT TGGTTGTGGCTG CTTCTCTCTT chr11:86476946-86477046 - 43 8.56e-05 TGTCTGAGTA AGAGTGTGGCTG TATGATAATC chr15:73181610-73181710 - 73 8.56e-05 GCTGAGATGT AGGGAGTGGTAG TCCTTGATAT chr17:47754578-47754678 - 34 8.56e-05 NNNNNNNNNN NGGGTGTGACCA ACTCCTAATG chr11:69793283-69793383 - 50 8.56e-05 TGGAGTGGGA AGGGCGTAGTCT CCTGAAGGCT chr7:135432387-135432487 - 60 9.34e-05 GAGCTGCAGG AGGGTGTCGCCC AGTTTCTGGG chr10:59336303-59336403 + 16 9.34e-05 CAGACCACTT AGGGCGGAGTCC ATTCGTCGTT chr7:28320389-28320489 - 10 1.02e-04 NNNNNNNNNN GGGGCGGGGCAA GGGATGGTT chr17:26651345-26651445 + 82 1.02e-04 GGACACACAG TAGGTGTGGCAC ATGGGTG chr11:105013712-10501381 - 73 1.09e-04 CTGGCCCGCT TGGGTGGTGTTG TAGTAATTTG chr6:83115544-83115644 + 55 1.15e-04 CTTGTCAGCT AGGGCGAGGCAG CAGGAATGAG chr8:83025148-83025248 + 23 1.15e-04 GGTAGGCAAG AGGGCGGGCCCA GTGGCAGACA chr1:92185724-92185824 - 40 1.23e-04 TCTAGTCAAG AGGGTGTAGACG CCCTTCTGAG chr4:128287320-128287420 + 43 1.42e-04 CTAGATTAGA AGGGCGTGGGGT CGGGGTCTAC chr1:135696217-135696317 + 5 1.42e-04 GAGA TGCGTGGGGCGG TGCCCTCAGA chr9:42909936-42910036 - 77 1.74e-04 NNNNNNNNTT TGGGCGTTGTTC TGTTTTGCAG chr10:128184602-12818470 + 60 1.85e-04 GCTAATCCGA AGTGTGGGGCGC GGCTAATTAG chr4:118862379-118862479 - 57 1.85e-04 GTGGGCAGAC AGGGCGTTGCTT GTTTGTTTAT chr15:56455062-56455162 + 46 1.96e-04 CAACTGTTGA GGGGCGGGGGCC GTAAATGCCA chr1:88057039-88057139 - 37 2.58e-04 TCCTGCGGAT AGGGCGTGTGCC GCCATCCTCC chr17:87913076-87913176 + 20 3.28e-04 AATTCTAAAC TGCGTGTGCTTG GCGTCTCTCC chr17:25716182-25716282 - 82 3.52e-04 AGGTGAG AAGGCGGGGTCC GGAAGCTCAC chr14:63729027-63729127 - 59 5.72e-04 GGGCCCTCCC AGGGTGCGNNNN NNNNNNNNNN chr11:51213799-51213899 - 16 9.03e-03 NNNNNNNNNN NNNNTGTGGCGG AGGATGATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:28960250-28960350 1.6e-07 24_[+1]_64 chr6:86027770-86027870 1.6e-07 26_[+1]_62 chr5:65255863-65255963 1.6e-07 5_[-1]_83 chr17:43466516-43466616 2.6e-07 23_[-1]_65 chr6:38866491-38866591 2.6e-07 72_[+1]_16 chr13:3866264-3866364 2.6e-07 68_[-1]_20 chr13:112833728-11283382 2.6e-07 35_[+1]_53 chr9:112905109-112905209 2.6e-07 84_[+1]_4 chr15:76083898-76083998 2.6e-07 50_[-1]_38 chr16:91352912-91353012 2.6e-07 60_[-1]_28 chr19:53259935-53260035 2.6e-07 11_[+1]_77 chr15:58828418-58828518 3.7e-07 73_[-1]_15 chr7:151917812-151917912 3.7e-07 22_[+1]_66 chr5:45951563-45951663 3.7e-07 66_[-1]_22 chr3:51492456-51492556 3.7e-07 27_[+1]_61 chr9:21940047-21940147 3.7e-07 8_[-1]_80 chr18:61379739-61379839 3.7e-07 57_[-1]_31 chr1:136638480-136638580 3.7e-07 11_[-1]_77 chr7:28233709-28233809 4.2e-07 40_[-1]_48 chr4:43977109-43977209 4.8e-07 31_[+1]_57 chr11:90524330-90524430 6.9e-07 25_[+1]_63 chr6:72324692-72324792 6.9e-07 83_[+1]_5 chr5:64826640-64826740 6.9e-07 83_[-1]_5 chr13:3862101-3862201 6.9e-07 19_[+1]_69 chr17:84179513-84179613 1.1e-06 43_[+1]_45 chr9:44096484-44096584 1.1e-06 60_[-1]_28 chr11:86427474-86427574 1.1e-06 26_[-1]_62 chr7:19832205-19832305 1.1e-06 34_[-1]_54 chr7:25993967-25994067 1.1e-06 46_[-1]_42 chr1:169314206-169314306 1.1e-06 17_[-1]_71 chr7:139969682-139969782 1.1e-06 23_[-1]_65 chr5:33616212-33616312 1.5e-06 52_[-1]_36 chr17:26079523-26079623 1.5e-06 87_[-1]_1 chr11:69186639-69186739 1.5e-06 66_[+1]_22 chr14:41760572-41760672 1.5e-06 65_[-1]_23 chr11:107308642-10730874 1.5e-06 80_[-1]_8 chr5:27985058-27985158 1.5e-06 76_[-1]_12 chr9:107206716-107206816 1.5e-06 22_[+1]_66 chr11:101309431-10130953 1.5e-06 71_[+1]_17 chr15:82060181-82060281 1.5e-06 10_[-1]_78 chr9:7790419-7790519 1.5e-06 73_[+1]_15 chr2:25742739-25742839 1.5e-06 36_[+1]_52 chr5:139858100-139858200 1.5e-06 37_[-1]_51 chr12:80012615-80012715 1.5e-06 16_[-1]_72 chr1:133343881-133343981 1.5e-06 38_[+1]_50 chr11:96817328-96817428 1.8e-06 78_[+1]_10 chr9:108243078-108243178 1.8e-06 29_[-1]_59 chr4:128532891-128532991 1.8e-06 64_[-1]_24 chr11:90547828-90547928 1.8e-06 71_[-1]_17 chr17:85277577-85277677 2e-06 83_[-1]_5 chr10:57527583-57527683 2e-06 32_[-1]_56 chr17:45884714-45884814 2.4e-06 46_[-1]_42 chr6:81915767-81915867 2.4e-06 [+1]_88 chr14:79702842-79702942 2.4e-06 52_[-1]_36 chr6:34857294-34857394 2.9e-06 16_[-1]_72 chr13:113537909-11353800 2.9e-06 62_[-1]_26 chr8:74937708-74937808 2.9e-06 65_[-1]_23 chr19:6300359-6300459 2.9e-06 1_[+1]_87 chr5:30289967-30290067 2.9e-06 52_[-1]_36 chr12:102194281-10219438 2.9e-06 20_[-1]_68 chr11:115367838-11536793 2.9e-06 79_[-1]_9 chr15:81700365-81700465 2.9e-06 33_[-1]_55 chr12:70394724-70394824 2.9e-06 53_[-1]_35 chr1:155596604-155596704 3.6e-06 13_[+1]_75 chr1:135693774-135693874 3.6e-06 3_[-1]_85 chr10:111261809-11126190 3.6e-06 45_[+1]_43 chr5:138127195-138127295 3.6e-06 41_[+1]_47 chr13:35887679-35887779 3.6e-06 45_[-1]_43 chr8:107823856-107823956 3.6e-06 30_[+1]_58 chr16:49776998-49777098 3.6e-06 87_[-1]_1 chr15:83139083-83139183 3.6e-06 21_[-1]_67 chr3:145253490-145253590 3.6e-06 60_[-1]_28 chr10:110604367-11060446 3.6e-06 35_[+1]_53 chr3:84162551-84162651 4.3e-06 65_[+1]_23 chr12:27135942-27136042 4.3e-06 80_[-1]_8 chr10:40726422-40726522 4.3e-06 56_[+1]_32 chr13:112863643-11286374 4.7e-06 73_[-1]_15 chr9:113850419-113850519 4.7e-06 35_[+1]_53 chr15:91082414-91082514 4.7e-06 44_[-1]_44 chr18:23868475-23868575 4.7e-06 65_[+1]_23 chr17:25039617-25039717 5e-06 41_[+1]_47 chr14:63796625-63796725 5e-06 48_[-1]_40 chr10:60612188-60612288 5.5e-06 18_[+1]_70 chr8:87362361-87362461 5.5e-06 55_[-1]_33 chr7:149571620-149571720 6.2e-06 36_[-1]_52 chr2:24832339-24832439 6.2e-06 43_[+1]_45 chr7:99891351-99891451 6.2e-06 19_[-1]_69 chr4:154285743-154285843 7.1e-06 28_[+1]_60 chr8:87494748-87494848 7.1e-06 79_[+1]_9 chr9:98389941-98390041 7.1e-06 57_[-1]_31 chr15:34829703-34829803 7.1e-06 32_[+1]_56 chr2:28462970-28463070 7.1e-06 1_[+1]_87 chr11:117187370-11718747 7.1e-06 45_[+1]_43 chr11:61433606-61433706 7.1e-06 4_[-1]_84 chr4:44084687-44084787 7.1e-06 64_[-1]_24 chr9:31059930-31060030 7.1e-06 17_[+1]_71 chr2:167454293-167454393 7.1e-06 47_[-1]_41 chr7:139915431-139915531 7.1e-06 47_[+1]_41 chr4:111173961-111174061 8.3e-06 71_[-1]_17 chr5:77087235-77087335 8.3e-06 70_[+1]_18 chr4:122963963-122964063 8.3e-06 27_[+1]_61 chr4:129140943-129141043 8.3e-06 66_[-1]_22 chr2:103962050-103962150 8.3e-06 33_[+1]_55 chr5:115468248-115468348 8.3e-06 21_[-1]_67 chr19:6236068-6236168 8.3e-06 41_[+1]_47 chr7:128850881-128850981 8.3e-06 2_[+1]_86 chr7:128112655-128112755 9.2e-06 43_[+1]_45 chr7:148354572-148354672 9.2e-06 43_[+1]_45 chr3:60623494-60623594 9.2e-06 31_[+1]_57 chr12:112796792-11279689 9.2e-06 35_[+1]_53 chr9:70682445-70682545 1e-05 18_[-1]_70 chr7:111007528-111007628 1e-05 20_[+1]_68 chr19:44460303-44460403 1e-05 56_[+1]_32 chr2:31940723-31940823 1e-05 62_[+1]_26 chr4:44016938-44017038 1e-05 83_[+1]_5 chr2:72858949-72859049 1e-05 72_[+1]_16 chr2:157978335-157978435 1e-05 45_[-1]_43 chr13:114649129-11464922 1e-05 46_[+1]_42 chr1:183078713-183078813 1e-05 46_[-1]_42 chr14:55043396-55043496 1.1e-05 10_[-1]_78 chr7:20321984-20322084 1.1e-05 51_[+1]_37 chr17:29067181-29067281 1.1e-05 9_[-1]_79 chr11:94858857-94858957 1.2e-05 48_[-1]_40 chr3:108248002-108248102 1.2e-05 28_[+1]_60 chr16:44265652-44265752 1.2e-05 2_[+1]_86 chr9:75406567-75406667 1.2e-05 53_[+1]_35 chr4:132847119-132847219 1.2e-05 32_[+1]_56 chr10:126642275-12664237 1.2e-05 57_[-1]_31 chr11:69759801-69759901 1.3e-05 34_[-1]_54 chr16:10384210-10384310 1.3e-05 13_[+1]_75 chr11:115373881-11537398 1.3e-05 75_[-1]_13 chr14:21299128-21299228 1.4e-05 9_[+1]_79 chr2:93306455-93306555 1.4e-05 30_[+1]_58 chr3:79383668-79383768 1.4e-05 48_[-1]_40 chr13:74873192-74873292 1.6e-05 25_[+1]_63 chr5:89197187-89197287 1.6e-05 41_[+1]_47 chr12:78031163-78031263 1.6e-05 19_[-1]_69 chr4:151334550-151334650 1.8e-05 8_[+1]_80 chr11:53839886-53839986 1.8e-05 58_[-1]_30 chr11:44322387-44322487 1.8e-05 5_[-1]_83 chr1:77295120-77295220 2e-05 17_[-1]_71 chr9:21362669-21362769 2e-05 59_[+1]_29 chr14:56154881-56154981 2e-05 39_[-1]_49 chr11:32168935-32169035 2e-05 30_[+1]_58 chr15:78243388-78243488 2e-05 37_[+1]_51 chr11:115374472-11537457 2e-05 31_[-1]_57 chr19:55940202-55940302 2.2e-05 59_[+1]_29 chr17:47735004-47735104 2.2e-05 51_[+1]_37 chr1:82633922-82634022 2.2e-05 26_[-1]_62 chr15:95715578-95715678 2.2e-05 79_[+1]_9 chr5:118929925-118930025 2.4e-05 28_[+1]_60 chr16:8686807-8686907 2.4e-05 49_[-1]_39 chr9:108709855-108709955 2.4e-05 74_[+1]_14 chr11:68709693-68709793 2.4e-05 48_[-1]_40 chr16:49839619-49839719 2.4e-05 74_[-1]_14 chr5:143681948-143682048 2.4e-05 35_[-1]_53 chr4:118293095-118293195 2.4e-05 59_[-1]_29 chr1:9738232-9738332 2.6e-05 15_[-1]_73 chr11:117642058-11764215 2.6e-05 68_[+1]_20 chr4:9588076-9588176 2.6e-05 61_[-1]_27 chr16:76323700-76323800 2.6e-05 65_[-1]_23 chr11:84636991-84637091 2.9e-05 32_[-1]_56 chr13:56459264-56459364 2.9e-05 53_[+1]_35 chr8:24164438-24164538 2.9e-05 25_[-1]_63 chr2:25869094-25869194 2.9e-05 39_[+1]_49 chr9:114375900-114376000 2.9e-05 35_[-1]_53 chr7:148956811-148956911 2.9e-05 37_[+1]_51 chr5:73746596-73746696 2.9e-05 71_[+1]_17 chr14:70865965-70866065 3.2e-05 47_[+1]_41 chr12:70860459-70860559 3.2e-05 54_[-1]_34 chr10:40924606-40924706 3.2e-05 79_[-1]_9 chr9:70774506-70774606 3.2e-05 27_[-1]_61 chr11:32150816-32150916 3.2e-05 20_[+1]_68 chr1:75175758-75175858 3.5e-05 25_[-1]_63 chr5:65203205-65203305 3.5e-05 41_[+1]_47 chr19:45865025-45865125 3.5e-05 57_[-1]_31 chr11:121295411-12129551 3.5e-05 83_[-1]_5 chr13:57679176-57679276 3.9e-05 22_[-1]_66 chr1:36976471-36976571 4.2e-05 37_[-1]_51 chr6:135115626-135115726 4.2e-05 36_[-1]_52 chr4:118863134-118863234 4.2e-05 49_[-1]_39 chr13:73612723-73612823 4.2e-05 46_[+1]_42 chr17:24289203-24289303 4.5e-05 67_[-1]_21 chr6:34428672-34428772 4.5e-05 44_[+1]_44 chr13:100518006-10051810 4.9e-05 79_[-1]_9 chr9:66763904-66764004 4.9e-05 26_[+1]_62 chr4:117504522-117504622 5.4e-05 23_[+1]_65 chr2:164599349-164599449 5.4e-05 76_[+1]_12 chr3:88305498-88305598 5.4e-05 32_[+1]_56 chr4:41334757-41334857 5.4e-05 7_[+1]_81 chr17:48438405-48438505 5.4e-05 53_[+1]_35 chr5:143814327-143814427 5.9e-05 9_[-1]_79 chr14:55690869-55690969 5.9e-05 42_[+1]_46 chr11:50038236-50038336 5.9e-05 77_[-1]_11 chr11:104842981-10484308 5.9e-05 82_[+1]_6 chr12:112505813-11250591 5.9e-05 56_[+1]_32 chr16:32508973-32509073 5.9e-05 77_[-1]_11 chr6:57653287-57653387 6.4e-05 70_[-1]_18 chr2:152650539-152650639 7.3e-05 30_[-1]_58 chr5:28369133-28369233 7.3e-05 64_[-1]_24 chrX:146984102-146984202 7.3e-05 29_[-1]_59 chr11:87539592-87539692 7.9e-05 19_[+1]_69 chr11:86476946-86477046 8.6e-05 42_[-1]_46 chr15:73181610-73181710 8.6e-05 72_[-1]_16 chr17:47754578-47754678 8.6e-05 33_[-1]_55 chr11:69793283-69793383 8.6e-05 49_[-1]_39 chr7:135432387-135432487 9.3e-05 59_[-1]_29 chr10:59336303-59336403 9.3e-05 15_[+1]_73 chr7:28320389-28320489 0.0001 9_[-1]_79 chr17:26651345-26651445 0.0001 81_[+1]_7 chr11:105013712-10501381 0.00011 72_[-1]_16 chr6:83115544-83115644 0.00012 54_[+1]_34 chr8:83025148-83025248 0.00012 22_[+1]_66 chr1:92185724-92185824 0.00012 39_[-1]_49 chr4:128287320-128287420 0.00014 42_[+1]_46 chr1:135696217-135696317 0.00014 4_[+1]_84 chr9:42909936-42910036 0.00017 76_[-1]_12 chr10:128184602-12818470 0.00018 59_[+1]_29 chr4:118862379-118862479 0.00018 56_[-1]_32 chr15:56455062-56455162 0.0002 45_[+1]_43 chr1:88057039-88057139 0.00026 36_[-1]_52 chr17:87913076-87913176 0.00033 19_[+1]_69 chr17:25716182-25716282 0.00035 81_[-1]_7 chr14:63729027-63729127 0.00057 58_[-1]_30 chr11:51213799-51213899 0.009 15_[-1]_73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGGGTGTGGYYS width=12 seqs=225 chr17:28960250-28960350 ( 25) TGGGTGTGGCTG 1 chr6:86027770-86027870 ( 27) AGGGTGTGGCCG 1 chr5:65255863-65255963 ( 6) TGGGTGTGGCTG 1 chr17:43466516-43466616 ( 24) TGGGTGTGGCCC 1 chr6:38866491-38866591 ( 73) AGGGTGTGGCTG 1 chr13:3866264-3866364 ( 69) AGGGTGTGGCTG 1 chr13:112833728-11283382 ( 36) AGGGTGTGGCTG 1 chr9:112905109-112905209 ( 85) TGGGTGTGGCCC 1 chr15:76083898-76083998 ( 51) AGGGTGTGGCTG 1 chr16:91352912-91353012 ( 61) AGGGTGTGGCTG 1 chr19:53259935-53260035 ( 12) TGGGTGTGGCCC 1 chr15:58828418-58828518 ( 74) AGGGTGTGGCCC 1 chr7:151917812-151917912 ( 23) TGGGTGTGGCTC 1 chr5:45951563-45951663 ( 67) TGGGTGTGGCTC 1 chr3:51492456-51492556 ( 28) TGGGTGTGGCTC 1 chr9:21940047-21940147 ( 9) TGGGTGTGGCTC 1 chr18:61379739-61379839 ( 58) TGGGTGTGGCTC 1 chr1:136638480-136638580 ( 12) AGGGTGTGGCCC 1 chr7:28233709-28233809 ( 41) AGGGTGTGGCTC 1 chr4:43977109-43977209 ( 32) TGGGTGTGGTCG 1 chr11:90524330-90524430 ( 26) TGGGTGTGGCAG 1 chr6:72324692-72324792 ( 84) AGGGTGTGGTCG 1 chr5:64826640-64826740 ( 84) TGGGTGTGGCAG 1 chr13:3862101-3862201 ( 20) TGGGTGTGGTTG 1 chr17:84179513-84179613 ( 44) TGGGTGTGGCCT 1 chr9:44096484-44096584 ( 61) TGGGTGGGGCTG 1 chr11:86427474-86427574 ( 27) TGGGTGGGGCTG 1 chr7:19832205-19832305 ( 35) TGGGTGTGGCCT 1 chr7:25993967-25994067 ( 47) AGGGTGTGGTTG 1 chr1:169314206-169314306 ( 18) AGGGTGTGGCAG 1 chr7:139969682-139969782 ( 24) TGGGTGTGGCCT 1 chr5:33616212-33616312 ( 53) AGGGTGTGGCGG 1 chr17:26079523-26079623 ( 88) AGGGTGTGGTCC 1 chr11:69186639-69186739 ( 67) TGGGTGTGGTTC 1 chr14:41760572-41760672 ( 66) TGGGTGTGGCAC 1 chr11:107308642-10730874 ( 81) AGGGTGTGGTCC 1 chr5:27985058-27985158 ( 77) AGGGTGTGGCCT 1 chr9:107206716-107206816 ( 23) TGGGTGTGGTTC 1 chr11:101309431-10130953 ( 72) AGGGTGGGGCTG 1 chr15:82060181-82060281 ( 11) AGGGTGGGGCTG 1 chr9:7790419-7790519 ( 74) TGGGTGTGGCAC 1 chr2:25742739-25742839 ( 37) TGGGTGTGGCAC 1 chr5:139858100-139858200 ( 38) TGGGTGTGGCTT 1 chr12:80012615-80012715 ( 17) AGGGTGGGGCTG 1 chr1:133343881-133343981 ( 39) AGGGTGTGGCCT 1 chr11:96817328-96817428 ( 79) AGGGTGTGGTTC 1 chr9:108243078-108243178 ( 30) AGGGTGGGGCCC 1 chr4:128532891-128532991 ( 65) AGGGTGTGGCTT 1 chr11:90547828-90547928 ( 72) AGGGTGTGGCAC 1 chr17:85277577-85277677 ( 84) TGGGTGTGGCCA 1 chr10:57527583-57527683 ( 33) TGGGTGTGGCCA 1 chr17:45884714-45884814 ( 47) TGGGTGTGGTAG 1 chr6:81915767-81915867 ( 1) GGGGTGTGGCCG 1 chr14:79702842-79702942 ( 53) AGGGTGTGGCTA 1 chr6:34857294-34857394 ( 17) TGGGTGTGGTGG 1 chr13:113537909-11353800 ( 63) TGGGTGGGGCAG 1 chr8:74937708-74937808 ( 66) AGGGCGTGGCTG 1 chr19:6300359-6300459 ( 2) TGGGTGGGGTTG 1 chr5:30289967-30290067 ( 53) TGGGTGTGGTGG 1 chr12:102194281-10219438 ( 21) TGGGTGGGGTTG 1 chr11:115367838-11536793 ( 80) TGGGTGTGGTGG 1 chr15:81700365-81700465 ( 34) TGGGTGTGGTCT 1 chr12:70394724-70394824 ( 54) TGGGTGGGGCAG 1 chr1:155596604-155596704 ( 14) TGGGTGGGGCGG 1 chr1:135693774-135693874 ( 4) AGGGTGGGGCAG 1 chr10:111261809-11126190 ( 46) AGGGTGTGGTCT 1 chr5:138127195-138127295 ( 42) AGGGTGTGGTCT 1 chr13:35887679-35887779 ( 46) AGGGTGGGGCAG 1 chr8:107823856-107823956 ( 31) AGGGTGGGGCAG 1 chr16:49776998-49777098 ( 88) AGGGTGTGGTGG 1 chr15:83139083-83139183 ( 22) AGGGTGTGGTGG 1 chr3:145253490-145253590 ( 61) AGGGTGTGGTGG 1 chr10:110604367-11060446 ( 36) TGGGTGTGGCAT 1 chr3:84162551-84162651 ( 66) GGGGTGTGGCTC 1 chr12:27135942-27136042 ( 81) AGGGTGGGGCCT 1 chr10:40726422-40726522 ( 57) TGGGTGGGGCAC 1 chr13:112863643-11286374 ( 74) TGGGTGTGGTCA 1 chr9:113850419-113850519 ( 36) TGGGTGTGGTCA 1 chr15:91082414-91082514 ( 45) AGGGTGTGGTGC 1 chr18:23868475-23868575 ( 66) AGGGTGTGGTGC 1 chr17:25039617-25039717 ( 42) AGGGTGTGGTCA 1 chr14:63796625-63796725 ( 49) AGGGTGTGGTCA 1 chr10:60612188-60612288 ( 19) AGGGTGTGGTTA 1 chr8:87362361-87362461 ( 56) AGGGTGGGGCCA 1 chr7:149571620-149571720 ( 37) GGGGTGTGGTTG 1 chr2:24832339-24832439 ( 44) AGGGCGTGGTTG 1 chr7:99891351-99891451 ( 20) GGGGTGTGGTTG 1 chr4:154285743-154285843 ( 29) GGGGTGGGGCTG 1 chr8:87494748-87494848 ( 80) TGGGTGGGGTGG 1 chr9:98389941-98390041 ( 58) GGGGTGGGGCTG 1 chr15:34829703-34829803 ( 33) GGGGTGGGGCTG 1 chr2:28462970-28463070 ( 2) TGGGCGGGGCCC 1 chr11:117187370-11718747 ( 46) GGGGTGTGGCCT 1 chr11:61433606-61433706 ( 5) AGGGTGGGGTAG 1 chr4:44084687-44084787 ( 65) GGGGTGTGGCGG 1 chr9:31059930-31060030 ( 18) GGGGTGTGGTCC 1 chr2:167454293-167454393 ( 48) GGGGTGTGGCCT 1 chr7:139915431-139915531 ( 48) AGGGCGGGGCTG 1 chr4:111173961-111174061 ( 72) AGGGTGGGGTCT 1 chr5:77087235-77087335 ( 71) TGGGTGGGGTAC 1 chr4:122963963-122964063 ( 28) TGGGTGTGGTGT 1 chr4:129140943-129141043 ( 67) AGGGTGGGGTGG 1 chr2:103962050-103962150 ( 34) TGGGTGTGGTGT 1 chr5:115468248-115468348 ( 22) TGGGTGTGCCTG 1 chr19:6236068-6236168 ( 42) GGGGTGTGGTTC 1 chr7:128850881-128850981 ( 3) AGGGCGTGGTTC 1 chr7:128112655-128112755 ( 44) TGGGTGGGGTGC 1 chr7:148354572-148354672 ( 44) TGGGTGTGACTG 1 chr3:60623494-60623594 ( 32) TGGGTGTGCCCC 1 chr12:112796792-11279689 ( 36) TGGGTGTGACTG 1 chr9:70682445-70682545 ( 19) TGGGTGTGTCTG 1 chr7:111007528-111007628 ( 21) TGGGTGGGGTCA 1 chr19:44460303-44460403 ( 57) TGGGTGTGCCTC 1 chr2:31940723-31940823 ( 63) AGGGTGTGCCCC 1 chr4:44016938-44017038 ( 84) TGGGTGTGCCTC 1 chr2:72858949-72859049 ( 73) TGGGTGTGCCTC 1 chr2:157978335-157978435 ( 46) TGGGCGTGGCTA 1 chr13:114649129-11464922 ( 47) TGGGTGTGCCTC 1 chr1:183078713-183078813 ( 47) TGGGTGTGCCTC 1 chr14:55043396-55043496 ( 11) AGGGTGTGCCTC 1 chr7:20321984-20322084 ( 52) TGGGTGTGTCCC 1 chr17:29067181-29067281 ( 10) TGGGTGTGTCCC 1 chr11:94858857-94858957 ( 49) GGGGTGTGGTAG 1 chr3:108248002-108248102 ( 29) AGGGCGTGGTAG 1 chr16:44265652-44265752 ( 3) TGGGCGGGGCAG 1 chr9:75406567-75406667 ( 54) AGGGTGTGTCCC 1 chr4:132847119-132847219 ( 33) AGGGTGTGACTC 1 chr10:126642275-12664237 ( 58) TGGGTGTGTCTC 1 chr11:69759801-69759901 ( 35) GGGGTGTGGTGG 1 chr16:10384210-10384310 ( 14) GGGGTGGGGCAG 1 chr11:115373881-11537398 ( 76) AGGGCGGGGCAG 1 chr14:21299128-21299228 ( 10) TGGGTGGAGCCG 1 chr2:93306455-93306555 ( 31) AGGGCGGGGCCT 1 chr3:79383668-79383768 ( 49) TGGGTGTGGGCC 1 chr13:74873192-74873292 ( 26) AGGGCGTGGTGC 1 chr5:89197187-89197287 ( 42) AGGGCGTGGTGC 1 chr12:78031163-78031263 ( 20) TGGGCGTGGTCA 1 chr4:151334550-151334650 ( 9) TGGGTGGAGCCC 1 chr11:53839886-53839986 ( 59) AGGGTGTGGGTC 1 chr11:44322387-44322487 ( 6) TGGGTGGAGCCC 1 chr1:77295120-77295220 ( 18) AGGGTGTGACCT 1 chr9:21362669-21362769 ( 60) AGGGTGTGTCAG 1 chr14:56154881-56154981 ( 40) AGGGTGTGACCT 1 chr11:32168935-32169035 ( 31) TGGGTGGAGCTC 1 chr15:78243388-78243488 ( 38) TGGGTGTGACTT 1 chr11:115374472-11537457 ( 32) TGGGCGGGGCTA 1 chr19:55940202-55940302 ( 60) AGGGTGTGACAC 1 chr17:47735004-47735104 ( 52) TGGGTGGGGTGA 1 chr1:82633922-82634022 ( 27) AGGGTGTGTCCT 1 chr15:95715578-95715678 ( 80) AGGGCGGGGCTA 1 chr5:118929925-118930025 ( 29) TGGGTGAGGCTG 1 chr16:8686807-8686907 ( 50) AGGGTGGGGTGA 1 chr9:108709855-108709955 ( 75) GGGGCGTGGTCC 1 chr11:68709693-68709793 ( 49) TGGGTGTGGACC 1 chr16:49839619-49839719 ( 75) AGGGTGTGTTTC 1 chr5:143681948-143682048 ( 36) TGGGTGTGACCA 1 chr4:118293095-118293195 ( 60) TGGGCGTGCCCG 1 chr1:9738232-9738332 ( 16) GGGGTGGGGTGG 1 chr11:117642058-11764215 ( 69) TGGGCGTGGTGT 1 chr4:9588076-9588176 ( 62) AGGGCGGGGTGG 1 chr16:76323700-76323800 ( 66) TGGGTGTGTCCA 1 chr11:84636991-84637091 ( 33) TGGGTGGAGCAG 1 chr13:56459264-56459364 ( 54) AGGGCGTAGCTG 1 chr8:24164438-24164538 ( 26) AGGGCGTGCCTG 1 chr2:25869094-25869194 ( 40) AGGGTGAGGCCC 1 chr9:114375900-114376000 ( 36) AGGGTGAGGCCC 1 chr7:148956811-148956911 ( 38) TGGGTGCGGCTG 1 chr5:73746596-73746696 ( 72) TGGGTGGAGCAG 1 chr14:70865965-70866065 ( 48) GGGGTGGGGCGT 1 chr12:70860459-70860559 ( 55) TGGGTGGAGTCC 1 chr10:40924606-40924706 ( 80) TGGGTGTGCTTT 1 chr9:70774506-70774606 ( 28) TGGGTGGAGTCC 1 chr11:32150816-32150916 ( 21) AGGGTGGAGCAG 1 chr1:75175758-75175858 ( 26) GGGGTGTGTCTG 1 chr5:65203205-65203305 ( 42) TGGGTGTGGGCA 1 chr19:45865025-45865125 ( 58) TGGGCGTGGTGA 1 chr11:121295411-12129551 ( 84) AGGGTGGAGTCC 1 chr13:57679176-57679276 ( 23) AGGGCGTGACTC 1 chr1:36976471-36976571 ( 38) AGGGTGGGACTT 1 chr6:135115626-135115726 ( 37) TGGGTGGGTCTT 1 chr4:118863134-118863234 ( 50) AGGGTGTGACGT 1 chr13:73612723-73612823 ( 47) TGGGTGTGCTTA 1 chr17:24289203-24289303 ( 68) TGGGTGTGGATT 1 chr6:34428672-34428772 ( 45) AGGGTGTAGCAA 1 chr13:100518006-10051810 ( 80) TGGGCGGAGCTG 1 chr9:66763904-66764004 ( 27) GGGGCGTGGTGC 1 chr4:117504522-117504622 ( 24) TGGGTGCGGTCC 1 chr2:164599349-164599449 ( 77) AGGGCGTAGTCC 1 chr3:88305498-88305598 ( 33) TGGGAGTGGCCT 1 chr4:41334757-41334857 ( 8) AGGGCGTGCCGG 1 chr17:48438405-48438505 ( 54) TGGGTGGAGTCT 1 chr5:143814327-143814427 ( 10) TGGGTGGGTTAG 1 chr14:55690869-55690969 ( 43) AGTGTGTGGCTG 1 chr11:50038236-50038336 ( 78) TGGGAGGGGCCC 1 chr11:104842981-10484308 ( 83) AGGGTGTGGACA 1 chr12:112505813-11250591 ( 57) AGGGCGTGACCT 1 chr16:32508973-32509073 ( 78) TGGGCGGGGTAA 1 chr6:57653287-57653387 ( 71) AGGGCGTGACTT 1 chr2:152650539-152650639 ( 31) TGGGCGTAGTAG 1 chr5:28369133-28369233 ( 65) AGGGAGTGGCCA 1 chrX:146984102-146984202 ( 30) AGGGCGTGGGAG 1 chr11:87539592-87539692 ( 20) TGGTTGTGGCTG 1 chr11:86476946-86477046 ( 43) AGAGTGTGGCTG 1 chr15:73181610-73181710 ( 73) AGGGAGTGGTAG 1 chr17:47754578-47754678 ( 34) NGGGTGTGACCA 1 chr11:69793283-69793383 ( 50) AGGGCGTAGTCT 1 chr7:135432387-135432487 ( 60) AGGGTGTCGCCC 1 chr10:59336303-59336403 ( 16) AGGGCGGAGTCC 1 chr7:28320389-28320489 ( 10) GGGGCGGGGCAA 1 chr17:26651345-26651445 ( 82) TAGGTGTGGCAC 1 chr11:105013712-10501381 ( 73) TGGGTGGTGTTG 1 chr6:83115544-83115644 ( 55) AGGGCGAGGCAG 1 chr8:83025148-83025248 ( 23) AGGGCGGGCCCA 1 chr1:92185724-92185824 ( 40) AGGGTGTAGACG 1 chr4:128287320-128287420 ( 43) AGGGCGTGGGGT 1 chr1:135696217-135696317 ( 5) TGCGTGGGGCGG 1 chr9:42909936-42910036 ( 77) TGGGCGTTGTTC 1 chr10:128184602-12818470 ( 60) AGTGTGGGGCGC 1 chr4:118862379-118862479 ( 57) AGGGCGTTGCTT 1 chr15:56455062-56455162 ( 46) GGGGCGGGGGCC 1 chr1:88057039-88057139 ( 37) AGGGCGTGTGCC 1 chr17:87913076-87913176 ( 20) TGCGTGTGCTTG 1 chr17:25716182-25716282 ( 82) AAGGCGGGGTCC 1 chr14:63729027-63729127 ( 59) AGGGTGCGNNNN 1 chr11:51213799-51213899 ( 16) NNNNTGTGGCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 9.56105 E= 3.4e-225 77 -681 -129 85 -467 -780 202 -780 -552 -461 200 -467 -780 -780 202 -552 -385 -35 -1446 163 -1446 -1446 203 -1446 -385 -419 24 141 -160 -578 188 -426 -201 -176 172 -212 -376 132 -292 40 -67 47 -72 46 -103 42 67 -67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 225 E= 3.4e-225 0.437831 0.002169 0.099947 0.460053 0.010027 0.001084 0.987751 0.001138 0.005582 0.009973 0.974418 0.010027 0.001138 0.001084 0.992196 0.005582 0.017778 0.191111 0.000000 0.791111 0.000000 0.000000 1.000000 0.000000 0.017778 0.013333 0.288889 0.680000 0.084444 0.004444 0.897778 0.013333 0.063360 0.072196 0.805529 0.058916 0.018916 0.609973 0.032196 0.338916 0.161138 0.338862 0.147751 0.352249 0.125582 0.325529 0.387751 0.161138 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGGGTGTGGYYS MEME-1 regular expression -------------------------------------------------------------------------------- [TA]GGGTG[TG]GG[CT][TC][GC] -------------------------------------------------------------------------------- Time 80.14 secs. ******************************************************************************** ******************************************************************************** MOTIF VWGATAAR MEME-2 width = 8 sites = 176 llr = 1388 E-value = 7.4e-025 ******************************************************************************** -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 Description -------------------------------------------------------------------------------- Simplified A 26:a:aa3 pos.-specific C 4::::::2 probability G 3:a::::5 matrix T 14::a::: bits 2.0 ***** 1.8 ***** 1.6 ***** 1.4 ***** Relative 1.2 ***** Entropy 1.0 ***** (11.4 bits) 0.8 ****** 0.6 ****** 0.4 ******* 0.2 ******** 0.0 -------- Multilevel CAGATAAG consensus GT A sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------- chr11:94858857-94858957 - 28 1.60e-05 ATTGTGCATA CAGATAAG GGTGTGTGGC chr2:37405045-37405145 + 49 1.60e-05 TAGTATTTCA CAGATAAG TAAGTTATCA chr1:77295120-77295220 - 41 1.60e-05 TGTTCCTCAA CAGATAAG GCTGAACAGA chr19:55940202-55940302 + 86 1.60e-05 TAACTGCCTG CAGATAAG AGGGGCT chr7:111007528-111007628 + 46 1.60e-05 ACTGTGGTGA CAGATAAG AGCCAGAGCT chr5:65203205-65203305 - 58 1.60e-05 GACATAGCTT CAGATAAG ATTCTGCCCA chr9:75406567-75406667 + 6 1.60e-05 CAGAG CAGATAAG CAAAATGGCC chr9:114375900-114376000 + 16 1.60e-05 TCCATGAACA CAGATAAG TCACCCCTTC chr7:104332486-104332586 - 15 1.60e-05 GGAGTGGCAG CAGATAAG CCAAAGACAA chr19:24354045-24354145 - 12 1.60e-05 NNNNNNNNTT CAGATAAG TCTCGGTTCT chr3:60623494-60623594 + 59 1.60e-05 CACGTGCTGG CAGATAAG AGCTGTTTTT chr11:90524330-90524430 + 57 3.19e-05 TAGAGGCAAC GAGATAAG ACTTTGCACC chr9:44096484-44096584 - 32 3.19e-05 TGAACTGCAA GAGATAAG CAATGAGGGG chr17:24339800-24339900 - 90 3.19e-05 CAT GAGATAAG CAGCTGCCAG chr13:76003197-76003297 - 50 3.19e-05 CTGCTAAGGA GAGATAAG ATGAGTCAAC chr16:10384210-10384310 + 52 3.19e-05 CCTGGAACCA GAGATAAG AAGCTTGGCC chr5:105994745-105994845 + 80 3.19e-05 TCTGTTGAGG GAGATAAG TCTTCAGGAT chr14:61272711-61272811 + 49 3.19e-05 CTGTCTCCTG GAGATAAG TCCAAGCCTC chr10:60612188-60612288 - 42 3.19e-05 ACACTAGGTG GAGATAAG AATGCCATTG chr10:127624308-12762440 - 92 3.19e-05 A GAGATAAG AGTNNNNNNN chr2:103324306-103324406 - 1 3.19e-05 ATATTCCTGT GAGATAAG chr9:121335571-121335671 - 12 3.19e-05 GTGACACTGT GAGATAAG GACTTAGTAG chr19:53259935-53260035 - 39 3.19e-05 GTGGTGGCAG GAGATAAG AAGATCGAAT chr8:83025148-83025248 + 91 3.19e-05 GTTGGGTGAT GAGATAAG GG chr4:9588076-9588176 - 19 3.19e-05 TTTCACAAAG GAGATAAG GACGTATTCT chr4:8631653-8631753 + 77 3.19e-05 TAGGGAAGAA GAGATAAG TTATTGTGGC chr4:111173961-111174061 - 49 4.79e-05 GCATGCTCCT CTGATAAG CATGGTGTCT chr14:69922786-69922886 + 78 4.79e-05 CAGGTGCATC CTGATAAG CAGGGAGGGA chr5:27985058-27985158 - 36 4.79e-05 CCTGTGACCT CTGATAAG AAATGTCTGA chr5:38900628-38900728 - 87 4.79e-05 TGTGGA CTGATAAG TGTATGAGAT chr7:56247540-56247640 - 26 4.79e-05 TGCTAGGGAA CTGATAAG GTGCCTCACA chr15:91082414-91082514 - 86 4.79e-05 ATAAAGC CTGATAAG AGACTATGGC chr7:19832205-19832305 - 18 4.79e-05 TGGGGCTTTT CTGATAAG AGGGCAGAAC chr11:96809235-96809335 - 25 4.79e-05 AGGGAGGACA CTGATAAG GTCTGGCCTT chr18:61379739-61379839 - 36 4.79e-05 TCACCCTGGT CTGATAAG GGCCAAGAGG chr11:115367838-11536793 + 56 4.79e-05 CACTGAAGCA CTGATAAG GCAGGCACGT chr17:87913076-87913176 + 69 4.79e-05 TCATCAAAGC CTGATAAG GAAAGCCGTC chr12:41846174-41846274 + 86 4.79e-05 GTGCCTGTGG CTGATAAG AAAGAGA chr5:140280103-140280203 - 32 4.79e-05 GCCCTCTGGG CTGATAAG ATAGGCTCTA chr13:96735031-96735131 + 57 4.79e-05 ATGTGTGTCG CTGATAAG AAAAAGGAAA chr4:46419777-46419877 + 75 6.39e-05 TGTCTCTGAT GTGATAAG TGCCAAGAGC chr16:8686807-8686907 - 72 6.39e-05 GTCCACTCCA GTGATAAG GCTGTCACAG chr11:68709693-68709793 + 78 6.39e-05 CTGTTGATAA GTGATAAG CAGACTACAA chr5:144579742-144579842 + 71 6.39e-05 CTGTGACGCC GTGATAAG AGTGTCTGCA chr7:106742879-106742979 + 11 6.39e-05 AGGGCTGGCT GTGATAAG AGTCATCTTC chr5:97380646-97380746 + 24 6.39e-05 GCGGGAGGGG GTGATAAG GCACACACTT chr13:94151184-94151284 - 38 6.39e-05 TGCAGGGATG GTGATAAG AAATGGGTAG chr14:71023664-71023764 + 57 6.39e-05 CAGGATATGG GTGATAAG ACTTGCCCAC chr7:139930393-139930493 - 73 6.39e-05 TCTGTGTGGT GTGATAAG GTATCTTTGT chr3:104477493-104477593 - 69 6.39e-05 CTGCACAAGT GTGATAAG AGGTCAATAT chr8:3522194-3522294 - 93 6.39e-05 . GTGATAAG CAATAAGAAC chr7:134369100-134369200 - 24 6.39e-05 TCTGCTCTGT GTGATAAG AAATGAAGGG chrX:146984102-146984202 + 75 6.39e-05 GACTCTAATG GTGATAAG CTCTAGGGGC chr3:100351338-100351438 - 45 6.39e-05 GCCTGAGGCA GTGATAAG GACCCGTGGT chr7:87847379-87847479 + 78 8.06e-05 CTGTTACCAG AAGATAAG CTCTGGTGTG chr6:38874024-38874124 + 87 8.06e-05 GGACATATTT AAGATAAG CCACTG chr11:97307228-97307328 - 75 8.06e-05 CAGGCGGACA AAGATAAG CAGCCTGACA chr8:126512498-126512598 - 46 8.06e-05 CTAAGGGAGA AAGATAAG AAAAGCTGGC chr5:28369133-28369233 - 31 8.06e-05 GGTACAGAGC AAGATAAG GCTTTAGTTG chr9:98389941-98390041 - 50 8.06e-05 GGTGGGGCTG AAGATAAG AAGGGCTATT chr15:34829703-34829803 + 45 8.06e-05 GGTGGGGCTG AAGATAAG ACCAAGATGG chr7:28266694-28266794 + 92 8.06e-05 NNNNNNNNNN AAGATAAG T chr12:70884545-70884645 - 38 8.06e-05 CTGGAGATCA AAGATAAG ACAATGGGTG chr4:111203042-111203142 + 93 8.06e-05 NNNNNNNNNN NAGATAAG chr16:91352912-91353012 - 37 8.06e-05 ATGGCTGGCA AAGATAAG GCTGTTTTCA chr9:42909936-42910036 - 32 8.06e-05 ATGGCTGAAC AAGATAAG AAGGGTTTTA chr5:121049616-121049716 + 24 8.06e-05 ACGAAGCCAA AAGATAAG CTTGCCAGGG chr11:87563493-87563593 - 87 8.06e-05 AAATAC AAGATAAG GTGAGGGAAG chr11:87539592-87539692 - 39 8.06e-05 TGAGAGGAGA AAGATAAG AGAGAAGCAG chr17:26651345-26651445 - 61 8.06e-05 TGTGTCCCAG AAGATAAG GACAAAGGTC chr7:28233709-28233809 + 33 9.74e-05 GTGAAAGTTC CAGATAAA GAGCCACACC chr8:87494748-87494848 - 37 9.74e-05 AGAATGGCTC CAGATAAA GCATCCTCTT chr13:74873192-74873292 + 61 9.74e-05 CTCAGTTCTA CAGATAAA AATAAACTGC chr15:56455062-56455162 - 22 9.74e-05 GTTGCAGTCA CAGATAAA ATAAATAAGC chr8:122895507-122895607 + 80 9.74e-05 CTGCTGTCTC CAGATAAA CCCTGAGGCC chr5:45951563-45951663 - 26 9.74e-05 AGTAAATGTC CAGATAAA CCTTTTTCCT chr10:57527583-57527683 + 68 9.74e-05 ATGGTCCTTT CAGATAAA AACGGTAAGG chr6:86027770-86027870 - 7 9.74e-05 CTGCCATGTT CAGATAAA GGCAGG chr12:27135942-27136042 + 41 9.74e-05 TGAGAAAACC CAGATAAA GAGGAACTGG chr1:183078713-183078813 - 28 9.74e-05 AAAAGCTCCA CAGATAAA GAGTGCTCAA chr11:84636991-84637091 + 69 1.14e-04 GAGGCCAGCA GAGATAAA GTTTTCATCA chr17:47735004-47735104 - 23 1.14e-04 ACTGGAGCCA GAGATAAA AGGCCAGAGA chr6:124614274-124614374 + 16 1.14e-04 TAGGAAGTTT GAGATAAA TTNNNNNNNN chr13:112837036-11283713 + 25 1.14e-04 TTGTAGGCAG GAGATAAA GGGACAACGG chr15:66969075-66969175 - 46 1.14e-04 CCAGAACTTA GAGATAAA GACCTGGGAG chr13:100518006-10051810 + 44 1.14e-04 AAAGAGGTGT GAGATAAA CAGGAGCGGA chr17:28946038-28946138 - 40 1.14e-04 GTAGCTAATC GAGATAAA ACCTAAGAAA chr11:32145483-32145583 + 72 1.14e-04 TCTGCAACAG GAGATAAA TGCTCCTGCC chr17:84135990-84136090 - 42 1.14e-04 GTGGTGCTCA GAGATAAA GGGAGAAGGA chr12:78031163-78031263 - 10 1.14e-04 CGTGGTCAGG GAGATAAA GATATCTGG chr8:74937708-74937808 + 92 1.31e-04 TGCAGAATGA ATGATAAG G chr13:35887679-35887779 - 17 1.31e-04 GCTGTGAACG ATGATAAG CACTTTGGGA chr9:108243078-108243178 - 74 1.31e-04 CTGGGAGGTT ATGATAAG AAACAGCTCC chr9:21940047-21940147 - 31 1.31e-04 CTAAGGCAAG ATGATAAG CCTGGACACT chr15:96173310-96173410 - 16 1.31e-04 TAAACTCACT ATGATAAG ACTTATCGAC chr11:44322387-44322487 + 62 1.31e-04 GGGAGAGACC ATGATAAG TTGCTTGTTA chr15:58828418-58828518 - 27 1.64e-04 TGTGACTGAG CTGATAAA ATGGCTGTGC chr6:34857294-34857394 - 31 1.64e-04 TGGTGAGGGA CTGATAAA TTTGGGTGTG chr7:151917812-151917912 + 56 1.64e-04 CAGATAGTCA CAGATAAC TTTCTTTTCC chr15:82060181-82060281 - 24 1.64e-04 GAACTGGACA CTGATAAA CAGGGTGGGG chr5:104483854-104483954 - 13 1.64e-04 TATTTTACTG CTGATAAA ACTGAGTGAC chr17:29575282-29575382 - 91 1.64e-04 TA CTGATAAA AGCAATCGTC chr4:129974283-129974383 - 57 1.64e-04 CCCTGTTTGT CTGATAAA GTGAGAGGGA chr16:8655669-8655769 - 15 1.64e-04 NNNNNNNTCT CTGATAAA CTCTCTCCCT chr2:25869094-25869194 - 8 1.64e-04 TAGCAGAGCG CAGATAAC AGTTCTA chr2:120881646-120881746 + 5 1.64e-04 CTGA CTGATAAA TCGAGCCATG chr5:34915765-34915865 - 13 1.64e-04 TGTGTGTGCT CTGATAAA GCTCCACAGA chr12:35474088-35474188 + 81 1.64e-04 ATGTTTATAA CTGATAAA AACCACTTGT chr7:25940384-25940484 + 46 1.64e-04 GGATCCTAGC CTGATAAA GGTGAGCTTT chr11:117642058-11764215 - 27 1.64e-04 TGCTCAGCCT CTGATAAA GAACAGTTAA chr11:32150816-32150916 + 67 1.64e-04 CTTGAACGAG CAGATAAC TAAGCCAAGC chr4:118862379-118862479 + 81 1.64e-04 CTGCCCACCC CTGATAAA GCGAGCGTTC chr5:37127173-37127273 - 22 1.64e-04 TCTGCTACTA CAGATAAC GGAGTCTCTG chr7:20321984-20322084 - 31 1.96e-04 ATGGGGCCAA GAGATAAC TCAGTGGAAG chr2:84652031-84652131 - 36 1.96e-04 NNNCTTGTTA GTGATAAA GAGGAGTAAC chr11:50038236-50038336 + 53 1.96e-04 CTGCTAGCTA GAGATAAC CTCAGCTCGG chr19:11699765-11699865 + 52 1.96e-04 CTGGACAGAA GAGATAAC AGAGCTAGCA chr16:92715756-92715856 + 79 1.96e-04 GCTCGCCCTG GAGATAAC AGCTTCACTG chr3:96232774-96232874 - 39 2.14e-04 AGGAACGTCA AAGATAAA CTCTCATCCC chr5:143814327-143814427 + 86 2.14e-04 GGGGAGACCG AAGATAAA CCCAGCC chr7:106135436-106135536 + 11 2.14e-04 ATAAGCATCA AAGATAAA GCAAAGCCTC chr4:122963963-122964063 + 11 2.14e-04 TCTTGAAAAC AAGATAAA TGTTGTACCT chr6:41654151-41654251 - 22 2.14e-04 CTGAGAAACT AAGATAAA AGAGGAGGTG chr3:19550493-19550593 + 31 2.14e-04 CTGCCCAGGG AAGATAAA GGGCGTTGGC chr10:112467640-11246774 - 1 2.14e-04 AGTTTCCCCC AAGATAAA chr13:114649129-11464922 + 1 2.14e-04 . AAGATAAA GACCCTTTCT chr11:115372411-11537251 + 27 2.14e-04 TCTGTCCCTG AAGATAAA CACATGTGCT chr3:145253490-145253590 + 50 2.14e-04 TATTTGGGGA AAGATAAA CTGCCACCAC chr11:80597916-80598016 - 67 2.47e-04 TCAGAAACCA GAGATAAN NNNNNNNNNN chr8:107486055-107486155 + 29 2.47e-04 TGCCTGTGCC CTGATAAC AGTGAGATAG chr10:20961508-20961608 + 57 2.47e-04 GGGAACCGCC CTGATAAC ATTTTGTGGT chr11:101176806-10117690 + 42 2.47e-04 TGTTGTGTCT TAGATAAG CCACGAGGCT chr2:132521379-132521479 + 53 2.47e-04 CCTGCCCTGG TAGATAAG GTGAAGACTC chr19:44460303-44460403 + 81 2.47e-04 AAAGTCCCCA TAGATAAG ATGCTAAAGA chr1:82633922-82634022 + 66 2.47e-04 TGGAGTAGTT CTGATAAC CCAGGCACAG chr11:32193432-32193532 - 12 2.47e-04 ACTCTTCCTA CTGATAAC ACAAAAGGGT chr7:148956811-148956911 + 58 2.47e-04 TGCGTTGTGG TAGATAAG CTGCTTAGCT chr4:41334757-41334857 + 70 2.47e-04 CAGTCTGGGC CTGATAAC TGGGGAGGGA chr5:139858100-139858200 - 69 2.47e-04 ATCTGGGCTC CTGATAAC CTCAGCTTTT chr9:31059930-31060030 + 6 2.47e-04 TGCTC CTGATAAC CAGAGGGGTG chr7:135432387-135432487 + 83 2.47e-04 CTGCAGCTCT CTGATAAC AGCAGGGAAG chr9:65063483-65063583 + 74 2.47e-04 CTGTTCTGCC TAGATAAG AAGTTGTCCC chr3:79383668-79383768 + 20 2.47e-04 ACAAGAACTT TAGATAAG TGAAATCTAC chr13:59915597-59915697 + 14 2.47e-04 AGGGACGGAA TAGATAAG GACACTAAGA chr10:40726422-40726522 + 90 2.47e-04 GTCTGTGAGT CTGATAAC GGG chr14:32981986-32982086 - 46 2.47e-04 CTGTTTGGCC TAGATAAG CAACTCTGGG chr3:116562119-116562219 + 85 2.47e-04 TTTGTGGCAA CTGATAAC AGGGTGTA chr3:102933242-102933342 - 65 2.47e-04 NNAGGAGCTC CTGATAAC ATAGTACCAC chr1:136638480-136638580 - 51 2.47e-04 GGTGGATGAC CTGATAAC ATAGGTGTGG chr13:73612723-73612823 - 75 2.47e-04 TCTTGAGTTC TAGATAAG CTCAGAAGAA chr15:83253022-83253122 - 10 2.63e-04 CCTGTACACA GTGATAAC CCTGGGGCC chr9:107206716-107206816 + 13 2.63e-04 GGAGGCAAGG GTGATAAC TTTGGGTGTG chr4:151334550-151334650 - 30 2.63e-04 CTTGAGGCTG GTGATAAC TAGCCTATGG chr16:44265652-44265752 + 32 2.63e-04 TGTCTGGTAG GTGATAAC AAGCTGCATC chr4:43977109-43977209 + 47 2.63e-04 GTGGTCGCCA GTGATAAC TTGCCTCCTA chr2:152650539-152650639 + 61 2.97e-04 GCACTGGGCT AAGATAAC CAGTGAGCAA chr14:70865965-70866065 - 29 2.97e-04 GCTGCCAGTA ATGATAAA GACAGTAACG chr19:24348711-24348811 + 58 2.97e-04 CCCAGGTATG AAGATAAC AGGAGAGAAG chr9:21362669-21362769 - 19 2.97e-04 CTGTACATAG AAGATAAC CAGGCATAAG chr19:5845897-5845997 + 35 2.97e-04 GTTGCAAGCT ATGATAAA GCAAGACTTT chr4:128532891-128532991 + 50 3.14e-04 TCCTTTAGAA TTGATAAG ATTCTGAAAG chr11:69793283-69793383 + 32 3.14e-04 TGCAGATTTC TTGATAAG AGCCTTCAGG chr8:24254794-24254894 - 44 3.14e-04 ATTTTTTAAA TTGATAAG TAACACATAT chr10:111261809-11126190 + 81 3.31e-04 ACACTGAGCC ATGATAAC AGCAGTTCTG chr11:94195588-94195688 - 48 3.48e-04 TGCAGGGGTG TAGATAAA AGGGAAAGCT chr2:31940723-31940823 + 16 3.48e-04 CATTAGCTTC TAGATAAA GGATAGTTTG chr2:24832339-24832439 + 16 3.48e-04 TGCCTTTCCT TAGATAAA GTAAACTCCG chr9:57618592-57618692 + 83 3.82e-04 TCTGTAGTAA TAGATAAC AGTGGAGCAG chr15:81700365-81700465 + 75 3.82e-04 AGAAATTACC TAGATAAC TAGCTGAACA chr6:132413556-132413656 + 86 3.82e-04 AAAGAAATAG TAGATAAC ACAAGTG chr13:104969483-10496958 - 81 4.16e-04 CTCTTGGCAA CAGATAAT CTTTCCGAGT chr6:38866491-38866591 - 44 4.48e-04 CTGCGGGACA GAGATAAT AACCAAGGAC chr18:57137386-57137486 - 8 4.48e-04 TCTGGAAGCA CCGATAAG GCATCAT chr19:5726887-5726987 - 78 4.63e-04 GGATGTGTGA GCGATAAG GAGTCTAATC chr5:144386181-144386281 + 53 4.63e-04 TTTGCCGTGT GCGATAAG GAAAGGATGG chr11:74652045-74652145 + 26 4.97e-04 GCTTATTTCC GTGATAAT TTTACTGACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:94858857-94858957 1.6e-05 27_[-2]_65 chr2:37405045-37405145 1.6e-05 48_[+2]_44 chr1:77295120-77295220 1.6e-05 40_[-2]_52 chr19:55940202-55940302 1.6e-05 85_[+2]_7 chr7:111007528-111007628 1.6e-05 45_[+2]_47 chr5:65203205-65203305 1.6e-05 57_[-2]_35 chr9:75406567-75406667 1.6e-05 5_[+2]_87 chr9:114375900-114376000 1.6e-05 15_[+2]_77 chr7:104332486-104332586 1.6e-05 14_[-2]_78 chr19:24354045-24354145 1.6e-05 11_[-2]_81 chr3:60623494-60623594 1.6e-05 58_[+2]_34 chr11:90524330-90524430 3.2e-05 56_[+2]_36 chr9:44096484-44096584 3.2e-05 31_[-2]_61 chr17:24339800-24339900 3.2e-05 89_[-2]_3 chr13:76003197-76003297 3.2e-05 49_[-2]_43 chr16:10384210-10384310 3.2e-05 51_[+2]_41 chr5:105994745-105994845 3.2e-05 79_[+2]_13 chr14:61272711-61272811 3.2e-05 48_[+2]_44 chr10:60612188-60612288 3.2e-05 41_[-2]_51 chr10:127624308-12762440 3.2e-05 91_[-2]_1 chr2:103324306-103324406 3.2e-05 [-2]_92 chr9:121335571-121335671 3.2e-05 11_[-2]_81 chr19:53259935-53260035 3.2e-05 38_[-2]_54 chr8:83025148-83025248 3.2e-05 90_[+2]_2 chr4:9588076-9588176 3.2e-05 18_[-2]_74 chr4:8631653-8631753 3.2e-05 76_[+2]_16 chr4:111173961-111174061 4.8e-05 48_[-2]_44 chr14:69922786-69922886 4.8e-05 77_[+2]_15 chr5:27985058-27985158 4.8e-05 35_[-2]_57 chr5:38900628-38900728 4.8e-05 86_[-2]_6 chr7:56247540-56247640 4.8e-05 25_[-2]_67 chr15:91082414-91082514 4.8e-05 85_[-2]_7 chr7:19832205-19832305 4.8e-05 17_[-2]_75 chr11:96809235-96809335 4.8e-05 24_[-2]_68 chr18:61379739-61379839 4.8e-05 35_[-2]_57 chr11:115367838-11536793 4.8e-05 55_[+2]_37 chr17:87913076-87913176 4.8e-05 68_[+2]_24 chr12:41846174-41846274 4.8e-05 85_[+2]_7 chr5:140280103-140280203 4.8e-05 31_[-2]_61 chr13:96735031-96735131 4.8e-05 56_[+2]_36 chr4:46419777-46419877 6.4e-05 74_[+2]_18 chr16:8686807-8686907 6.4e-05 71_[-2]_21 chr11:68709693-68709793 6.4e-05 77_[+2]_15 chr5:144579742-144579842 6.4e-05 70_[+2]_22 chr7:106742879-106742979 6.4e-05 10_[+2]_82 chr5:97380646-97380746 6.4e-05 23_[+2]_69 chr13:94151184-94151284 6.4e-05 37_[-2]_55 chr14:71023664-71023764 6.4e-05 56_[+2]_36 chr7:139930393-139930493 6.4e-05 72_[-2]_20 chr3:104477493-104477593 6.4e-05 68_[-2]_24 chr8:3522194-3522294 6.4e-05 92_[-2] chr7:134369100-134369200 6.4e-05 23_[-2]_69 chrX:146984102-146984202 6.4e-05 74_[+2]_18 chr3:100351338-100351438 6.4e-05 44_[-2]_48 chr7:87847379-87847479 8.1e-05 77_[+2]_15 chr6:38874024-38874124 8.1e-05 86_[+2]_6 chr11:97307228-97307328 8.1e-05 74_[-2]_18 chr8:126512498-126512598 8.1e-05 45_[-2]_47 chr5:28369133-28369233 8.1e-05 30_[-2]_62 chr9:98389941-98390041 8.1e-05 49_[-2]_43 chr15:34829703-34829803 8.1e-05 44_[+2]_48 chr7:28266694-28266794 8.1e-05 91_[+2]_1 chr12:70884545-70884645 8.1e-05 37_[-2]_55 chr4:111203042-111203142 8.1e-05 92_[+2] chr16:91352912-91353012 8.1e-05 36_[-2]_56 chr9:42909936-42910036 8.1e-05 31_[-2]_61 chr5:121049616-121049716 8.1e-05 23_[+2]_69 chr11:87563493-87563593 8.1e-05 86_[-2]_6 chr11:87539592-87539692 8.1e-05 38_[-2]_54 chr17:26651345-26651445 8.1e-05 60_[-2]_32 chr7:28233709-28233809 9.7e-05 32_[+2]_60 chr8:87494748-87494848 9.7e-05 36_[-2]_56 chr13:74873192-74873292 9.7e-05 60_[+2]_32 chr15:56455062-56455162 9.7e-05 21_[-2]_71 chr8:122895507-122895607 9.7e-05 79_[+2]_13 chr5:45951563-45951663 9.7e-05 25_[-2]_67 chr10:57527583-57527683 9.7e-05 67_[+2]_25 chr6:86027770-86027870 9.7e-05 6_[-2]_86 chr12:27135942-27136042 9.7e-05 40_[+2]_52 chr1:183078713-183078813 9.7e-05 27_[-2]_65 chr11:84636991-84637091 0.00011 68_[+2]_24 chr17:47735004-47735104 0.00011 22_[-2]_70 chr6:124614274-124614374 0.00011 15_[+2]_77 chr13:112837036-11283713 0.00011 24_[+2]_68 chr15:66969075-66969175 0.00011 45_[-2]_47 chr13:100518006-10051810 0.00011 43_[+2]_49 chr17:28946038-28946138 0.00011 39_[-2]_53 chr11:32145483-32145583 0.00011 71_[+2]_21 chr17:84135990-84136090 0.00011 41_[-2]_51 chr12:78031163-78031263 0.00011 9_[-2]_83 chr8:74937708-74937808 0.00013 91_[+2]_1 chr13:35887679-35887779 0.00013 16_[-2]_76 chr9:108243078-108243178 0.00013 73_[-2]_19 chr9:21940047-21940147 0.00013 30_[-2]_62 chr15:96173310-96173410 0.00013 15_[-2]_77 chr11:44322387-44322487 0.00013 61_[+2]_31 chr15:58828418-58828518 0.00016 26_[-2]_66 chr6:34857294-34857394 0.00016 30_[-2]_62 chr7:151917812-151917912 0.00016 55_[+2]_37 chr15:82060181-82060281 0.00016 23_[-2]_69 chr5:104483854-104483954 0.00016 12_[-2]_80 chr17:29575282-29575382 0.00016 90_[-2]_2 chr4:129974283-129974383 0.00016 56_[-2]_36 chr16:8655669-8655769 0.00016 14_[-2]_78 chr2:25869094-25869194 0.00016 7_[-2]_85 chr2:120881646-120881746 0.00016 4_[+2]_88 chr5:34915765-34915865 0.00016 12_[-2]_80 chr12:35474088-35474188 0.00016 80_[+2]_12 chr7:25940384-25940484 0.00016 45_[+2]_47 chr11:117642058-11764215 0.00016 26_[-2]_66 chr11:32150816-32150916 0.00016 66_[+2]_26 chr4:118862379-118862479 0.00016 80_[+2]_12 chr5:37127173-37127273 0.00016 21_[-2]_71 chr7:20321984-20322084 0.0002 30_[-2]_62 chr2:84652031-84652131 0.0002 35_[-2]_57 chr11:50038236-50038336 0.0002 52_[+2]_40 chr19:11699765-11699865 0.0002 51_[+2]_41 chr16:92715756-92715856 0.0002 78_[+2]_14 chr3:96232774-96232874 0.00021 38_[-2]_54 chr5:143814327-143814427 0.00021 85_[+2]_7 chr7:106135436-106135536 0.00021 10_[+2]_82 chr4:122963963-122964063 0.00021 10_[+2]_82 chr6:41654151-41654251 0.00021 21_[-2]_71 chr3:19550493-19550593 0.00021 30_[+2]_62 chr10:112467640-11246774 0.00021 [-2]_92 chr13:114649129-11464922 0.00021 [+2]_92 chr11:115372411-11537251 0.00021 26_[+2]_66 chr3:145253490-145253590 0.00021 49_[+2]_43 chr11:80597916-80598016 0.00025 66_[-2]_26 chr8:107486055-107486155 0.00025 28_[+2]_64 chr10:20961508-20961608 0.00025 56_[+2]_36 chr11:101176806-10117690 0.00025 41_[+2]_51 chr2:132521379-132521479 0.00025 52_[+2]_40 chr19:44460303-44460403 0.00025 80_[+2]_12 chr1:82633922-82634022 0.00025 65_[+2]_27 chr11:32193432-32193532 0.00025 11_[-2]_81 chr7:148956811-148956911 0.00025 57_[+2]_35 chr4:41334757-41334857 0.00025 69_[+2]_23 chr5:139858100-139858200 0.00025 68_[-2]_24 chr9:31059930-31060030 0.00025 5_[+2]_87 chr7:135432387-135432487 0.00025 82_[+2]_10 chr9:65063483-65063583 0.00025 73_[+2]_19 chr3:79383668-79383768 0.00025 19_[+2]_73 chr13:59915597-59915697 0.00025 13_[+2]_79 chr10:40726422-40726522 0.00025 89_[+2]_3 chr14:32981986-32982086 0.00025 45_[-2]_47 chr3:116562119-116562219 0.00025 84_[+2]_8 chr3:102933242-102933342 0.00025 64_[-2]_28 chr1:136638480-136638580 0.00025 50_[-2]_42 chr13:73612723-73612823 0.00025 74_[-2]_18 chr15:83253022-83253122 0.00026 9_[-2]_83 chr9:107206716-107206816 0.00026 12_[+2]_80 chr4:151334550-151334650 0.00026 29_[-2]_63 chr16:44265652-44265752 0.00026 31_[+2]_61 chr4:43977109-43977209 0.00026 46_[+2]_46 chr2:152650539-152650639 0.0003 60_[+2]_32 chr14:70865965-70866065 0.0003 28_[-2]_64 chr19:24348711-24348811 0.0003 57_[+2]_35 chr9:21362669-21362769 0.0003 18_[-2]_74 chr19:5845897-5845997 0.0003 34_[+2]_58 chr4:128532891-128532991 0.00031 49_[+2]_43 chr11:69793283-69793383 0.00031 31_[+2]_61 chr8:24254794-24254894 0.00031 43_[-2]_49 chr10:111261809-11126190 0.00033 80_[+2]_12 chr11:94195588-94195688 0.00035 47_[-2]_45 chr2:31940723-31940823 0.00035 15_[+2]_77 chr2:24832339-24832439 0.00035 15_[+2]_77 chr9:57618592-57618692 0.00038 82_[+2]_10 chr15:81700365-81700465 0.00038 74_[+2]_18 chr6:132413556-132413656 0.00038 85_[+2]_7 chr13:104969483-10496958 0.00042 80_[-2]_12 chr6:38866491-38866591 0.00045 43_[-2]_49 chr18:57137386-57137486 0.00045 7_[-2]_85 chr19:5726887-5726987 0.00046 77_[-2]_15 chr5:144386181-144386281 0.00046 52_[+2]_40 chr11:74652045-74652145 0.0005 25_[+2]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VWGATAAR width=8 seqs=176 chr11:94858857-94858957 ( 28) CAGATAAG 1 chr2:37405045-37405145 ( 49) CAGATAAG 1 chr1:77295120-77295220 ( 41) CAGATAAG 1 chr19:55940202-55940302 ( 86) CAGATAAG 1 chr7:111007528-111007628 ( 46) CAGATAAG 1 chr5:65203205-65203305 ( 58) CAGATAAG 1 chr9:75406567-75406667 ( 6) CAGATAAG 1 chr9:114375900-114376000 ( 16) CAGATAAG 1 chr7:104332486-104332586 ( 15) CAGATAAG 1 chr19:24354045-24354145 ( 12) CAGATAAG 1 chr3:60623494-60623594 ( 59) CAGATAAG 1 chr11:90524330-90524430 ( 57) GAGATAAG 1 chr9:44096484-44096584 ( 32) GAGATAAG 1 chr17:24339800-24339900 ( 90) GAGATAAG 1 chr13:76003197-76003297 ( 50) GAGATAAG 1 chr16:10384210-10384310 ( 52) GAGATAAG 1 chr5:105994745-105994845 ( 80) GAGATAAG 1 chr14:61272711-61272811 ( 49) GAGATAAG 1 chr10:60612188-60612288 ( 42) GAGATAAG 1 chr10:127624308-12762440 ( 92) GAGATAAG 1 chr2:103324306-103324406 ( 1) GAGATAAG 1 chr9:121335571-121335671 ( 12) GAGATAAG 1 chr19:53259935-53260035 ( 39) GAGATAAG 1 chr8:83025148-83025248 ( 91) GAGATAAG 1 chr4:9588076-9588176 ( 19) GAGATAAG 1 chr4:8631653-8631753 ( 77) GAGATAAG 1 chr4:111173961-111174061 ( 49) CTGATAAG 1 chr14:69922786-69922886 ( 78) CTGATAAG 1 chr5:27985058-27985158 ( 36) CTGATAAG 1 chr5:38900628-38900728 ( 87) CTGATAAG 1 chr7:56247540-56247640 ( 26) CTGATAAG 1 chr15:91082414-91082514 ( 86) CTGATAAG 1 chr7:19832205-19832305 ( 18) CTGATAAG 1 chr11:96809235-96809335 ( 25) CTGATAAG 1 chr18:61379739-61379839 ( 36) CTGATAAG 1 chr11:115367838-11536793 ( 56) CTGATAAG 1 chr17:87913076-87913176 ( 69) CTGATAAG 1 chr12:41846174-41846274 ( 86) CTGATAAG 1 chr5:140280103-140280203 ( 32) CTGATAAG 1 chr13:96735031-96735131 ( 57) CTGATAAG 1 chr4:46419777-46419877 ( 75) GTGATAAG 1 chr16:8686807-8686907 ( 72) GTGATAAG 1 chr11:68709693-68709793 ( 78) GTGATAAG 1 chr5:144579742-144579842 ( 71) GTGATAAG 1 chr7:106742879-106742979 ( 11) GTGATAAG 1 chr5:97380646-97380746 ( 24) GTGATAAG 1 chr13:94151184-94151284 ( 38) GTGATAAG 1 chr14:71023664-71023764 ( 57) GTGATAAG 1 chr7:139930393-139930493 ( 73) GTGATAAG 1 chr3:104477493-104477593 ( 69) GTGATAAG 1 chr8:3522194-3522294 ( 93) GTGATAAG 1 chr7:134369100-134369200 ( 24) GTGATAAG 1 chrX:146984102-146984202 ( 75) GTGATAAG 1 chr3:100351338-100351438 ( 45) GTGATAAG 1 chr7:87847379-87847479 ( 78) AAGATAAG 1 chr6:38874024-38874124 ( 87) AAGATAAG 1 chr11:97307228-97307328 ( 75) AAGATAAG 1 chr8:126512498-126512598 ( 46) AAGATAAG 1 chr5:28369133-28369233 ( 31) AAGATAAG 1 chr9:98389941-98390041 ( 50) AAGATAAG 1 chr15:34829703-34829803 ( 45) AAGATAAG 1 chr7:28266694-28266794 ( 92) AAGATAAG 1 chr12:70884545-70884645 ( 38) AAGATAAG 1 chr4:111203042-111203142 ( 93) NAGATAAG 1 chr16:91352912-91353012 ( 37) AAGATAAG 1 chr9:42909936-42910036 ( 32) AAGATAAG 1 chr5:121049616-121049716 ( 24) AAGATAAG 1 chr11:87563493-87563593 ( 87) AAGATAAG 1 chr11:87539592-87539692 ( 39) AAGATAAG 1 chr17:26651345-26651445 ( 61) AAGATAAG 1 chr7:28233709-28233809 ( 33) CAGATAAA 1 chr8:87494748-87494848 ( 37) CAGATAAA 1 chr13:74873192-74873292 ( 61) CAGATAAA 1 chr15:56455062-56455162 ( 22) CAGATAAA 1 chr8:122895507-122895607 ( 80) CAGATAAA 1 chr5:45951563-45951663 ( 26) CAGATAAA 1 chr10:57527583-57527683 ( 68) CAGATAAA 1 chr6:86027770-86027870 ( 7) CAGATAAA 1 chr12:27135942-27136042 ( 41) CAGATAAA 1 chr1:183078713-183078813 ( 28) CAGATAAA 1 chr11:84636991-84637091 ( 69) GAGATAAA 1 chr17:47735004-47735104 ( 23) GAGATAAA 1 chr6:124614274-124614374 ( 16) GAGATAAA 1 chr13:112837036-11283713 ( 25) GAGATAAA 1 chr15:66969075-66969175 ( 46) GAGATAAA 1 chr13:100518006-10051810 ( 44) GAGATAAA 1 chr17:28946038-28946138 ( 40) GAGATAAA 1 chr11:32145483-32145583 ( 72) GAGATAAA 1 chr17:84135990-84136090 ( 42) GAGATAAA 1 chr12:78031163-78031263 ( 10) GAGATAAA 1 chr8:74937708-74937808 ( 92) ATGATAAG 1 chr13:35887679-35887779 ( 17) ATGATAAG 1 chr9:108243078-108243178 ( 74) ATGATAAG 1 chr9:21940047-21940147 ( 31) ATGATAAG 1 chr15:96173310-96173410 ( 16) ATGATAAG 1 chr11:44322387-44322487 ( 62) ATGATAAG 1 chr15:58828418-58828518 ( 27) CTGATAAA 1 chr6:34857294-34857394 ( 31) CTGATAAA 1 chr7:151917812-151917912 ( 56) CAGATAAC 1 chr15:82060181-82060281 ( 24) CTGATAAA 1 chr5:104483854-104483954 ( 13) CTGATAAA 1 chr17:29575282-29575382 ( 91) CTGATAAA 1 chr4:129974283-129974383 ( 57) CTGATAAA 1 chr16:8655669-8655769 ( 15) CTGATAAA 1 chr2:25869094-25869194 ( 8) CAGATAAC 1 chr2:120881646-120881746 ( 5) CTGATAAA 1 chr5:34915765-34915865 ( 13) CTGATAAA 1 chr12:35474088-35474188 ( 81) CTGATAAA 1 chr7:25940384-25940484 ( 46) CTGATAAA 1 chr11:117642058-11764215 ( 27) CTGATAAA 1 chr11:32150816-32150916 ( 67) CAGATAAC 1 chr4:118862379-118862479 ( 81) CTGATAAA 1 chr5:37127173-37127273 ( 22) CAGATAAC 1 chr7:20321984-20322084 ( 31) GAGATAAC 1 chr2:84652031-84652131 ( 36) GTGATAAA 1 chr11:50038236-50038336 ( 53) GAGATAAC 1 chr19:11699765-11699865 ( 52) GAGATAAC 1 chr16:92715756-92715856 ( 79) GAGATAAC 1 chr3:96232774-96232874 ( 39) AAGATAAA 1 chr5:143814327-143814427 ( 86) AAGATAAA 1 chr7:106135436-106135536 ( 11) AAGATAAA 1 chr4:122963963-122964063 ( 11) AAGATAAA 1 chr6:41654151-41654251 ( 22) AAGATAAA 1 chr3:19550493-19550593 ( 31) AAGATAAA 1 chr10:112467640-11246774 ( 1) AAGATAAA 1 chr13:114649129-11464922 ( 1) AAGATAAA 1 chr11:115372411-11537251 ( 27) AAGATAAA 1 chr3:145253490-145253590 ( 50) AAGATAAA 1 chr11:80597916-80598016 ( 67) GAGATAAN 1 chr8:107486055-107486155 ( 29) CTGATAAC 1 chr10:20961508-20961608 ( 57) CTGATAAC 1 chr11:101176806-10117690 ( 42) TAGATAAG 1 chr2:132521379-132521479 ( 53) TAGATAAG 1 chr19:44460303-44460403 ( 81) TAGATAAG 1 chr1:82633922-82634022 ( 66) CTGATAAC 1 chr11:32193432-32193532 ( 12) CTGATAAC 1 chr7:148956811-148956911 ( 58) TAGATAAG 1 chr4:41334757-41334857 ( 70) CTGATAAC 1 chr5:139858100-139858200 ( 69) CTGATAAC 1 chr9:31059930-31060030 ( 6) CTGATAAC 1 chr7:135432387-135432487 ( 83) CTGATAAC 1 chr9:65063483-65063583 ( 74) TAGATAAG 1 chr3:79383668-79383768 ( 20) TAGATAAG 1 chr13:59915597-59915697 ( 14) TAGATAAG 1 chr10:40726422-40726522 ( 90) CTGATAAC 1 chr14:32981986-32982086 ( 46) TAGATAAG 1 chr3:116562119-116562219 ( 85) CTGATAAC 1 chr3:102933242-102933342 ( 65) CTGATAAC 1 chr1:136638480-136638580 ( 51) CTGATAAC 1 chr13:73612723-73612823 ( 75) TAGATAAG 1 chr15:83253022-83253122 ( 10) GTGATAAC 1 chr9:107206716-107206816 ( 13) GTGATAAC 1 chr4:151334550-151334650 ( 30) GTGATAAC 1 chr16:44265652-44265752 ( 32) GTGATAAC 1 chr4:43977109-43977209 ( 47) GTGATAAC 1 chr2:152650539-152650639 ( 61) AAGATAAC 1 chr14:70865965-70866065 ( 29) ATGATAAA 1 chr19:24348711-24348811 ( 58) AAGATAAC 1 chr9:21362669-21362769 ( 19) AAGATAAC 1 chr19:5845897-5845997 ( 35) ATGATAAA 1 chr4:128532891-128532991 ( 50) TTGATAAG 1 chr11:69793283-69793383 ( 32) TTGATAAG 1 chr8:24254794-24254894 ( 44) TTGATAAG 1 chr10:111261809-11126190 ( 81) ATGATAAC 1 chr11:94195588-94195688 ( 48) TAGATAAA 1 chr2:31940723-31940823 ( 16) TAGATAAA 1 chr2:24832339-24832439 ( 16) TAGATAAA 1 chr9:57618592-57618692 ( 83) TAGATAAC 1 chr15:81700365-81700465 ( 75) TAGATAAC 1 chr6:132413556-132413656 ( 86) TAGATAAC 1 chr13:104969483-10496958 ( 81) CAGATAAT 1 chr6:38866491-38866591 ( 44) GAGATAAT 1 chr18:57137386-57137486 ( 8) CCGATAAG 1 chr19:5726887-5726987 ( 78) GCGATAAG 1 chr5:144386181-144386281 ( 53) GCGATAAG 1 chr11:74652045-74652145 ( 26) GTGATAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 55800 bayes= 9.33278 E= 7.4e-025 -27 63 34 -130 116 -384 -1410 68 -1410 -1410 203 -1410 197 -1410 -1410 -1410 -1410 -1410 -1410 197 197 -1410 -1410 -1410 197 -1410 -1410 -1410 13 -41 109 -379 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 176 E= 7.4e-025 0.211682 0.376386 0.308205 0.103727 0.573864 0.017045 0.000000 0.409091 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.279864 0.183205 0.518432 0.018500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VWGATAAR MEME-2 regular expression -------------------------------------------------------------------------------- [CGA][AT]GATAA[GA] -------------------------------------------------------------------------------- Time 151.81 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 width = 29 sites = 6 llr = 177 E-value = 2.3e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 2282::8::::2:2:::288:8:83::8: pos.-specific C :7:::2::::::::a3::::::2:::8:: probability G 82282:2a8:a2a:::2822a282:a22a matrix T ::::88::2a:7:8:78:::::::7:::: bits 2.0 * ** * * * * * 1.8 * ** * * * * * 1.6 * ** * * * * * 1.4 * ********* * * ******** **** Relative 1.2 * ********* *** ******** **** Entropy 1.0 * ********* ***************** (42.7 bits) 0.8 ***************************** 0.6 ***************************** 0.4 ***************************** 0.2 ***************************** 0.0 ----------------------------- Multilevel GCAGTTAGGTGTGTCTTGAAGAGATGCAG consensus C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr19:44460303-44460403 + 26 3.52e-18 TTTGTCAGAC GCAGTTAGGTGTGTCTTGAAGAGATGCAG TTTGGGTGTG chr2:72858949-72859049 + 42 9.00e-17 CTAGTAAGAT GCAGTTAGGTGGGTCCTGAAGAGATGCAG ATTGGGTGTG chr14:55043396-55043496 - 25 3.09e-15 GCTGTCAGAT GCAGTTGGGTGTGTCCTGAAGGGAAGCAG TTAGGGTGTG chr1:183078713-183078813 - 61 3.43e-14 CCTGTCACAT GCAGTTAGGTGTGTCTTAAGGAGGTGCGG CTTGGGTGTG chr4:44016938-44017038 + 53 4.32e-13 AGTGTCTGTG AGAGGCAGTTGTGTCTGGAAGAGATGCAG TTTGGGTGTG chr5:118933399-118933499 - 47 4.06e-12 TTGTCCCAAG GAGATTAGGTGAGACTTGGAGACAAGGAG ACACCGGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:44460303-44460403 3.5e-18 25_[+3]_46 chr2:72858949-72859049 9e-17 41_[+3]_30 chr14:55043396-55043496 3.1e-15 24_[-3]_47 chr1:183078713-183078813 3.4e-14 60_[-3]_11 chr4:44016938-44017038 4.3e-13 52_[+3]_19 chr5:118933399-118933499 4.1e-12 46_[-3]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAGTTAGGTGTGTCYTGAAGAGAWGCAG width=29 seqs=6 chr19:44460303-44460403 ( 26) GCAGTTAGGTGTGTCTTGAAGAGATGCAG 1 chr2:72858949-72859049 ( 42) GCAGTTAGGTGGGTCCTGAAGAGATGCAG 1 chr14:55043396-55043496 ( 25) GCAGTTGGGTGTGTCCTGAAGGGAAGCAG 1 chr1:183078713-183078813 ( 61) GCAGTTAGGTGTGTCTTAAGGAGGTGCGG 1 chr4:44016938-44017038 ( 53) AGAGGCAGTTGTGTCTGGAAGAGATGCAG 1 chr5:118933399-118933499 ( 47) GAGATTAGGTGAGACTTGGAGACAAGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 13.2611 E= 2.3e-006 -62 -923 177 -923 -62 145 -55 -923 170 -923 -55 -923 -62 -923 177 -923 -923 -923 -55 170 -923 -55 -923 170 170 -923 -55 -923 -923 -923 203 -923 -923 -923 177 -62 -923 -923 -923 196 -923 -923 203 -923 -62 -923 -55 138 -923 -923 203 -923 -62 -923 -923 170 -923 203 -923 -923 -923 45 -923 138 -923 -923 -55 170 -62 -923 177 -923 170 -923 -55 -923 170 -923 -55 -923 -923 -923 203 -923 170 -923 -55 -923 -923 -55 177 -923 170 -923 -55 -923 38 -923 -923 138 -923 -923 203 -923 -923 177 -55 -923 170 -923 -55 -923 -923 -923 203 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 6 E= 2.3e-006 0.166667 0.000000 0.833333 0.000000 0.166667 0.666667 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.166667 0.000000 0.833333 0.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.166667 0.000000 0.833333 0.833333 0.000000 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.166667 0.000000 0.166667 0.666667 0.000000 0.000000 1.000000 0.000000 0.166667 0.000000 0.000000 0.833333 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 0.166667 0.833333 0.166667 0.000000 0.833333 0.000000 0.833333 0.000000 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.000000 0.166667 0.833333 0.000000 0.833333 0.000000 0.166667 0.000000 0.333333 0.000000 0.000000 0.666667 0.000000 0.000000 1.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGTTAGGTGTGTCYTGAAGAGAWGCAG MEME-3 regular expression -------------------------------------------------------------------------------- GCAGTTAGGTGTGTC[TC]TGAAGAGA[TA]GCAG -------------------------------------------------------------------------------- Time 220.95 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:157319654-157319754 3.42e-01 100 chr8:24254794-24254894 2.72e-01 100 chr15:76778489-76778589 1.72e-02 3_[-3(4.02e-05)]_68 chr6:57695285-57695385 3.38e-01 100 chr10:59336303-59336403 6.76e-02 15_[+1(9.34e-05)]_73 chr1:43307688-43307788 8.53e-01 100 chr4:111175597-111175697 1.96e-01 100 chr19:47458492-47458592 1.00e+00 100 chr13:73612723-73612823 2.70e-03 46_[+1(4.15e-05)]_42 chr7:16507687-16507787 3.43e-01 100 chr6:132413556-132413656 4.88e-01 100 chr10:110604367-11060446 1.24e-03 35_[+1(3.60e-06)]_53 chr3:100351338-100351438 1.66e-02 44_[-2(6.39e-05)]_48 chr2:78556314-78556414 1.96e-02 28_[+3(3.47e-05)]_43 chr18:65586913-65587013 1.00e+00 100 chr4:8631653-8631753 1.36e-02 76_[+2(3.19e-05)]_16 chr11:4232024-4232124 1.00e+00 100 chr4:143002326-143002426 4.34e-01 100 chr14:79702842-79702942 3.35e-03 52_[-1(2.44e-06)]_36 chr3:145253490-145253590 1.63e-03 60_[-1(3.60e-06)]_28 chr11:69793283-69793383 9.05e-03 49_[-1(8.56e-05)]_39 chr4:135745624-135745724 1.94e-01 100 chr1:136638480-136638580 4.87e-05 11_[-1(3.68e-07)]_77 chr10:126642275-12664237 1.14e-02 57_[-1(1.18e-05)]_31 chr18:23868475-23868575 2.01e-02 65_[+1(4.67e-06)]_23 chr6:134934721-134934821 7.71e-01 100 chr17:12397641-12397741 8.04e-01 100 chr11:44322387-44322487 1.85e-03 5_[-1(1.83e-05)]_83 chr7:106679806-106679906 4.84e-02 100 chr17:26651345-26651445 9.20e-04 60_[-2(8.06e-05)]_32 chr12:78031163-78031263 2.92e-04 19_[-1(1.64e-05)]_69 chr5:37127173-37127273 7.29e-04 85_[+2(1.60e-05)]_7 chr19:5845897-5845997 1.11e-01 100 chr1:183078713-183078813 1.11e-13 27_[-2(9.74e-05)]_11_[-1(1.01e-05)]_\ 2_[-3(3.43e-14)]_11 chr3:102933242-102933342 3.87e-02 100 chr16:91804487-91804587 1.95e-01 100 chr3:116562119-116562219 1.28e-01 100 chr13:96735031-96735131 2.14e-02 56_[+2(4.79e-05)]_36 chr6:38860749-38860849 9.94e-01 100 chr11:102226515-10222661 5.44e-01 100 chr1:9763390-9763490 6.83e-01 100 chr9:107275712-107275812 5.03e-02 100 chr6:86610037-86610137 2.98e-01 100 chr8:87362361-87362461 1.81e-03 55_[-1(5.52e-06)]_33 chr11:115626398-11562649 4.29e-01 100 chr12:112796792-11279689 5.16e-03 35_[+1(9.24e-06)]_53 chr14:32981986-32982086 6.53e-02 100 chr15:57638555-57638655 7.79e-01 100 chr1:135696217-135696317 1.31e-01 100 chr19:32372780-32372880 2.14e-01 100 chr12:70394724-70394824 8.97e-04 53_[-1(2.91e-06)]_35 chr4:118862379-118862479 2.17e-02 100 chr16:76323700-76323800 3.04e-03 65_[-1(2.61e-05)]_23 chr12:112063119-11206321 4.76e-01 100 chr7:107640798-107640898 8.08e-01 100 chr11:4577308-4577408 9.95e-01 100 chr9:66197480-66197580 6.51e-01 100 chr6:31150320-31150420 4.92e-02 100 chr18:57137386-57137486 3.81e-03 100 chr5:144386181-144386281 1.13e-01 100 chr10:69792641-69792741 1.00e+00 100 chr11:115372411-11537251 3.33e-01 100 chr11:32150816-32150916 2.95e-03 20_[+1(3.20e-05)]_68 chrX:146984102-146984202 2.96e-03 29_[-1(7.34e-05)]_33_[+2(6.39e-05)]_\ 18 chr5:65255863-65255963 2.93e-04 5_[-1(1.57e-07)]_6_[-1(1.18e-05)]_\ 24_[-1(5.52e-06)]_29 chr3:145353762-145353862 9.93e-01 100 chr6:70740089-70740189 7.32e-01 100 chr13:3345623-3345723 8.56e-01 100 chr13:114649129-11464922 1.74e-03 46_[+1(1.01e-05)]_42 chr2:25148314-25148414 4.93e-01 100 chr11:87539592-87539692 1.01e-03 19_[+1(7.90e-05)]_7_[-2(8.06e-05)]_\ 54 chr7:134369100-134369200 6.38e-03 23_[-2(6.39e-05)]_69 chr10:40726422-40726522 1.30e-03 56_[+1(4.30e-06)]_32 chr1:90207102-90207202 5.83e-01 100 chr12:27135942-27136042 2.67e-04 40_[+2(9.74e-05)]_32_[-1(4.30e-06)]_\ 8 chr2:34638536-34638636 9.59e-01 100 chr5:73746596-73746696 1.02e-02 71_[+1(2.89e-05)]_17 chr11:74652045-74652145 3.13e-01 100 chr4:9588076-9588176 1.44e-03 18_[-2(3.19e-05)]_35_[-1(2.61e-05)]_\ 27 chr11:53839886-53839986 2.88e-02 58_[-1(1.83e-05)]_30 chr2:84681994-84682094 8.30e-02 100 chr18:82836058-82836158 9.32e-01 100 chr5:140280103-140280203 4.89e-02 31_[-2(4.79e-05)]_61 chr15:41338512-41338612 6.74e-01 100 chr7:99891351-99891451 4.99e-03 19_[-1(6.19e-06)]_69 chr11:69714222-69714322 9.35e-02 100 chr1:88057039-88057139 3.85e-03 4_[+3(5.84e-05)]_67 chr11:117642058-11764215 5.20e-03 68_[+1(2.61e-05)]_20 chr17:37006052-37006152 1.43e-01 100 chr7:139969682-139969782 6.41e-04 23_[-1(1.06e-06)]_65 chr6:34428672-34428772 1.05e-01 44_[+1(4.48e-05)]_44 chrX:119944784-119944884 1.00e+00 100 chr17:84135990-84136090 3.54e-03 38_[-3(9.16e-05)]_33 chr7:91033420-91033520 3.08e-01 100 chr15:83139083-83139183 9.49e-04 21_[-1(3.60e-06)]_31_[-1(4.15e-05)]_\ 24 chr7:38963790-38963890 1.76e-01 100 chr18:54151149-54151249 4.03e-03 1_[-3(3.29e-05)]_70 chr11:87563493-87563593 6.17e-02 86_[-2(8.06e-05)]_6 chr19:45121626-45121726 6.18e-01 100 chr8:83025148-83025248 1.10e-03 90_[+2(3.19e-05)]_2 chr5:121847517-121847617 1.84e-01 100 chr11:32145483-32145583 8.88e-02 100 chr19:5922114-5922214 3.33e-01 100 chr12:41846174-41846274 3.18e-02 85_[+2(4.79e-05)]_7 chr11:61770984-61771084 1.18e-01 100 chr2:24832339-24832439 1.06e-03 43_[+1(6.19e-06)]_45 chr7:139915431-139915531 1.40e-02 47_[+1(7.12e-06)]_41 chr19:56465961-56466061 7.12e-01 100 chr12:58298568-58298668 7.93e-01 100 chr15:79757889-79757989 8.84e-01 100 chr12:71933517-71933617 7.20e-01 100 chr4:118863134-118863234 7.46e-04 49_[-1(4.15e-05)]_39 chr5:121049616-121049716 3.72e-02 23_[+2(8.06e-05)]_69 chr5:144737550-144737650 3.65e-02 100 chr4:153400586-153400686 7.74e-01 100 chr19:60889897-60889997 9.95e-01 100 chr16:49776998-49777098 8.35e-04 87_[-1(3.60e-06)]_1 chr11:121295411-12129551 5.19e-02 83_[-1(3.55e-05)]_5 chr4:118293095-118293195 1.73e-02 59_[-1(2.38e-05)]_29 chr16:32508973-32509073 1.06e-02 77_[-1(5.94e-05)]_11 chr2:167454293-167454393 9.13e-03 47_[-1(7.12e-06)]_41 chr13:59915597-59915697 2.69e-03 42_[+2(4.79e-05)]_50 chr8:3522194-3522294 9.10e-02 92_[-2(6.39e-05)] chr3:79383668-79383768 1.87e-03 48_[-1(1.45e-05)]_40 chr5:87232754-87232854 1.92e-01 100 chr6:146196315-146196415 1.00e+00 100 chr17:47754578-47754678 1.55e-01 33_[-1(8.56e-05)]_55 chr13:94158459-94158559 2.07e-01 100 chr17:28946038-28946138 4.40e-02 100 chr9:102674393-102674493 9.84e-01 100 chr7:25940384-25940484 6.94e-02 100 chr9:65063483-65063583 3.96e-02 100 chr11:90547828-90547928 1.85e-03 71_[-1(1.81e-06)]_17 chr11:57315369-57315469 6.86e-01 100 chr3:60623494-60623594 8.10e-05 31_[+1(9.24e-06)]_15_[+2(1.60e-05)]_\ 34 chr13:63465094-63465194 2.99e-01 100 chr14:63796625-63796725 9.40e-03 48_[-1(4.99e-06)]_40 chr4:32949805-32949905 4.15e-02 100 chr6:149136525-149136625 9.29e-01 100 chr10:112467640-11246774 3.65e-01 100 chr10:59711554-59711654 1.00e+00 100 chr5:37112214-37112314 7.65e-03 54_[+1(5.40e-05)]_34 chr10:128184602-12818470 1.24e-01 100 chr16:92715756-92715856 4.19e-03 100 chr9:64640064-64640164 4.05e-01 100 chr3:103708583-103708683 1.19e-01 100 chr6:136416749-136416849 2.67e-01 100 chr9:104996244-104996344 7.28e-01 100 chr2:157978335-157978435 5.88e-03 45_[-1(1.01e-05)]_43 chr7:128009271-128009371 1.12e-01 100 chr13:112511937-11251203 9.08e-01 100 chr2:28928358-28928458 2.91e-01 100 chr13:34169859-34169959 4.04e-01 100 chr12:35474088-35474188 4.47e-02 100 chr3:104477493-104477593 1.80e-01 68_[-2(6.39e-05)]_24 chr5:34915765-34915865 7.55e-04 43_[-1(7.34e-05)]_45 chr1:60399688-60399788 5.94e-01 100 chr8:107823856-107823956 4.75e-05 30_[+1(3.60e-06)]_58 chr2:153321068-153321168 2.89e-01 100 chr1:133343881-133343981 7.80e-04 38_[+1(1.49e-06)]_50 chr7:128850881-128850981 2.80e-02 2_[+1(8.29e-06)]_86 chr12:112505813-11250591 6.10e-02 56_[+1(5.94e-05)]_32 chr3:30811841-30811941 5.57e-01 100 chr6:57653287-57653387 3.64e-02 41_[-1(2.38e-05)]_17_[-1(6.44e-05)]_\ 18 chr4:106351518-106351618 3.13e-01 100 chr11:61773534-61773634 9.83e-01 100 chr12:16754496-16754596 8.02e-01 100 chr3:68858678-68858778 1.61e-01 100 chr9:70774506-70774606 1.40e-02 27_[-1(3.20e-05)]_33_[+1(7.34e-05)]_\ 16 chr15:78888125-78888225 2.89e-02 37_[-3(1.07e-05)]_34 chr8:125244307-125244407 8.85e-01 100 chr15:81700365-81700465 6.42e-05 33_[-1(2.91e-06)]_55 chr10:60585889-60585989 6.63e-01 100 chr2:91483170-91483270 3.04e-01 100 chr7:135432387-135432487 1.52e-02 59_[-1(9.34e-05)]_29 chr1:122155870-122155970 4.39e-01 100 chr9:57147431-57147531 1.00e+00 100 chr14:63729027-63729127 4.83e-01 100 chr9:42909936-42910036 1.48e-02 31_[-2(8.06e-05)]_61 chr5:118933399-118933499 2.31e-10 2_[-1(2.38e-05)]_32_[-3(4.06e-12)]_\ 25 chr11:115374472-11537457 7.09e-03 31_[-1(2.04e-05)]_57 chr19:53259935-53260035 1.53e-05 11_[+1(2.62e-07)]_15_[-2(3.19e-05)]_\ 54 chr3:107899564-107899664 3.33e-01 100 chr4:119486253-119486353 1.46e-01 100 chr19:45865025-45865125 3.16e-02 57_[-1(3.55e-05)]_31 chr16:91352912-91353012 3.46e-05 36_[-2(8.06e-05)]_16_[-1(2.62e-07)]_\ 28 chr9:121335571-121335671 8.92e-03 11_[-2(3.19e-05)]_81 chr15:78243388-78243488 1.56e-02 37_[+1(2.04e-05)]_51 chr9:40980319-40980419 8.29e-02 100 chr2:103324306-103324406 1.50e-02 [-2(3.19e-05)]_92 chr4:116666091-116666191 1.70e-01 100 chr2:167169231-167169331 1.34e-01 4_[-3(8.41e-05)]_67 chr11:102236403-10223650 7.63e-03 13_[-1(5.94e-05)]_75 chr10:128286730-12828683 9.15e-01 100 chr17:87913076-87913176 5.55e-04 29_[-3(9.16e-05)]_10_[+2(4.79e-05)]_\ 24 chr7:111019146-111019246 5.82e-02 100 chr15:73181610-73181710 9.21e-02 72_[-1(8.56e-05)]_16 chr9:66763904-66764004 1.45e-02 26_[+1(4.90e-05)]_62 chr7:139930393-139930493 4.43e-03 72_[-2(6.39e-05)]_20 chr9:31059930-31060030 7.80e-04 17_[+1(7.12e-06)]_71 chr15:76083898-76083998 1.17e-04 50_[-1(2.62e-07)]_6_[-1(2.12e-06)]_\ 20 chr13:98513310-98513410 2.63e-01 100 chr2:93306455-93306555 1.19e-02 30_[+1(1.45e-05)]_58 chr14:69939825-69939925 8.81e-02 100 chr1:70948719-70948819 1.00e+00 100 chr10:127624308-12762440 1.14e-01 91_[-2(3.19e-05)]_1 chr5:104188913-104189013 5.93e-01 100 chr4:126645607-126645707 5.85e-01 100 chr6:86027770-86027870 2.20e-05 6_[-2(9.74e-05)]_12_[+1(1.57e-07)]_\ 62 chr14:71023664-71023764 9.35e-02 56_[+2(6.39e-05)]_36 chr2:130961394-130961494 2.94e-02 100 chr11:115367838-11536793 1.32e-04 55_[+2(4.79e-05)]_16_[-1(2.91e-06)]_\ 9 chr4:111203042-111203142 2.09e-01 92_[+2(8.06e-05)] chr11:57590458-57590558 7.10e-01 100 chr15:96173310-96173410 2.48e-01 100 chr11:115373881-11537398 1.06e-02 75_[-1(1.29e-05)]_13 chr11:115139144-11513924 2.58e-01 100 chr18:61379739-61379839 2.50e-05 35_[-2(4.79e-05)]_14_[-1(3.68e-07)]_\ 31 chr10:126640070-12664017 5.71e-01 100 chr15:95715578-95715678 8.27e-03 67_[+1(2.04e-05)]_[+1(2.22e-05)]_9 chr13:47204524-47204624 1.00e+00 100 chr9:112905109-112905209 2.83e-03 84_[+1(2.62e-07)]_4 chr3:51034099-51034199 4.32e-01 100 chr17:48438405-48438505 3.74e-02 53_[+1(5.40e-05)]_35 chr8:122302551-122302651 2.15e-01 100 chr13:94151184-94151284 3.86e-02 37_[-2(6.39e-05)]_55 chr4:132847119-132847219 5.53e-03 32_[+1(1.18e-05)]_56 chr11:95661713-95661813 1.17e-01 100 chr5:144685595-144685695 3.66e-01 100 chr11:121294773-12129487 3.24e-02 100 chr6:82964291-82964391 9.88e-01 100 chr17:29067181-29067281 3.25e-03 9_[-1(1.09e-05)]_23_[+1(8.56e-05)]_\ 44 chr6:121187423-121187523 5.79e-01 100 chr17:24289203-24289303 1.61e-02 49_[+1(3.20e-05)]_6_[-1(4.48e-05)]_\ 21 chr2:72858949-72859049 9.88e-15 41_[+3(9.00e-17)]_2_[+1(1.01e-05)]_\ 16 chr5:117587452-117587552 5.12e-01 100 chr12:80012615-80012715 5.65e-03 16_[-1(1.49e-06)]_72 chr6:56860898-56860998 1.00e+00 100 chr2:84852384-84852484 8.61e-01 100 chr13:112833728-11283382 4.37e-04 35_[+1(2.62e-07)]_53 chr10:57527583-57527683 4.09e-04 32_[-1(1.96e-06)]_23_[+2(9.74e-05)]_\ 25 chr10:76673547-76673647 3.34e-01 100 chr5:17334950-17335050 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chr8:98213263-98213363 5.49e-01 100 chr15:27299345-27299445 8.23e-01 100 chr2:31917150-31917250 8.26e-01 100 chr10:59465793-59465893 4.06e-01 100 chr18:32716207-32716307 5.59e-01 100 chr3:96232774-96232874 2.04e-02 100 chr6:131327330-131327430 1.00e+00 100 chr18:34136392-34136492 8.43e-01 100 chr13:104969483-10496958 1.42e-02 100 chr4:154282316-154282416 9.86e-01 100 chr4:134960760-134960860 4.91e-02 41_[+1(6.88e-05)]_47 chr8:51109537-51109637 1.00e+00 100 chr15:83253022-83253122 1.13e-02 100 chr5:118929925-118930025 1.54e-02 28_[+1(2.38e-05)]_60 chr15:58828418-58828518 1.97e-04 73_[-1(3.68e-07)]_15 chr11:105013712-10501381 1.21e-01 100 chr7:87847379-87847479 4.40e-02 77_[+2(8.06e-05)]_15 chr13:114606034-11460613 3.68e-01 100 chr4:46419777-46419877 6.45e-03 74_[+2(6.39e-05)]_18 chr5:33616212-33616312 8.26e-03 52_[-1(1.49e-06)]_36 chr11:90524330-90524430 1.69e-05 25_[+1(6.89e-07)]_19_[+2(3.19e-05)]_\ 36 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: glutamine.gs.washington.edu ********************************************************************************