R: Retrieve QC probeset names for the current array type

qc.get.probes {simpleaffy}

R Documentation

Retrieve QC probeset names for the current array type

Description

Get the names of probesets used to calculate 3'/5' ratios for the current array type. qc.get.spikes is used to set the spike probe names (i.e. bioB, bioC, etc.)

Usage

 qc.get.probes()
 qc.get.probe(name)
 qc.add.probe(name,probeset)

Arguments

`name`	A name for the given probeset. By default, this is the probeset identifier
`probeset`	A probeset ID

Value

A character array of probeset IDs, or the requested probeset ID, as appropriate.

Author(s)

Crispin J Miller

References

http://bioinformatics.picr.man.ac.uk/

Examples

  setQCEnvironment("hgu133plus2cdf")
  qc.get.probes()
  qc.add.probe("my.name","a.probesetid_at")
  qc.add.probe("another.name","another.probesetid_at")
  qc.get.probes()

[Package simpleaffy version 2.54.0 Index]