TENTATIVE OUTLINE
Monday January 31
L1: (MK) Introduction and evolving probabilities
Wednesday February 2
L2: (LM in person) Elements of population genetics
Friday February 4
L3: (LM in person) Fitness landscapes
Monday February 7
L4: (LM in person) Population genetics of cancer
Wednesday February 9
L5: (MK) Forward Kolmogorov equation
Friday February 11
L6: (MK) Backward Kolmogorov equation
Monday February 14
L7: (AKC) viral fitness landscapes I
Wednesday February 16
L8: (AKC) viral fitness landscapes II
Friday February 18
No class, Assignment 1 due
Monday, February 21 (MIT Holiday)
Tuesday February 22 (MIT Monday schedule) No class
Wednesday, February 23
L9: (MK) Electrostatic forces
Friday, February 25
L10 (LM via zoom) Forces in biology
Monday February 28
L11 (MK) polymer phases
Wednesday March 2
L12 (MK) Compact polymers and REM
Friday March 4
No class, Assignment 2 due
Monday March 7
L13 (LM via zoom) protein folding energetics
Wednesday March 9
L14 (LM via zoom) protein folding kinetics
Friday March 11
No class, Final project proposal due
Monday March 14
L15 (MK) DNA
Wednesday March 16
L16 (MK) RNA
Friday 3/18
No class, Assignment 3 due
Monday 3/21 - Friday 3/25 MIT Spring break
Monday 3/28
L17 (MK) Microtubules
Wednesday 3/30
L18 (MK) Motors
Friday April 1
L19 (LM via zoom) Cooperativity
Monday April 4
L20 (LM via zoom) protein-DNA energetics
Wednesday April 6
L21 (LM via zoom) protein-DNA kinetics
Friday April 8
No class, Assignment 4 due
Monday April 11
L22 (AKC) Thymic selection
Wednesday April 13
L23 (AKC) Affinity maturation
Friday April 15
L24 (LM via zoom) Introduction to networks
(AKC may need the first 1/2 hour to finish his block of lectures)
Monday 4/18
MIT Holiday
Wednesday 4/20
L25 (MK) Network structure
Friday 4/22
No class
Assignment 5 due
Monday 4/25
L26 (MK) Dynamics on a network
Wednesday 4/27
L27 (MK) Clocks
Friday April 29
L28 (MK) patterns
Monday May 2
L29 (LM in person) Chromatin 1
Wednesday May 4
L30 (LM in person) Chromatin 2
Friday May 6
No class, Assignment 6 due
Monday May 9
L31 (LM) Chromatin 3 (if needed)