Summary motif results ===================== mfinder Version 1.20 MOTIF FINDER RESULTS: Network name: C_elegans.txt Network type: Directed Num of Nodes: 306 Num of Edges: 2345 Num of Nodes with edges: 297 Maximal out degree (out-hub) : 39 Maximal in degree (in-hub) : 134 Roots num: 27 Leaves num: 3 Single Edges num: 1951 Mutual Edges num: 197 Motif size searched 4 Total number of 4-node subgraphs : 1394259 Number of random networks generated : 20 Random networks generation method: Switches (with metropolis) The following motifs were found: Criteria taken : Nreal Zscore > 2.00 Pval ignored (due to small number of random networks) Mfactor > 1.10 Uniqueness >= 4 Top Motifs List MOTIF NREAL NRAND NREAL NREAL UNIQ CREAL ID STATS ZSCORE PVAL VAL [MILI] 222 1665 670.0+-75.2 13.23 0.000 20 1.19 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 904 5110 2316.3+-124.0 22.52 0.000 26 3.67 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 906 2110 1567.0+-96.5 5.63 0.000 24 1.51 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 908 1200 862.7+-59.9 5.63 0.000 23 0.86 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 922 2199 907.7+-148.6 8.69 0.000 19 1.58 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 926 586 288.6+-36.9 8.06 0.000 14 0.42 0 1 1 1 1 0 0 1 1 1 0 0 0 0 0 0 4548 759 573.5+-49.4 3.76 0.000 24 0.54 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 (Total No. of non-dangling motifs : 17) Full list includes 35 motifs MOTIF NREAL NRAND NREAL NREAL UNIQ CREAL ID STATS ZSCORE PVAL VAL [MILI] 14 30403 26309.2+-264.9 15.45 0.000 40 21.81 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 28 85447 74364.3+-562.9 19.69 0.000 41 61.28 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 30 14563 12752.6+-295.5 6.13 0.000 37 10.44 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 90 9561 7886.1+-389.0 4.31 0.000 29 6.86 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 222 1665 670.0+-75.2 13.23 0.000 20 1.19 0 1 1 1 1 0 1 1 0 0 0 0 0 0 0 0 286 2442 2096.1+-89.9 3.85 0.000 27 1.75 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 344 13141 9540.5+-421.3 8.55 0.000 30 9.43 0 0 0 1 1 0 1 0 1 0 0 0 0 0 0 0 346 1602 1240.9+-118.6 3.04 0.000 19 1.15 0 1 0 1 1 0 1 0 1 0 0 0 0 0 0 0 390 17777 15214.0+-388.1 6.60 0.000 35 12.75 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 398 2195 1794.6+-127.1 3.15 0.000 28 1.57 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 410 7945 6428.1+-266.6 5.69 0.000 29 5.70 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 856 4008 3168.3+-136.3 6.16 0.000 24 2.87 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 0 904 5110 2316.3+-124.0 22.52 0.000 26 3.67 0 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 906 2110 1567.0+-96.5 5.63 0.000 24 1.51 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 908 1200 862.7+-59.9 5.63 0.000 23 0.86 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 922 2199 907.7+-148.6 8.69 0.000 19 1.58 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 926 586 288.6+-36.9 8.06 0.000 14 0.42 0 1 1 1 1 0 0 1 1 1 0 0 0 0 0 0 972 248 117.6+-14.1 9.25 0.000 13 0.18 0 0 1 1 0 0 1 1 1 1 0 0 0 0 0 0 990 105 78.0+-9.5 2.84 0.000 8 0.08 0 1 1 1 1 0 1 1 1 1 0 0 0 0 0 0 2184 384900 338577.9+-1781.9 26.00 0.000 48 276.06 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 4374 2322 2043.6+-81.9 3.40 0.000 19 1.67 0 1 1 0 1 0 0 0 1 0 0 0 1 0 0 0 4382 163 130.1+-8.9 3.69 0.000 16 0.12 0 1 1 1 1 0 0 0 1 0 0 0 1 0 0 0 4420 9033 7243.4+-458.3 3.91 0.000 29 6.48 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 4438 1110 914.0+-67.9 2.89 0.000 16 0.80 0 1 1 0 1 0 1 0 1 0 0 0 1 0 0 0 4440 1892 1325.8+-69.5 8.15 0.000 30 1.36 0 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 4546 56 33.3+-8.6 2.65 0.000 6 0.04 0 1 0 0 0 0 1 1 1 0 0 0 1 0 0 0 4548 759 573.5+-49.4 3.76 0.000 24 0.54 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 4556 217 85.8+-13.6 9.65 0.000 16 0.16 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 0 4952 545 475.4+-33.5 2.08 0.000 18 0.39 0 0 0 1 1 0 1 0 1 1 0 0 1 0 0 0 5064 112 67.3+-10.5 4.25 0.000 13 0.08 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 0 5068 58 38.8+-7.6 2.52 0.050 9 0.04 0 0 1 1 0 0 1 1 1 1 0 0 1 0 0 0 5070 31 18.3+-4.4 2.88 0.000 5 0.02 0 1 1 1 0 0 1 1 1 1 0 0 1 0 0 0 6552 803 542.9+-77.9 3.34 0.000 18 0.58 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 13260 8 1.7+-1.4 4.44 0.000 5 0.01 0 0 1 1 0 0 1 1 1 1 0 0 1 1 0 0 13262 28 6.7+-3.1 6.77 0.000 4 0.02 0 1 1 1 0 0 1 1 1 1 0 0 1 1 0 0 Full list of subgraphs size 4 ids: ( Total num of different subgraphs size 4 is : 199 ) MOTIF NREAL NRAND NREAL NREAL CREAL UNIQ ID STATS ZSCORE PVAL [MILI] 14 30403 26309.2+-264.9 15.45 0.000 21.81 40 28 85447 74364.3+-562.9 19.69 0.000 61.28 41 30 14563 12752.6+-295.5 6.13 0.000 10.44 37 74 84670 82064.6+-1197.5 2.18 0.050 60.73 44 76 121601 175436.9+-2835.7 -18.98 1.000 87.22 47 78 12524 13062.9+-174.4 -3.09 1.000 8.98 35 90 9561 7886.1+-389.0 4.31 0.000 6.86 29 92 11165 16096.2+-567.7 -8.69 1.000 8.01 35 94 6167 7170.3+-209.1 -4.80 1.000 4.42 28 204 3184 2933.2+-164.5 1.53 0.100 2.28 29 206 1001 1114.4+-86.2 -1.32 0.950 0.72 28 222 1665 670.0+-75.2 13.23 0.000 1.19 20 280 95347 88850.3+-663.3 9.79 0.000 68.39 39 282 22448 22386.9+-719.7 0.08 0.450 16.10 28 286 2442 2096.1+-89.9 3.85 0.000 1.75 27 328 64639 63821.4+-891.0 0.92 0.200 46.36 42 330 1712 1938.7+-87.0 -2.61 1.000 1.23 14 332 14861 15184.5+-511.4 -0.63 0.800 10.66 32 334 1197 1376.1+-88.0 -2.04 1.000 0.86 23 344 13141 9540.5+-421.3 8.55 0.000 9.43 30 346 1602 1240.9+-118.6 3.04 0.000 1.15 19 348 4003 4855.9+-237.3 -3.59 1.000 2.87 24 350 890 893.5+-54.2 -0.06 0.450 0.64 18 390 17777 15214.0+-388.1 6.60 0.000 12.75 35 392 132325 137490.8+-2920.2 -1.77 1.000 94.91 47 394 11276 10893.0+-477.4 0.80 0.250 8.09 36 396 25807 28182.7+-662.6 -3.59 1.000 18.51 35 398 2195 1794.6+-127.1 3.15 0.000 1.57 28 404 15407 17298.6+-303.4 -6.24 1.000 11.05 33 406 3604 3728.3+-138.1 -0.90 0.800 2.58 22 408 12715 18368.5+-420.1 -13.46 1.000 9.12 36 410 7945 6428.1+-266.6 5.69 0.000 5.70 29 412 1811 1989.3+-97.1 -1.84 1.000 1.30 27 414 1081 1063.7+-49.3 0.35 0.400 0.78 20 454 1041 1818.0+-77.7 -10.00 1.000 0.75 20 456 3443 4095.1+-165.2 -3.95 1.000 2.47 29 458 210 285.6+-32.0 -2.36 1.000 0.15 14 460 1064 1105.8+-72.6 -0.58 0.600 0.76 27 462 141 230.3+-21.8 -4.09 1.000 0.10 17 468 1692 2441.9+-138.4 -5.42 1.000 1.21 24 470 802 1175.8+-65.7 -5.69 1.000 0.58 20 472 929 1131.0+-74.1 -2.73 1.000 0.67 29 474 404 460.1+-41.2 -1.36 0.950 0.29 17 476 315 567.8+-37.9 -6.66 1.000 0.23 19 478 335 311.9+-28.7 0.81 0.150 0.24 16 856 4008 3168.3+-136.3 6.16 0.000 2.87 24 858 1030 1126.8+-87.7 -1.10 0.900 0.74 16 862 228 303.3+-23.0 -3.28 1.000 0.16 11 904 5110 2316.3+-124.0 22.52 0.000 3.67 26 906 2110 1567.0+-96.5 5.63 0.000 1.51 24 908 1200 862.7+-59.9 5.63 0.000 0.86 23 910 517 670.5+-39.5 -3.89 1.000 0.37 23 922 2199 907.7+-148.6 8.69 0.000 1.58 19 924 174 187.2+-21.6 -0.61 0.700 0.12 18 926 586 288.6+-36.9 8.06 0.000 0.42 14 972 248 117.6+-14.1 9.25 0.000 0.18 13 974 151 126.7+-13.7 1.78 0.000 0.11 12 990 105 78.0+-9.5 2.84 0.000 0.08 8 2184 384900 338577.9+-1781.9 26.00 0.000 276.06 48 2186 60269 84517.3+-1196.9 -20.26 1.000 43.23 38 2190 1343 2557.0+-162.8 -7.46 1.000 0.96 27 2202 7966 19094.1+-572.1 -19.45 1.000 5.71 33 2204 1503 5161.1+-212.5 -17.22 1.000 1.08 28 2206 691 1918.6+-80.0 -15.35 1.000 0.50 24 2252 2436 4374.3+-172.1 -11.26 1.000 1.75 28 2254 491 1128.8+-74.8 -8.52 1.000 0.35 20 2270 277 499.8+-36.0 -6.19 1.000 0.20 15 2458 890 2151.8+-84.8 -14.88 1.000 0.64 26 2462 247 426.5+-19.4 -9.26 1.000 0.18 13 2506 14 69.2+-10.7 -5.17 1.000 0.01 7 2510 151 281.9+-22.2 -5.90 1.000 0.11 15 2524 166 431.1+-38.7 -6.86 1.000 0.12 13 2526 192 316.3+-21.6 -5.76 1.000 0.14 13 3038 11 41.5+-4.9 -6.16 1.000 0.01 4 4370 12890 13266.5+-440.5 -0.85 0.800 9.25 31 4374 2322 2043.6+-81.9 3.40 0.000 1.67 19 4382 163 130.1+-8.9 3.69 0.000 0.12 16 4418 1470 2306.2+-95.4 -8.77 1.000 1.05 12 4420 9033 7243.4+-458.3 3.91 0.000 6.48 29 4422 857 1190.8+-111.1 -3.01 1.000 0.61 18 4424 10518 13616.3+-322.5 -9.61 1.000 7.54 33 4426 296 274.4+-34.1 0.63 0.250 0.21 16 4428 3348 3546.5+-108.7 -1.83 0.950 2.40 22 4430 190 208.1+-18.0 -1.01 0.850 0.14 15 4434 1561 1536.1+-87.0 0.29 0.350 1.12 22 4436 5678 5728.3+-214.0 -0.23 0.650 4.07 25 4438 1110 914.0+-67.9 2.89 0.000 0.80 16 4440 1892 1325.8+-69.5 8.15 0.000 1.36 30 4442 229 215.6+-20.6 0.65 0.150 0.16 16 4444 653 839.3+-49.4 -3.77 1.000 0.47 19 4446 182 161.3+-13.6 1.52 0.100 0.13 12 4546 56 33.3+-8.6 2.65 0.000 0.04 6 4548 759 573.5+-49.4 3.76 0.000 0.54 24 4550 37 33.8+-9.2 0.35 0.300 0.03 8 4556 217 85.8+-13.6 9.65 0.000 0.16 16 4558 13 14.5+-4.1 -0.36 0.750 0.01 6 4562 51 57.6+-8.5 -0.78 0.750 0.04 8 4564 317 370.2+-33.3 -1.60 1.000 0.23 18 4566 69 68.9+-12.7 0.01 0.400 0.05 12 4572 86 108.7+-14.9 -1.52 0.900 0.06 9 4574 35 25.9+-6.1 1.51 0.100 0.03 6 4678 1175 2050.1+-211.8 -4.13 1.000 0.84 18 4682 2928 3288.5+-95.6 -3.77 1.000 2.10 26 4686 333 415.1+-39.4 -2.08 1.000 0.24 16 4692 1028 2166.2+-140.2 -8.12 1.000 0.74 20 4694 647 1045.4+-72.4 -5.50 1.000 0.46 19 4698 347 436.1+-21.6 -4.12 1.000 0.25 14 4700 191 259.9+-28.5 -2.41 1.000 0.14 16 4702 134 190.1+-14.3 -3.92 1.000 0.10 11 4740 118 360.4+-32.3 -7.50 1.000 0.08 16 4742 104 161.8+-24.4 -2.37 1.000 0.07 10 4748 195 408.3+-33.9 -6.30 1.000 0.14 15 4750 77 136.2+-20.1 -2.95 1.000 0.06 12 4758 26 36.2+-9.8 -1.04 0.850 0.02 6 4764 43 77.7+-10.3 -3.36 1.000 0.03 10 4766 39 58.6+-9.3 -2.12 1.000 0.03 9 4812 70 65.6+-13.3 0.33 0.350 0.05 12 4814 39 69.1+-10.8 -2.79 1.000 0.03 7 4830 18 21.3+-4.2 -0.79 0.850 0.01 5 4946 1216 1372.2+-69.0 -2.26 1.000 0.87 15 4950 243 301.4+-30.4 -1.92 1.000 0.17 10 4952 545 475.4+-33.5 2.08 0.000 0.39 18 4954 152 198.1+-18.7 -2.46 1.000 0.11 13 4958 50 58.0+-6.1 -1.31 0.950 0.04 8 4994 187 337.1+-43.5 -3.45 1.000 0.13 13 4998 61 107.8+-14.7 -3.19 1.000 0.04 8 5002 159 179.3+-17.7 -1.15 0.800 0.11 14 5004 77 124.3+-14.9 -3.18 1.000 0.06 12 5006 47 82.1+-13.3 -2.65 1.000 0.03 9 5010 296 428.3+-58.9 -2.25 0.950 0.21 16 5012 80 113.3+-21.8 -1.53 0.950 0.06 11 5014 56 63.0+-10.3 -0.68 0.700 0.04 11 5016 331 409.4+-44.6 -1.76 0.950 0.24 19 5018 200 246.1+-30.4 -1.52 0.950 0.14 12 5020 47 61.7+-11.5 -1.28 0.900 0.03 6 5022 30 43.5+-7.6 -1.77 0.950 0.02 8 5058 42 44.1+-12.2 -0.17 0.500 0.03 8 5062 23 22.7+-4.9 0.06 0.600 0.02 5 5064 112 67.3+-10.5 4.25 0.000 0.08 13 5066 18 24.6+-5.4 -1.22 0.900 0.01 7 5068 58 38.8+-7.6 2.52 0.050 0.04 9 5070 31 18.3+-4.4 2.88 0.000 0.02 5 5074 66 78.1+-10.2 -1.19 0.900 0.05 9 5076 50 84.6+-12.1 -2.86 1.000 0.04 8 5078 13 35.5+-7.3 -3.07 1.000 0.01 4 5080 160 219.7+-19.8 -3.02 1.000 0.11 14 5082 25 44.2+-8.1 -2.36 1.000 0.02 8 5084 31 50.4+-7.6 -2.54 1.000 0.02 7 5086 11 23.8+-5.8 -2.20 1.000 0.01 6 6342 16 18.5+-7.2 -0.35 0.550 0.01 6 6348 221 249.2+-35.4 -0.80 0.800 0.16 17 6350 20 41.0+-10.1 -2.08 1.000 0.01 7 6356 10 29.9+-8.4 -2.37 1.000 0.01 6 6358 16 30.1+-7.8 -1.82 1.000 0.01 5 6364 112 116.0+-21.6 -0.18 0.500 0.08 6 6366 25 50.0+-10.8 -2.30 1.000 0.02 8 6550 17 18.9+-5.2 -0.36 0.650 0.01 6 6552 803 542.9+-77.9 3.34 0.000 0.58 18 6554 365 328.9+-33.0 1.10 0.200 0.26 13 6558 26 28.3+-6.6 -0.34 0.600 0.02 6 6598 6 8.3+-3.6 -0.62 0.700 0.00 3 6602 14 20.5+-8.1 -0.80 0.750 0.01 6 6604 134 117.3+-17.4 0.96 0.200 0.10 10 6606 8 15.7+-6.3 -1.21 1.000 0.01 5 6614 7 18.6+-6.7 -1.72 1.000 0.01 3 6616 125 116.3+-19.3 0.45 0.400 0.09 11 6618 37 38.4+-9.0 -0.15 0.550 0.03 9 6620 109 121.5+-19.6 -0.63 0.900 0.08 10 6622 15 23.9+-6.8 -1.31 0.950 0.01 3 6854 5 6.5+-2.1 -0.73 0.850 0.00 4 6858 52 77.8+-11.6 -2.23 1.000 0.04 12 6862 7 17.6+-7.3 -1.46 0.950 0.01 4 6870 5 11.2+-4.8 -1.30 0.950 0.00 2 6874 35 52.1+-7.7 -2.22 1.000 0.03 8 6876 12 33.4+-8.5 -2.51 1.000 0.01 6 6878 10 19.9+-4.9 -2.01 1.000 0.01 5 7126 4 8.5+-2.6 -1.75 1.000 0.00 3 7128 50 67.0+-9.0 -1.89 1.000 0.04 8 7130 31 48.5+-11.8 -1.48 0.900 0.02 6 7134 4 8.8+-3.6 -1.32 1.000 0.00 3 13142 74 67.3+-17.8 0.37 0.250 0.05 7 13146 28 22.9+-6.3 0.82 0.250 0.02 6 13148 11 18.3+-4.6 -1.60 0.950 0.01 5 13150 22 23.1+-4.2 -0.26 0.600 0.02 7 13260 8 1.7+-1.4 4.44 0.000 0.01 5 13262 28 6.7+-3.1 6.77 0.000 0.02 4 13278 1 2.9+-1.4 -1.35 1.000 0.00 1 14678 8 10.6+-4.1 -0.63 0.700 0.01 4 14686 1 2.0+-1.5 -0.65 0.800 0.00 1 14790 2 0.8+-1.0 1.11 0.200 0.00 1 14798 5 7.8+-3.6 -0.78 0.750 0.00 3 14810 8 7.3+-3.0 0.23 0.550 0.01 5 14812 6 17.8+-6.1 -1.95 1.000 0.00 2 14814 7 8.1+-3.7 -0.28 0.600 0.01 4 15258 0 16.5+-7.3 -2.27 1.000 0.00 0 15262 4 9.6+-4.3 -1.30 0.950 0.00 4 15310 15 5.0+-3.3 3.05 0.000 0.01 3 15326 4 4.0+-2.2 0.02 0.650 0.00 2 31710 0 0.1+-0.2 -0.22 1.000 0.00 0 (Application total runtime was: 8.60 hours.) (Real network processing runtime was: 53.0 seconds.) (Single Random network processing runtime was: 25.76 minutes).