available.species {GenomeInfoDb} | R Documentation |
NCBI maintains a collection of unique taxonomy Ids and pairs these with associated genus and species designations. This function returns the set of pre-processed values that we use to check that something is a valid Taxonomy ID (or species name)
available.species()
A data frame with 1 row per species designation and two columns. The 1st column is the taxonomy Id. The second columns is the species name.
Marc Carlson
## get the data spec <- available.species() tail(spec) ## which can then be searched etc. spec[grepl('yoelii',spec$species),]