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Glycan Array Screening

Glycan Array Displayed in Symbol Format

Version 2.3 Available as of April 2004

(click here for a printable version)

ID No. Glycan Structure¹ Trivial Name Carb ID

01 -OCH₂(CH₂)₂NH-CO(CH₂)₅NH-Biotin Spacer Arm 2 500-BM

02 a-D-Glc-Sp2 a-D-glucose 521-BM

03 b-D-Glc-Sp2 b-D-glucose 522-BM

04 a-D-Gal-Sp2 a-D-galactose 523-BM

05 b-D-Gal-Sp2 b-D-galactose 524-BM

06 3-O-Su-Galb-Sp2 b-D-galactose-3-sulfate 534-BM

07 b-GlcNAc-Sp2 b-N-acetyl-D-glucosamine 529-BM

08 a-GalNAc-Sp2 a-N-acetyl-D-galactosamine (T_n) 530-BM

09 b-GalNAc-Sp2 b-N-acetyl-D-galactosamine 531-BM

10 a-D-Man-Sp2 a-D-mannose 525-BM

11 6-H₂PO₃Mana-Sp2 a-D-mannose-6-phosphate 526-BM

12 a-L-Fuc-Sp2 a-L-fucose 527-BM

13 a-Neu5Ac-Sp2 a-N-acetylneuraminic acid 535-BM

14 a-L-Rha-Sp2 a-L-rhamnose 528-BM

15 Glca1-4Glcb-Sp2 maltose 519-BM

16 Galb1-4Glcb-Sp1 lactose S37-1

17 Galb1-3Galb-Sp2 Galb1-3Gal 539-BM

18 Gala1-4GlcNAc-Sp2 Gala1-4GlcNAc 515-BM

19 Galb1-3GlcNAcb-Sp1 Le^c S38-1

20 Galb1-3GalNAcb-Sp2 T_bb 556-BM

21 Galb1-4GlcNAcb-Sp1 LacNAc S36-1

22 GalNAcb1-4GlcNAcb-Sp2 Lac-di-NAc 501-BM

23 Gala1-3(Fuca1-2)Galb-Sp2 B_tri 586-BM

24 Fuca1-2Galb1-3(Fuca1-4)GlcNAcb-Sp2 Le^b 541-BM
25 Galb1-4(Fuca1-3)GlcNAc-Sp1 Le^x 544-BM

26 GalNAcb1-4(Fuca1-3)GlcNAc-Sp1 Fuca1-3-Lac-di-NAc Fuc-501-BM

27 Galb1-3GlcNAcb-Sp2 Le^c 543-BM

28 Fuca1-2Galb1-3GlcNAcb1-3Galb1-4Glcb-Sp5 Lacto-N-fucopentose 1 NGB1502

29 Galb1-3(Fuca1-4)GlcNAc-Sp2 Le^a 02-035

30 Gala1-4Galb1-4Glcb-Sp1 P^k S129-1

31 Gala1-4Galb1-4GlcNAcb-Sp1 P₁ S130-1

32 Galb1-4GlcNAcb1-3Galb1-4Glcb-Sp1 LNnT S109-1

33 GlcNAcb1-3Galb1-4Glcb-Sp1 LNT-2 S110-1

34 Galb1-4GlcNAcb1-3Galb1-4GlcNAcb-Sp1 LN2 S131-1

35 Galb1-4GlcNAcb1-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb-Sp1 LN3 S132-1

36 Neu5Aca2-3Galb1-4Glcb-Sp1 GM3 S71-1

37 Neu5Gca2-3Galb1-4Glcb-Sp1 GM3 (Gc) S94-1

38 Neu5Aca2-3Galb1-4GlcNAcb-Sp1 3’SLN S64-1

39 Neu5Aca2-3Galb1-3GlcNAcb-Sp1 3’-SiaLe^c S73-1

40 Neu5Gca2-3Galb1-4GlcNAcb-Sp1 3’SLN (Gc) S95-1

41 Neu5Aca2-6Galb1-4GlcNAcb-Sp1 6’SLN S70-1
42 Neu5Gca2-6Galb1-4GlcNAcb-Sp1 6’SLN (Gc) S96-1

43 Neu5Aca2-8Neu5Aca2-3Galb1-4Glcb-Sp1 GD3 S136-1

44 KDNa2-3Galb1-4GlcNAcb-Sp1 3’KDNLe^c S91-1

45 KDNa2-3Galb1-3GlcNAcb-Sp1 3’KDNLN S92-1

46 Mana1-3(Mana1-6)Man[a+b]-Sp2 Man₃ NGB1336

47 GalNAca1-T.P1-Sp1 T_n COK1

48 Galb1-3GalNAca1-T.P1-Sp1 Core 1 COK2

49 Galb1-3(GlcNAcb1-6)GalNAca1-T.P1-Sp1 Core 2 COK3

50 Galb1-3(Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 b-galactosylated Core 2 COK4

51 Galb1-3(Galb1-4[Fuca1-3]GlcNAcb1-6)GalNAca1-T.P1-Sp1 Lex on Core 2 COK5

52 Galb1-3(Gala1-3Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 a-galactose on Core 2 COK6

53 Galb1-3(Neu5Aca2-3Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 1 COK12

54 Galb1-3(Neu5Aca2-3Galb1-4[Fuca1-3]GlcNAcb1-6)GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 1 of Core 2 COK13

55 Neu5Aca2-3Galb1-3GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 1 on b-galactosylated Core 2 COK7

56 Neu5Aca2-3Galb1-3(GlcNAcb1-6)GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 1 on a-galactose on Core 2 COK8

57 Neu5Aca2-3Galb1-3(Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 1 with Lex on Core 2 COK9

58 Neu5AcGalb1-3(Gala1-3Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 a1-3Neu5Ac on Core 2 COK10

59 Neu5Aca2-3Galb1-3(Galb1-4[Fuca1-3]GlcNAcb1-6)GalNAca1-T.P1-Sp1 sLex on Core 2 COK11

60 Neu5Aca2-3Galb1-3(Neu5Aca2-3Galb1-4GlcNAcb1-6)GalNAca1-T.P1-Sp1 Disialyl Core 2 COK14

61 Neu5Aca2-3Galb1-3(Neu5Aca2-3Galb1-4[Fuca1-3]GlcNAcb1-6)GalNAca1-T.P1-Sp1 Disialyl Core 2 with sLex on Core 2 COK15

62 6-O-Su-GlcNAcb-Sp2 b-N-acetyl-D-glucosamine-6-sulfate 564-BM

63 6-Su-GalNAca-Sp2 a-N-acetyl-D-galactosamine-6-sulfate 5998-BM

64 Gala1-3Galb-Sp2 B_di 588-BM

65 Galb1-2Galb-Sp2 Galb1-2Gal 576-BM

66 3'-O-Su-Galb1-4Glcb-Sp2 3’-su-LacNAc 567-BM

67 Galb1-4(6-O-Su)GlcNAcb-Sp2 6’-O-su-LacNAc 577-BM

68 Gala1-3GalNAcb-Sp2 T_aa 553-BM

69 Galb1-3GalNAca-Sp2 TF 548-BM

70 3'-O-Su-Galb1-3GlcNAcb-Sp2 3’-su-Le^c 568-BM

71 GlcNAcb1-4GlcNAcb-Sp2 (GlcNAc)₂ 557-BM

72 GlcNAcb1-3GalNAca-Sp2 Core 3 597-BM

73 GalNAca1-3GalNAca-Sp2 Fs-2 551-BM

74 Fuca1-2Galb-Sp2 H_di 591-BM

75 Fuca1-3GlcNAcb-Sp2 Fuca1-3GlcNAc 549-BM

76 Fuca1-4GlcNAcb-Sp2 Fuca1-4GlcNAc, Le 550-BM

77 Gala1-3(Fuca1-2)Galb-Sp7 B_tri-long 586a-BM

78 Galb1-4GlcNAcb1-6GalNAca-Sp2 6-LacNAc-T_n 5996-BM

79 3-O-Su-Galb1-4(Fuca1-3)GlcNAcb-Sp2 3’-O-su-Le^x 566-BM

80 GlcNAcb1-3(GlcNAcb1-6)GalNAca-Sp2 Core 4 599-BM

81 GalNAca1-3(Fuca1-2)Galb-Sp2 A_tri 585-BM

82 GalNAca1-3(Fuca1-2)Galb-Sp7 A_tri-long 585a-BM

83 Neu5Aca2-6Galb1-4Glcb-Sp3 6’-SL 563-BM

84 Neu5Aca2-6(Galb1-3)GalNAca-Sp2 6’-SiaTF 5984-BM

85 Fuca1-2Galb1-3GalNAca-Sp2 H (type 3) 559-BM

86 Fuca1-2Galb1-3GlcNAcb-Sp2 Le^d (H type 1) 542-BM

87 Fuca1-2Galb1-4GlcNAcb-Sp2 H (type 2) 589-BM

88 Fuca1-2Galb1-4(Fuca1-3)GlcNAcb-Sp2 Le^y 545-BM

89 (Galb1-4GlcNAcb)₂-3,6-GalNAca-Sp2 3,6-(lacNAc)₂T_n 5994-BM

90 b-D-Glc-PAA-Sp1 b-D-glucose 122-BP

91 a-D-Gal-PAA-Sp1 a-D-galactose 123-BP

92 b-D-Gal-PAA-Sp1 b-D-galactose 124-BP

93 a-GalNAc-PAA-Sp1 a-N-acetyl-D-galactosamine (T_n) 130-BP

94 b-GalNAc-PAA-Sp1 b-N-acetyl-D-galactosamine 131-BP

95 Galb1-4Glcb-PAA-Sp1 Lac 146-BP

96 Galb1-4GlcNAcb-PAA-Sp1 LacNAc 147-BP

97 Galb1-3GalNAcb-PAA-Sp1 T_bb 156-BP

98 GalNAcb1-4GlcNAc-PAA-Sp1 Lac-di-NAc 101-BP

99 Mana1-3(Mana1-6)Man-PAA-Sp1 Man₃ 132-BP

100 Fuca1-2Gala1-3Galb-PAA-Sp1 B_tri 186-BP

101 GlcNAcb1-3Galb1-4GlcNAcb-Sp1 GlcNAcb1-3’LacNAc B181

102 Galb1-4(Fuca1-3)GlcNAcb1-4Galb1-4(Fuca1-3)GlcNAcb1-4Galb4(Fuca1-3)GlcNAcb-Sp1 Tri-Le^x B182

103 Galb1-3Fuca1-4GlcNAcb-Sp1 Le^a B156

104 Fuca1-2Galb1-4Glcb-Sp1 2’FL B158

105 Fuca1-2Galb1-4GlcNAcb1-3Galb1-4GlcNAc-Sp1 2’F-Di-LN B183

106 Neu5Aca2-3Galb1-4GlcNAcb1-4Galb1-4GlcNAcb-Sp1 3’SiaDi-LN B178

107 Neu5Aca2-3(GalNAcb1-4)Galb1-4Glcb-Sp1 GM2 B177

108 Neu5Aca2-3Galb1-4(Fuca1-3)GlcNAcb-Sp1 sLe^x B157

109 Neu5Aca2-6Galb1-4GlcNAcb1-4Galb1-4GlcNAcb-Sp1 3’SiaDi-LN B179

110 Neu5Aca2-8Neu5Aca1-3(GalNAcb1-4)Galb1-4Glcb-Sp1 GD2 B184

111 Neu5Aca2-8Neu5Aca2-8Neu5Aca2-3Galb1-4Glcb-Sp1 GD3 B108

112 GalNAcb1-4GlcNAcb1-4Mana1-6(GalNAcb1-4GlcNAcb1-4Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Bi-LDN (remodeled from human fibrinogen) COK16

113 Mixed glycans: Man5-9-N-Sp1 Mixture of Man5-Man9 (glycans #114, 129-132) from bovine ribonuclease b COK17

114 Mana1-6(Mana1-3)Mana1-6(Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Man5 (bovine pancreatic ribonuclease b) COK18

115 Blank Blank

116 Blank Blank

117 Blank Blank

118 Blank Blank

119 Blank Blank

120 Blank Blank

121 Blank Blank

122 Negative Control No ligand + FITC-GBP + washes

123 Background Control Phosphate Buffered Saline

124 Positive Control 1 FITC-RCA + Galb1-4Glcb- (16)

125 Positive Control 2 FITC-SNA + Neu5Aca2-6Galb1-4GlcNacb- (41)

126 Positive Control 3 FITC-ConA + Mana1-3(Mana1-6) Man[a + b]- (46)

127 Blank Blank

128 Blank Blank

129 Mana1-6(Mana1-3)Mana1-6(Mana1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Man6 (bovine pancreatic ribonuclease b) COK19

130 Mana1-2Mana1-6(Mana1-3)Mana1-6(Mana1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Man7 (bovine pancreatic ribonuclease b) COK20

131 Mana1-2Mana1-6(Mana1-3)Mana1-6(Mana1-2Mana1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Man8 (bovine pancreatic ribonuclease b) COK21

132 Mana1-2Mana1-2Mana1-3(Mana1-2Mana1-3(Mana1-2Mana1-6)Mana1-6)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 Man9 (bovine pancreatic ribonuclease b) COK22

133 Galb1-4GlcNAcb1-4Mana1-3(Galb1-4GlcNAcb1-4Mana1-6)Mana1-4GlcNAcb1-4GlcNAcb-N-Sp1 As-Fibrinogen (biantennary gal(2)) COK23

134 Gala1-2Galb-Sp2 Gala1-2Gal 555-BM

135 GalNAca1-3Gal-Sp2 A_di 587-BM

136 GlcNAcb1-4GlcNAcb-Sp2 (GlcNAc)₂ 557b-BM

137 GlcNAcb1-6GalNAcaSp2 Core 6 598-BM

138 Gala1-3Galb1-4GlcNAcb-Sp2 Gala1-3’LacNAc 570-BM

139 Galb1-4GlcNAcb1-3GalNAca-Sp2 3-LacNAc-T_n 0995-BM

140 GlcNAcb1-4GlcNAcb1-4GlcNAcb-Sp2 chitotriose 5982-BM

141 GlcNAcb1-6(Galb1-3)GalNAca-Sp2 Core 2 578-BM

142 Fuca1-2Galb1-3GalNAcb-PAA-Sp2 H (type 4) 0080-BP

143 Galb1-4GlcNAcb1-6(Galb1-3)GalNAca-Sp2 6-LacNAc-TF 5980-BM

144 Galb1-4GalNAcb1-4Galb1-4Glcb-Sp2 GA1, asialo-GM1 0970-BM

145 GlcNAcb1-4GlcNAcb1-4GlcNAcb1-4GlcNAcb-Sp3 chitotetraose 5981-BM

146 Mana1-3(Mana1-6)Manb1-4GlcNAcb1-4GlcNAcb-Sp2 Man3-chitobiose 0990-BM

147 Neu5Aca2-3GalNeu5Aca2-3GalNAca-PAA-Sp2 GM4 583-BP

148 Neu5Aca2-3GalNAca-Sp2 3-SiaT_n 0993-BM

149 Neu5Aca2-6Galb-Sp2 Neu5Ac2-6Gal 0084-BM

150 Neu5Aca2-6GalNAca-Sp2 SiaT_n 558-BM

151 Neu5Gca2-6GalNAca-Sp2 a-Neu5Gc-T_n 0983-BM

152 Neu5Aca2-6GalNAca-Sp2 b-SiaT_n 0986-BM

153 Neu5Aca2-3Galb1-3GlcNAc-Sp2 3’-SiaLe^c 554-BM

154 Neu5Aca2-3(Neu5Aca2-6)GalNAca-Sp2 3,6-SiaT_n 0992-BM

155 Neu5Aca2-6(Galb1-3)GalNAca-Sp2 6-SiabTF 0985-BM

156 Neu5Aca2-8Neu5Aca2-8Neu5Aca-Sp6 (Sia)₃ 573-BM

157 Neu5Aca2-3Galb1-3(Neu5Aca2-6)GalNAca-Sp2 Sia2TF 0920-BM

158 3-Su-GalNAcb-Sp2 GalNAc-3-O-sulfate 0952-BM

159 6-HSO3-Galb1-4Glcb-Sp2 6’-O-su-LacNAc 590-BM

160 6'-NeuAca2-3Galb1-4GlcNAcb-Sp2 6’SLN 5997-BM

161 3'-O-Su-Galb1-3GalNAca-Sp2 3’-O-su-TF 592-BM

162 PAA-Sp1 PAA no-BP

163 Mixed glycans-N-Sp1 Mixed biantennary gal(0,1,2) core Fuc - bovine IgG COK24

164 Mixed glycans-N-Sp1 Mixed biantennary gal(1) core Fuc - bovine IgG COK25

165 Mixed glycans-N-Sp1 Mixed biantennary gal(2) core Fuc - bovine IgG COK26

166 Gala1-3GalNAcb-Sp2 T_ab 538-BM

167 Gala1-3Galb1-4(Fuca1-3)GlcNAcb-Sp2 aGalLe^x 509-BM

168 Gala1-3(Fuca1-2)Galb1-4GlcNAcb-Sp2 B (type 2) 507-BM

169 Galb1-3GlcNAcb1-3Galb1-4Glcb-Sp2 LNT 581-BM

170 GlcNAcb1-4GlcNAcb-Sp3 (GlcNAc)₂ 557a-BM

171 GlcNAcb1-2Galb1-3GalNAca-Sp2 GlcNAcb1-2’TF 511-BM

172 GalNAca1-3(Fuca1-2)Galb1-4GlcNAcb-Sp2 A (type 2) 506-BM

173 Neu5Aca1-2-Sp4 a-N-acetylneuraminic acid 535a-BM

174 Neu5Acb1-2-Sp4 b-N-acetylneuraminic acid 516-BM

175 Neu5Gca-Sp2 a-N-glycolylneuraminic acid 518-BM

176 Neu5Gcb-Sp2 b-N-glycolylneuraminic acid 0979-BM

177 Neu5Aca2-3Galb1-4GlcNAcb-Sp2 3’SLN 536-BM

178 Neu5Aca2-3Gala1-3(Fuca1-4)GlcNAcb-Sp2 SiaLe^a 561-BM

179 Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6
(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6)Manb1-4GlcNAcb1-4GlcNAcb-Sp3 A_di 0987-BM

180 3'-O-Su-Galb1-3(Fuca1-4)GlcNAcb-Sp2 3’-O-su-Le^a 565-BM

181 Neu5Aca2-3(6-O-Su)Galb1-4(Fuca1-3)GlcNAcb-Sp2 6^Gal-su-SiaLe^x 517-BM

182 Neu5Aca2-3Galb1-4(Fuca1-3)(6-O-Su)GlcNAcb-Sp2 6^GalNAc-su-SiaLe^x 520-BM

183 b-D-Man-Sp2 b-D-mannose 514-BM

184 9-OS-Sp3 9-OS 0988-BM

185 GalNAcb1-4(Fuca1-2)GlcNAcb1-4Mana1-3(GalNAcb1-4(Fuca1-2)GlcNAcb1-4Mana1-6)Mana1-4GlcNAcb1-4(Fuca1-2)GlcNAcb-N-Sp1 bi-LDF (remodeled human fibrinogen) COK27

186 Mana1-6(Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-2)GlcNAc-N-Sp1 Man-3 chitobiose core Fuc (remodeled bovine IgG) COK28

187 Galb1-4(Fuca1-3)GlcNAcb1-4Mana1-6(Galb1-4(Fuca1-3)GlcNAcb1-4Mana1-6)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 desialylated, fucosylated human apotransferrin COK30

188 Mixed biantennary glycans-N-Sp1 Mixed biantennary structures from WeHi cells COK31

189 Mana1-6(Mana1-3)Mana1-6(GlcNAcb1-4)(GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb-N-Sp1 N-Man5GlcNAc1-4 (structure f/ ovalbumin, peak 5) COK32

190 Mixed glycans-N-Sp1 KLH (Keyhold Limpet Hemocyanin - N-glycans bound to AAA) COK33

191 Galb1-4[6OSO3]Glcb-Sp1 6SuLac B186

192 [3OSO3]Galb1-4(6OSO3)Glcb-Sp1 3’6DiSuLac B187

193 Gala1-3Galb1-4Glcb-Sp1 Galili-tri B195

194 Neu5Aca2-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb-Sp1 3’SiaLN-LN-LN B194

195 Neu5Aca2-3Galb1-4[Fuca1-3]GlcNAcb1-3Galb1-4[Fuca1-3]GlcNAcb1-3Galb1-4[Fuca1-3]GlcNAcb-Sp1 sLe^x-Le^x-Le^x B167

¹ Core H acknowledges the help of Dr. Ronald Schnaar in editing this list of structures.

Code Spacer Arm

Sp1 -O(CH₂)₂NHCO(CH₂)₅NHCO(CH₂)₅NH-Biotin

Sp2 -O(CH₂)₃NH-CO(CH₂)₅NH-Biotin

Sp3 -NHCOCH₂NHCO(CH₂)₅NH-Biotin

Sp4 -O(CH₂)₃NHCO(CH₂)₅NH-CO(CH₂)₅NH-Biotin

Sp5 -NHCO(CH₂)₅NHCO(CH₂)₄NH-Biotin

Sp6 -OCH₂CH₂CH₂NH-Biotin

Sp7 -OCH₂CH₂NH-Biotin

Code Peptide

N Asparagine

P1 EYEYLDYDFLPETEPPEM

T.P1 EYEYLDYDFLPETEPPEM

Human and Murine Lectin Preparation for Analysis

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Last Updated Wednesday, 27-Oct-2004 09:50:37 EDT . Please contact us with comments/questions.

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