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A B C D E F G H I K L M N O P R S T U X Y misc
| ACCNUM | Descriptions of available values for 'columns' and 'keytypes'. |
| ACYRTHOSIPHON_PISUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| AEDES_AEGYPTI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| AgiAnnDbMap | Bimap objects and the Bimap interface |
| AgiAnnDbMap-class | Bimap objects and the Bimap interface |
| ALIAS | Descriptions of available values for 'columns' and 'keytypes'. |
| AnnDbBimap | Bimap objects and the Bimap interface |
| AnnDbBimap-class | Bimap objects and the Bimap interface |
| AnnDbMap | Bimap objects and the Bimap interface |
| AnnDbMap-class | Bimap objects and the Bimap interface |
| AnnDbObj | AnnDbObj objects |
| AnnDbObj-class | AnnDbObj objects |
| AnnDbObj-objects | AnnDbObj objects |
| AnnDbPkg-checker | Check the SQL data contained in an SQLite-based annotation package |
| AnnotationDb | AnnotationDb objects and their progeny, methods etc. |
| AnnotationDb-class | AnnotationDb objects and their progeny, methods etc. |
| ANOPHELES_GAMBIAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| APIS_MELLIFERA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ARABIDOPSIS_THALIANA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ARACYC | Descriptions of available values for 'columns' and 'keytypes'. |
| ARACYCENZYME | Descriptions of available values for 'columns' and 'keytypes'. |
| as.character-method | Formatting a Bimap as a list or character vector |
| as.data.frame-method | Methods for manipulating a Bimap object in a data-frame style |
| as.data.frame.Bimap | Methods for manipulating a Bimap object in a data-frame style |
| as.list | Formatting a Bimap as a list or character vector |
| as.list-method | Formatting a Bimap as a list or character vector |
| as.list.Bimap | Formatting a Bimap as a list or character vector |
| ASPERGILLUS_FUMIGATUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| BATRACHOCHYTRIUM_DENDROBATIDIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| Bimap | Bimap objects and the Bimap interface |
| Bimap-class | Bimap objects and the Bimap interface |
| Bimap-direction | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Bimap-envirAPI | Environment-like API for Bimap objects |
| Bimap-keys | Methods for manipulating the keys of a Bimap object |
| Bimap-toTable | Methods for manipulating a Bimap object in a data-frame style |
| BimapFormatting | Formatting a Bimap as a list or character vector |
| BOMBYX_MORI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| BOS_TAURUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| BRANCHIOSTOMA_FLORIDAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| BRUGIA_MALAYI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAENORHABDITIS_BRENNERI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAENORHABDITIS_BRIGGSAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAENORHABDITIS_ELEGANS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAENORHABDITIS_JAPONICA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAENORHABDITIS_REMANEI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CANDIDA_ALBICANS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CANDIDA_GLABRATA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CANIS_FAMILIARIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAPITELLA_SPI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CAVIA_PORCELLUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| checkMAPCOUNTS | Check the SQL data contained in an SQLite-based annotation package |
| ChipDb-class | AnnotationDb objects and their progeny, methods etc. |
| CHLAMYDOMONAS_REINHARDTII | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CHR | Descriptions of available values for 'columns' and 'keytypes'. |
| CHRLOC | Descriptions of available values for 'columns' and 'keytypes'. |
| CHRLOCEND | Descriptions of available values for 'columns' and 'keytypes'. |
| CIONA_INTESTINALIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CIONA_SAVIGNYI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| class:AgiAnnDbMap | Bimap objects and the Bimap interface |
| class:AnnDbBimap | Bimap objects and the Bimap interface |
| class:AnnDbMap | Bimap objects and the Bimap interface |
| class:AnnDbObj | AnnDbObj objects |
| class:AnnotationDb | AnnotationDb objects and their progeny, methods etc. |
| class:Bimap | Bimap objects and the Bimap interface |
| class:Go3AnnDbBimap | Bimap objects and the Bimap interface |
| class:GOAllFrame | GOFrame and GOAllFrame objects |
| class:GoAnnDbBimap | Bimap objects and the Bimap interface |
| class:GOFrame | GOFrame and GOAllFrame objects |
| class:GOTerms | Class "GOTerms" |
| class:GOTermsAnnDbBimap | Bimap objects and the Bimap interface |
| class:IpiAnnDbMap | Bimap objects and the Bimap interface |
| class:KEGGFrame | KEGGFrame objects |
| class:ProbeAnnDbBimap | Bimap objects and the Bimap interface |
| class:ProbeAnnDbMap | Bimap objects and the Bimap interface |
| class:ProbeGo3AnnDbBimap | Bimap objects and the Bimap interface |
| class:ProbeIpiAnnDbMap | Bimap objects and the Bimap interface |
| COCCIDIOIDES_IMMITIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| colmetanames | Methods for manipulating a Bimap object in a data-frame style |
| colmetanames-method | Methods for manipulating a Bimap object in a data-frame style |
| colnames | Methods for manipulating a Bimap object in a data-frame style |
| colnames-method | Methods for manipulating a Bimap object in a data-frame style |
| cols | AnnotationDb objects and their progeny, methods etc. |
| columns | AnnotationDb objects and their progeny, methods etc. |
| columns-method | AnnotationDb objects and their progeny, methods etc. |
| COMMON | Descriptions of available values for 'columns' and 'keytypes'. |
| contents-method | Environment-like API for Bimap objects |
| COPRINOPSIS_CINEREUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| count.links | Methods for manipulating a Bimap object in a data-frame style |
| count.links-method | Methods for manipulating a Bimap object in a data-frame style |
| count.mappedkeys | Methods for manipulating the keys of a Bimap object |
| count.mappedkeys-method | Methods for manipulating the keys of a Bimap object |
| count.mappedLkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| count.mappedLkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| count.mappedRkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| count.mappedRkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| createSimpleBimap | Creates a simple Bimap from a SQLite database in an situation that is external to AnnotationDbi |
| CRYPTOCOCCUS_NEOFORMANS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CRYPTOSPORIDIUM_HOMINIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CRYPTOSPORIDIUM_PARVUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CULEX_PIPIENS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| CYANIDIOSCHYZON_MEROLAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DANIO_RERIO | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DAPHNIA_PULEX | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| dbconn | AnnDbObj objects |
| dbconn-method | AnnDbObj objects |
| dbconn-method | AnnotationDb objects and their progeny, methods etc. |
| dbfile | AnnDbObj objects |
| dbfile-method | AnnDbObj objects |
| dbfile-method | AnnotationDb objects and their progeny, methods etc. |
| dbInfo | AnnDbObj objects |
| dbInfo-method | AnnDbObj objects |
| dbmeta | AnnDbObj objects |
| dbmeta-method | AnnDbObj objects |
| dbschema | AnnDbObj objects |
| dbschema-method | AnnDbObj objects |
| DEBARYOMYCES_HANSENII | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DEFINITION | Descriptions of available values for 'columns' and 'keytypes' for GO.db. |
| Definition | Class "GOTerms" |
| Definition-method | Class "GOTerms" |
| DESCRIPTION | Descriptions of available values for 'columns' and 'keytypes'. |
| DICTYOSTELIUM_DISCOIDEUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| dim-method | Methods for manipulating a Bimap object in a data-frame style |
| direction | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| direction-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| direction<- | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| direction<--method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| DROSOPHILA_ANANASSAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_GRIMSHAWI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_MELANOGASTER | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_MOJAVENSIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_PSEUDOOBSCURA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_VIRILIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| DROSOPHILA_WILLISTONI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| eapply | Environment-like API for Bimap objects |
| eapply-method | Environment-like API for Bimap objects |
| ENSEMBL | Descriptions of available values for 'columns' and 'keytypes'. |
| ENSEMBLPROT | Descriptions of available values for 'columns' and 'keytypes'. |
| ENSEMBLTRANS | Descriptions of available values for 'columns' and 'keytypes'. |
| ENTAMOEBA_HISTOLYTICA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ENTREZID | Descriptions of available values for 'columns' and 'keytypes'. |
| ENZYME | Descriptions of available values for 'columns' and 'keytypes'. |
| EQUUS_CABALLUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ESCHERICHIA_COLIK12 | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| EVIDENCE | Descriptions of available values for 'columns' and 'keytypes'. |
| EVIDENCEALL | Descriptions of available values for 'columns' and 'keytypes'. |
| exists | Environment-like API for Bimap objects |
| exists-method | Environment-like API for Bimap objects |
| FUSARIUM_GRAMINEARUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| GALLUS_GALLUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| GASTEROSTEUS_ACULEATUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| GENENAME | Descriptions of available values for 'columns' and 'keytypes'. |
| get | Environment-like API for Bimap objects |
| get-method | Environment-like API for Bimap objects |
| getBimapFilters | Methods for getting/setting the filters on a Bimap object |
| getBimapFilters-method | Methods for getting/setting the filters on a Bimap object |
| getGOFrameData | GOFrame and GOAllFrame objects |
| getGOFrameData-method | GOFrame and GOAllFrame objects |
| getKEGGFrameData | KEGGFrame objects |
| getKEGGFrameData-method | KEGGFrame objects |
| GIARDIA_LAMBLIA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| GO | Descriptions of available values for 'columns' and 'keytypes'. |
| Go3AnnDbBimap | Bimap objects and the Bimap interface |
| Go3AnnDbBimap-class | Bimap objects and the Bimap interface |
| GOALL | Descriptions of available values for 'columns' and 'keytypes'. |
| GOAllFrame | GOFrame and GOAllFrame objects |
| GOAllFrame-class | GOFrame and GOAllFrame objects |
| GOAllFrame-method | GOFrame and GOAllFrame objects |
| GoAnnDbBimap | Bimap objects and the Bimap interface |
| GoAnnDbBimap-class | Bimap objects and the Bimap interface |
| GODb-class | AnnotationDb objects and their progeny, methods etc. |
| GOFrame | GOFrame and GOAllFrame objects |
| GOFrame-class | GOFrame and GOAllFrame objects |
| GOFrame-method | GOFrame and GOAllFrame objects |
| GOID | Descriptions of available values for 'columns' and 'keytypes' for GO.db. |
| GOID-method | Class "GOTerms" |
| GOTerms | Class "GOTerms" |
| GOTerms-class | Class "GOTerms" |
| GOTermsAnnDbBimap | Bimap objects and the Bimap interface |
| GOTermsAnnDbBimap-class | Bimap objects and the Bimap interface |
| hasMultiProbes | Methods for getting/setting the filters on a Bimap object |
| hasMultiProbes-method | Methods for getting/setting the filters on a Bimap object |
| hasSingleProbes | Methods for getting/setting the filters on a Bimap object |
| hasSingleProbes-method | Methods for getting/setting the filters on a Bimap object |
| head-method | Methods for manipulating a Bimap object in a data-frame style |
| HELOBDELLA_ROBUSTA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| idConverter | Convenience functions for mapping IDs through an appropriate set of annotation packages |
| initialize-method | Class "GOTerms" |
| InparanoidDb-class | AnnotationDb objects and their progeny, methods etc. |
| inpIDMapper | Convenience functions for mapping IDs through an appropriate set of annotation packages |
| INTERPRO | Descriptions of available values for 'columns' and 'keytypes'. |
| intraIDMapper | Convenience functions for mapping IDs through an appropriate set of annotation packages |
| IPI | Descriptions of available values for 'columns' and 'keytypes'. |
| IpiAnnDbMap | Bimap objects and the Bimap interface |
| IpiAnnDbMap-class | Bimap objects and the Bimap interface |
| isNA | Methods for manipulating the keys of a Bimap object |
| isNA-method | Methods for manipulating the keys of a Bimap object |
| IXODES_SCAPULARIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| KEGGFrame | KEGGFrame objects |
| KEGGFrame-class | KEGGFrame objects |
| KEGGFrame-method | KEGGFrame objects |
| keyname | Methods for manipulating a Bimap object in a data-frame style |
| keyname-method | Methods for manipulating a Bimap object in a data-frame style |
| keys | AnnotationDb objects and their progeny, methods etc. |
| keys-method | AnnotationDb objects and their progeny, methods etc. |
| keys-method | Methods for manipulating the keys of a Bimap object |
| keys<- | Methods for manipulating the keys of a Bimap object |
| keys<--method | Methods for manipulating the keys of a Bimap object |
| keytypes | AnnotationDb objects and their progeny, methods etc. |
| keytypes-method | AnnotationDb objects and their progeny, methods etc. |
| KLUYVEROMYCES_LACTIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| LEISHMANIA_MAJOR | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| length-method | Methods for manipulating the keys of a Bimap object |
| links | Methods for manipulating a Bimap object in a data-frame style |
| links-method | Methods for manipulating a Bimap object in a data-frame style |
| Lkeyname | Methods for manipulating a Bimap object in a data-frame style |
| Lkeyname-method | Methods for manipulating a Bimap object in a data-frame style |
| Lkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Lkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Lkeys<- | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Lkeys<--method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Llength | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Llength-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| loadDb | AnnotationDb objects and their progeny, methods etc. |
| LOTTIA_GIGANTEA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ls | Environment-like API for Bimap objects |
| ls-method | Environment-like API for Bimap objects |
| MACACA_MULATTA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| MAGNAPORTHE_GRISEA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| makeGOGraph | A convenience function to generate graphs based on the GO.db package |
| make_eg_to_go_map | Create GO to Entrez Gene maps for chip-based packages |
| make_go_to_eg_map | Create GO to Entrez Gene maps for chip-based packages |
| MAP | Descriptions of available values for 'columns' and 'keytypes'. |
| mapIds | AnnotationDb objects and their progeny, methods etc. |
| mapIds-method | AnnotationDb objects and their progeny, methods etc. |
| mappedkeys | Methods for manipulating the keys of a Bimap object |
| mappedkeys-method | Methods for manipulating the keys of a Bimap object |
| mappedLkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| mappedLkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| mappedRkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| mappedRkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| metadata-method | AnnotationDb objects and their progeny, methods etc. |
| mget | Environment-like API for Bimap objects |
| mget-method | Environment-like API for Bimap objects |
| MONODELPHIS_DOMESTICA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| MONOSIGA_BREVICOLLIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| MUS_MUSCULUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| names-method | AnnotationDb objects and their progeny, methods etc. |
| NASONIA_VITRIPENNIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ncol | Methods for manipulating a Bimap object in a data-frame style |
| ncol-method | Methods for manipulating a Bimap object in a data-frame style |
| NEMATOSTELLA_VECTENSIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| NEUROSPORA_CRASSA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| nhit | Methods for manipulating a Bimap object in a data-frame style |
| nhit-method | Methods for manipulating a Bimap object in a data-frame style |
| nrow | Methods for manipulating a Bimap object in a data-frame style |
| nrow-method | Methods for manipulating a Bimap object in a data-frame style |
| OMIM | Descriptions of available values for 'columns' and 'keytypes'. |
| ONTOLOGY | Descriptions of available values for 'columns' and 'keytypes' for GO.db. |
| Ontology | Class "GOTerms" |
| Ontology-method | Class "GOTerms" |
| ONTOLOGYALL | Descriptions of available values for 'columns' and 'keytypes'. |
| ORF | Descriptions of available values for 'columns' and 'keytypes'. |
| OrgDb-class | AnnotationDb objects and their progeny, methods etc. |
| orgPackageName | Org package contained in annotation object |
| ORNITHORHYNCHUS_ANATINUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ORYZA_SATIVA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ORYZIAS_LATIPES | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| OSTREOCOCCUS_TAURI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PAN_TROGLODYTES | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PATH | Descriptions of available values for 'columns' and 'keytypes'. |
| PEDICULUS_HUMANUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PFAM | Descriptions of available values for 'columns' and 'keytypes'. |
| PHYSCOMITRELLA_PATENS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PHYTOPHTHORA_RAMORUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PHYTOPHTHORA_SOJAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PLASMODIUM_FALCIPARUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PLASMODIUM_VIVAX | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| PMID | Descriptions of available values for 'columns' and 'keytypes'. |
| PONGO_PYGMAEUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| POPULUS_TRICHOCARPA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| print.probetable | Print method for probetable objects |
| PRISTIONCHUS_PACIFICUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ProbeAnnDbBimap | Bimap objects and the Bimap interface |
| ProbeAnnDbBimap-class | Bimap objects and the Bimap interface |
| ProbeAnnDbMap | Bimap objects and the Bimap interface |
| ProbeAnnDbMap-class | Bimap objects and the Bimap interface |
| ProbeGo3AnnDbBimap | Bimap objects and the Bimap interface |
| ProbeGo3AnnDbBimap-class | Bimap objects and the Bimap interface |
| PROBEID | Descriptions of available values for 'columns' and 'keytypes'. |
| ProbeIpiAnnDbMap | Bimap objects and the Bimap interface |
| ProbeIpiAnnDbMap-class | Bimap objects and the Bimap interface |
| PROSITE | Descriptions of available values for 'columns' and 'keytypes'. |
| PUCCINIA_GRAMINIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| Rattribnames | Methods for manipulating a Bimap object in a data-frame style |
| Rattribnames-method | Methods for manipulating a Bimap object in a data-frame style |
| Rattribnames<- | Methods for manipulating a Bimap object in a data-frame style |
| Rattribnames<--method | Methods for manipulating a Bimap object in a data-frame style |
| RATTUS_NORVEGICUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| ReactomeDb-class | AnnotationDb objects and their progeny, methods etc. |
| REFSEQ | Descriptions of available values for 'columns' and 'keytypes'. |
| revmap | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| revmap-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| RHIZOPUS_ORYZAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| Rkeyname | Methods for manipulating a Bimap object in a data-frame style |
| Rkeyname-method | Methods for manipulating a Bimap object in a data-frame style |
| Rkeys | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Rkeys-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Rkeys<- | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Rkeys<--method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Rlength | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| Rlength-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| SACCHAROMYCES_CEREVISIAE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| sample | Environment-like API for Bimap objects |
| sample-method | Environment-like API for Bimap objects |
| saveDb | AnnotationDb objects and their progeny, methods etc. |
| saveDb-method | AnnotationDb objects and their progeny, methods etc. |
| SCHISTOSOMA_MANSONI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| SCHIZOSACCHAROMYCES_POMBE | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| SCLEROTINIA_SCLEROTIORUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| Secondary | Class "GOTerms" |
| Secondary-method | Class "GOTerms" |
| select | AnnotationDb objects and their progeny, methods etc. |
| select-method | AnnotationDb objects and their progeny, methods etc. |
| setInpBimapFilter | Methods for getting/setting the filters on a Bimap object |
| setInpBimapFilter-method | Methods for getting/setting the filters on a Bimap object |
| SGD | Descriptions of available values for 'columns' and 'keytypes'. |
| show-method | AnnotationDb objects and their progeny, methods etc. |
| show-method | Methods for manipulating the keys of a Bimap object |
| show-method | Bimap objects and the Bimap interface |
| show-method | Class "GOTerms" |
| SMART | Descriptions of available values for 'columns' and 'keytypes'. |
| SORGHUM_BICOLOR | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| species | AnnotationDb objects and their progeny, methods etc. |
| species-method | AnnotationDb objects and their progeny, methods etc. |
| STAGONOSPORA_NODORUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| STRONGYLOCENTROTUS_PURPURATUS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| subset-method | Methods for getting/setting the direction of a Bimap object, and undirected methods for getting/counting/setting its keys |
| summary-method | Bimap objects and the Bimap interface |
| SYMBOL | Descriptions of available values for 'columns' and 'keytypes'. |
| Synonym | Class "GOTerms" |
| Synonym-method | Class "GOTerms" |
| tagname | Methods for manipulating a Bimap object in a data-frame style |
| tagname-method | Methods for manipulating a Bimap object in a data-frame style |
| tail-method | Methods for manipulating a Bimap object in a data-frame style |
| TAIR | Descriptions of available values for 'columns' and 'keytypes'. |
| TAKIFUGU_RUBRIPES | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| taxonomyId | AnnotationDb objects and their progeny, methods etc. |
| taxonomyId-method | AnnotationDb objects and their progeny, methods etc. |
| TERM | Descriptions of available values for 'columns' and 'keytypes' for GO.db. |
| Term | Class "GOTerms" |
| Term-method | Class "GOTerms" |
| TETRAHYMENA_THERMOPHILA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| TETRAODON_NIGROVIRIDIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| THALASSIOSIRA_PSEUDONANA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| THEILERIA_ANNULATA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| THEILERIA_PARVA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| toggleProbes | Methods for getting/setting the filters on a Bimap object |
| toggleProbes-method | Methods for getting/setting the filters on a Bimap object |
| toSQLStringSet | Convert a vector to a quoted string for use as a SQL value list |
| toTable | Methods for manipulating a Bimap object in a data-frame style |
| toTable-method | Methods for manipulating a Bimap object in a data-frame style |
| TRIBOLIUM_CASTANEUM | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| TRICHOMONAS_VAGINALIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| TRICHOPLAX_ADHAERENS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| TRYPANOSOMA_CRUZI | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| UNIGENE | Descriptions of available values for 'columns' and 'keytypes'. |
| UNIPROT | Descriptions of available values for 'columns' and 'keytypes'. |
| unlist2 | A replacement for unlist() that does not mangle the names |
| USTILAGO_MAYDIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| XENOPUS_TROPICALIS | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| YARROWIA_LIPOLYTICA | Descriptions of available values for 'columns' and 'keytypes' for inparanpoid packages. |
| $-method | Environment-like API for Bimap objects |
| [-method | Methods for manipulating the keys of a Bimap object |
| [[-method | Environment-like API for Bimap objects |