<The Matrisome Project: FASTA file access

Uniprot, Refseq, and Ensembl protein FASTA files corresponding to the complete human matrisome. These protein FASTA files are the sequences referenced in the main matrisome tables, subdivided by species (human, mouse) and database (Uniprot, Refseq, Ensembl). They can be used for sequence analysis or proteomic database searches.
Uniprot, Refseq, and Ensembl protein FASTA files corresponding to complete murine matrisome
h u m a nUniprotRefSeqEnsembl
CORE HsUP-Core HsRSP-Core HsENSP-Core
ECM-affiliated HsUP-ECMaffil HsRSP-ECMaffil HsENSP-ECMaffil
Sec. Factors HsUP-SecFact HsRSP-SecFact HsENSP-SecFact
Regulators HsUP-Regul HsRSP-Regul HsENSP-Regul
 These protein FASTA files are the sequences referenced in the main matrisome tables, subdivided into species (human, mouse), database (Uniprot, Refseq, Ensembl), and the categories 'CORE' ("core matrisome") and the matrisome-associated categories 'ECM-affiliated', 'Secreted factors', and 'Regulators'. They can be used for sequence analysis or proteomic database searches.
m o u s eUniprotRefSeqEnsembl
CORE MmUP-Core MmRSP-Core MmENSP-Core
ECM-affiliated MmUP-ECMaffil MmRSP-ECMaffil MmENSP-ECMaffil
Sec. Factors MmUP-SecFact MmRSP-SecFact MmENSP-SecFact
Regulators MmUP-Regul MmRSP-Regul MmENSP-Regul