MIT siRNA Website

return to gene table

DDR2
(Discoidin domain receptor tyrosine kinase 2)


Target gene:
DDR2 (NM_006182 )
Probe type:
shRNA
Sequence:
TGCTGTTGACAGTGAGCG
CGCCTATCTTGAGTTCTGCAAA
TAGTGAAGCCACAGATGTA
TTTGCAGAACTCAAGATAGGCA
TGCCTACTGCCTCGGA
NCBI Database ID#:
Not available
Target sequence:
CCTATCTTGAGTTCTGCAA
 
Comments:  
This sequence is part of the shRNA Validation Project.
This shRNA is available for purchase from Open Biosystems
(Oligo ID =V2LHS_63700)
 

Publications

 
This dataset is unpublished. Further information on the validation experiments can be found at the shRNA Validation Project website.

Validation Experiments

 
Organism:
Human
Experiment subject:
Cell culture
Cell type:
Ovarian cancer / Breast cancer
Cell line:
OVCAR-8 / MCF-7
Gene of origin:
Endogenous
Treatment prior to RNAi:
N/A
Vector:
pGIPZ lentiviral expression vector
Delivery method:
Viral infection

mRNA suppression (%):
85% in OVCAR-8 cells
78% in MCF-7 cells

Method of mRNA detection:
Quantitive real-time PCR
Protein suppression (%):
Not tested
Method of protein suppression:
N/A
Phenotype observed:
Notes:
For further information on this and other shRNA Validation Project entries, visit http://cgap.nci.nih.gov/RNAi/ICBP.

Submitters Information

 
Submitted by:
Mary Lindstrom, based on information provided by the shRNA Validation Project.
Location
NCI
   
 


Last updated January 9th, 2009