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H2AFZ
(H2A histone family, member Z)
Target gene:
H2AFZ (NM_002106)		 Probe type:
shRNA
Sequence:
TGCTGTTGACAGTGAGCG
AGCCGTATTCATCGACACCTAA
TAGTGAAGCCACAGATGTA
TTAGGTGTCGATGAATACGGCC
TGCCTACTGCCTCGGA		 NCBI Database ID#:
Not available
Target sequence:
CCGTATTCATCGACACCTA		  
Comments:  
This sequence is part of the shRNA Validation Project.
This shRNA is available for purchase from Open Biosystems
(Oligo ID =V2LHS_132985)
 

Publications

  
This dataset is unpublished. Further information on the validation experiments can be found at the shRNA Validation Project website.

Validation Experiments

  
Organism:
Human		 Experiment subject:
Cell culture
Cell type:
Ovarian cancer / Breast cancer		 Cell line:
OVCAR-8 / MCF-7
Gene of origin:
Endogenous		 Treatment prior to RNAi:
N/A
Vector:
pGIPZ lentiviral expression vector 		Delivery method:
Viral infection

mRNA suppression (%):
98% in OVCAR-8 cells
87% in MCF-7 cells

 Method of mRNA detection:
Quantitive real-time PCR
Protein suppression (%):
Not tested		 Method of protein suppression:
N/A
Phenotype observed:
Notes:
For further information on this and other shRNA Validation Project entries, visit http://cgap.nci.nih.gov/RNAi/ICBP.

Submitters Information

  
Submitted by:
Mary Lindstrom, based on information provided by the shRNA Validation Project. 		Location
NCI
   
 

Last updated January 9th, 2009