2012

Chen, Y.-J., Clancy, K., & C.A. Voigt
"Biophysical Models to Predict the Function of Genetic Parts."
in Quantitative Biology From Molecular to Cellular Systems, ed. Michael E. Wall, Taylor & Francis, 2012.

Lou, C., Stanton, B.C., Chen, Y.-J., Munsky, B., & C.A. Voigt
Ribozyme-based insulator parts buffer synthetic circuits from genetic context.
Nature Biotechnology, 30: 1137-1142, 2012.

Moon, T.S., Lou, C., Tamsir, A., Stanton, B.C., & C.A. Voigt
Genetic programs constructed from layered logic gates in single cells.
Nature, 491: 249-253, 2012.

Moser, F., Broers, N., Hartmans, S., Tamsir, A., Kerkman, R., Roubos, J.A., Bovenberg, R., & C.A. Voigt
Genetic Circuit Performance under Conditions Relevant for Industrial Bioreactors.
ACS Synth. Biol., 1(11): 555-564, 2012.

Temme, K., Hill, R., Segall-Shapiro, T.H., Moser, F., & C.A. Voigt
Modular control of multiple pathways using engineered orthogonal T7 polymerases
Nucleic Acids Research, 40(17): 8773-8781, 2012.

Temme, K., Zhao, D., & C.A. Voigt
Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca.
Proc. Natl. Acad. Sci., 109(18): 7085-7090, 2012.

2011

Clarke E.J. & C.A. Voigt
Characterization of combinatorial patterns generated by multiple two-component sensors in E. coli that respond to many stimuli.
Biotechnology & Bioengineering, 108(3): 666-675.

Moon, T.S., Clarke E.J., Groban, E.S., Tamsir, A., Clark, R.M., Eames, M., Kortemme, T., & C.A.Voigt
Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli.
J. Molec. Biol., 406(2): 245-227, 2011.

Tabor J.J., Levskaya A. & C.A. Voigt
Multichromatic control of gene expression in Escherichia coli.
Journal of Molecular Biology, 405(2): 315-324, 2011.

Tamsir A., Tabor J.J. & C.A. Voigt
Robust multicellular computing using genetically encoded NOR gates and chemical 'wires.'
Nature, 469(7329): 212-215, 2011.

Toettcher, J.E., Voigt, C.A., Weiner, O.D. & W.A. Lim
The promise of optogenetics in cell biology: interrogating molecular circuits in space and time.
Nature Methods, 8(1): 35-38, 2011.

2010

Clancy, K., & C.A. Voigt.
Programming cells: towards an automated 'Genetic Compiler'.
Curr. Opin. Biotechnol. 21(4):572-81, 2010.

Fischbach, M., & C.A. Voigt.
Prokaryotic gene clusters: a rich toolbox for synthetic biology.
Biotechnol J., 5(12):1277-96, 2010.

Widmaier D. & C.A. Voigt.
Quantification of the physiochemical constraints on the export of spider silk proteins by Salmonella type III secretion.
Microbial Cell Factories, 9: 78, 2010.

2009

Bayer, T.S., Widmaier, D.M., Temme, K., Mirsky, E.A., Santi, D.V., & C.A. Voigt.
Microbial conversion of biomass to methyl halides.
JACS, 131 (18): 6508-6515, 2009.

Groban, E.S., Clarke, E.J., Salis, H., Miller, S.M., & C.A. Voigt.
Kinetic buffering of crosstalk between bacterial two-component sensors.
Journal of Molecular Biology, 390 (3): 380-393, 2009.

Levskaya, A., Weiner, O.D., Lim, W.A., & C.A. Voigt.
Spatiotemporal control of cell signalling using a light-switchable protein interaction.
Nature, 461(7266):997-1001, 2009.

Salis, H., Tamsir, A. & C.A. Voigt.
Engineering Bacterial Signals and Sensors.
Collin M, Schuch R (eds): Bacterial Sensing and Signaling. Contrib Microbiol. Basel, Karger, 16: 194-225, 2009.

Salis, H., Mirsky, E. & C.A. Voigt.
Automated design of synthetic ribosome binding sites to control protein expression.
Nature Biotechnology, 27(10):946-50, 2009.

Tabor, J.J., Salis, H., Simpson, Z.B., Chevalier, A.A., Levskaya, A., Marcotte, E., Voigt, C.A., & Ellington, A.D.
A Synthetic Genetic Edge Detection Program.
Cell, 137 (7): 1271-1281, 2009.

Widmaier, D., Tullman-Ercek, D., Mirsky, E., Hill, R., Govindarajan, S., Minshull, J., & C.A.Voigt.
Engineering the Salmonella type III secretion system to export spider silk monomers.
Molecular Systems Biology, 5: 309, 2009.

2008

Temme, K., Salis, H., Tullman-Erck, D. Levskaya, A., Hong, S-H., & C.A.Voigt.
Induction and relaxation dynamics of the regulatory network controlling the type III secretion system encoded within Salmonella pathogenicity island.
Journal of Molecular Biology, 377 (1): 47-61, 2008.

Voigt, C.A.
Life from information.
Nature Methods, 5(1):27-8, 2008.

2007

Anderson, JC, Voigt, CA, & Arkin, AP. (2007)
Environmental signal integration by a modular AND gate.
Molecular Systems Biology, 3: 133, 2007.

2006

Anderson, J. C., Clarke, E. J., Arkin, A. P., & Voigt, C. A. (2006)
Environmentally Controlled Invasion of Cancer Cells by Engineered Bacteria.
Journal of Molecular Biology, 355(4): 619-627, 2006.

Voigt CA.
Genetic parts to program bacteria.
Curr Opin Biotechnol. 2006 Oct;17(5):548-57.

2005

Levskaya, A., Chevalier, A. A., Tabor, J. J., Simpson, Z. B., Lavery, L. A., Levy, M., Davidson, E. A., Scouras, A., Ellington, A. D., Marcotte, E. M., & Voigt, C. A.
Synthetic biology: Engineering Escherichia coli to see light.
Nature, 438: 441-442, 2005.

Voigt, C. A., and Keasling, J. D.
Programming Cellular Function. (meeting review)
Nature Chemical Biology, 1: 304-307, 2005.

Voigt C. A., Wolf D. M., & Arkin A. P.
The Bacillus subtilis sin operon: An evolvable network motif.
Genetics, 169 (3): 1187-1202, 2005.

2004

Otey C. R., Silberg J. J., Voigt C. A., Endelman J. B., Bandara G., & Arnold F. H.
Functional evolution and structural conservation in chimeric cytochromes P450: Calibrating a structure-guided approach.
Chemistry & Biology, 11 (3): 309-318.

2003

Meyer, M. M., Silberg, J. J., Voigt, C. A., Endelman, J. B., Mayo, S. L., Wang, Z-G., & Arnold, F. H.
Library analysis of SCHEMA-guided protein recombination.
Protein Science, 12: 1686-1693.

2002

Bolon, D. N., Voigt, C. A., & Mayo, S. L.
De novo design of biocatalysts.
Curr. Opin. Chem. Biol., 6: 125-129.

Voigt, C. A., Martinez, C., Mayo, S.L., Wang, Z-.G., & Arnold, F.H. (2002)
Protein building blocks preserved by recombination.
Nature Structural Biology, 9: 553-558.

Voigt, C. A.
Computationally optimizing the directed evolution of proteins.
Thesis, California Institute of Technology.

2001

Voigt, C. A., Mayo, S.L., Arnold, F.H., & Wang, Z-.G.
Computational method to reduce the search space of directed protein evolution.
Proc. Natl. Acad. Sci. USA, 98: 3778-3783.

Voigt, C. A., Mayo, S.L., Arnold, F.H., & Wang, Z-.G.
Computationally focusing the directed evolution of proteins.
J. Cellular Biochem., Supp 37: 58-63.

2000

Voigt, C. A., Gorden, D. B., & Mayo, S. L.
Trading accuracy for speed: a quantitative comparison of search algorithms in protein sequence design.
Journal of Molecular Biology, 299: 789-803.

1997

Voigt, C. A., & Ziff, R. M.
Epidemic analysis of the oxygen poisoning critical point in the Ziff- Gulari-Barshad model.
Physical Review E, 56: R6241-R6244.

Voigt, C. A., & Ziff, R. M.
Dynamic behavior of the monomer-monomer surface reaction model with adsorbate interactions.
Journal of Chemical Physics, 107: 7397-7401.