HST 583 Fall 2006 Calendar
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| Excel Document of Calendar | |||
Date
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Lecture Monday 3:00-4:00 and Wednesday 3:00-4:00 PM Room E25-119 (except as noted) |
Lab Monday 1:00-2:30 PM Room 1-115 (except as noted) |
Discussion Wednesday 2:00-3:00 PM Room E25-119 |
| Overview | |||
| 9/6 Wed |
Introduction to course. Randy Gollub Introduction to Functional Magnetic Resonance Imaging. Bruce Rosen | ||
| Functional Neural Systems | |||
| 9/11 Mon |
Lab switch 1: fMRI Acqusition Lab II. Sue Gabrieli, Christina Triantafyllou McGovern Imaging Center, 46-1164 Directions Hand out PS # 1. Solutions |
MRI Safety Training (1-1:30pm) BCS Seminar Room, 46-4062 Randy Gollub 1: fMRI Acquisition Lab I (1:30-3pm), McGovern Imaging Center, 46-1164 Sue Gabrieli, Christina Triantafyllou Directions |
|
| 9/13 Wed |
Neural Systems II.
Brad Dickerson Fxnl Neuroanatomy Slides II |
Lecture switch Neural Systems I. Brad Dickerson Fxnl Neuroanatomy Slides I | |
| 9/18 Mon |
Neural Systems III.
Brad Dickerson Fxnl Neuroanatomy Slides III |
2: Intro to fMRI Data and Analysis
Div Bolar Rm 26-139 Div's Lab 2 Presentation Lab 2 Exercises (to be handed in) LAB 2 SOLUTIONS | |
| Imaging Physiology | |||
| 9/20 Wed |
Overview of Imaging Physiology.
Respiratory and cardiovascular physiology impact on fMRI Robert Banzett PS #1 due. PS# 2 CANCELLED |
Human Subject Safety Issues Handout Randy Gollub |
|
| 9/25 Mon |
No class. |
||
| 9/27 Wed |
Cerebrovascular anatomy and neural regulation of CNS blood flow. Brad Dickerson Lecture Slides |
Concurrent learning and imaging John Gabrieli |
|
| 10/2 Mon |
Neurovascular coupling. Global vs. regionally specific changes
in CBF and metabolism. B. Dickerson Lecture Slides |
3: Improving fMRI signal detection using
physiological data.
Jennifer Melcher Lab #2 Due |
|
| Physics of Image Acquisition | |||
| 10/4 Wed |
MRI Physics I Karl Helmer Lecture Slides |
Parallel Imaging Dan Sodickson |
|
| 10/9 Mon |
No class (Columbus Day) |
||
| 10/11 Wed |
MRI Physics III. Larry Wald Lecture Slides Physics II and III Hand out PS #3 |
Lecture switch MRI Physics II. Larry Wald Lecture Slides Physics II and III |
|
| 10/16 Mon |
Physics of diffusion weighted imaging. Karl Helmar Lecture Slides: Diffusion Imaging |
4: The Life Cycle of Medical Imaging Data Sonia Pujol |
|
| 10/18 Wed |
Clinical applications of perfusion weighted imaging Greg Sorensen Lecture Slides: Perfusion Lab #3 Due |
Understanding the issues in the controversial papers on face perception in autism Nouchine Hadjikhani |
|
| 10/23 Mon |
Lab switch 5: MRI Physics Lab II. McGovern Imaging Center, 46-1164 Christina Triantafyllou, Larry Wald |
5: MR Physics Lab I. McGovern Imaging Center, 46-1164 Christina Triantafyllou, Larry Wald Lab 5 Download |
|
| 10/25 Wed |
Quantitative fMRI: CBV, CBF, & ASL Joe Mandeville Handout | |
Modeling the BOLD signal: CBV and CBF methods and applications Joe Mandeville |
| General Principles of Experimental Design | |||
| 10/30 Mon |
General Principles of Experimental Design I Robert Savoy Lab #4 Due |
6: Diffusion weighted imaging workshop Sonia Pujol |
|
| 11/1 Wed |
General Principles of Experimental Design II Robert Savoy | |
Functional neuroimaging investigations of memory Randy Buckner |
| 11/6 Mon |
Psychological State Variables in Imaging. John Gabrieli PS #3 Due. |
Matrix Alegra for fMRI Data Primer Doug Greve | |
| 11/8 Wed |
Mid-term Exam Mid-term Exam Answer Key |
||
| Statistical Analysis | |||
| 11/13 Mon |
Overview of fMRI statistical Analysis. Stats I. Doug Greve Doug's Intro slides Doug's Text outline Handout PS #4. Pset 4 Answers |
7: Statistical Analysis of fMRI Data I Rm 26-139 Anastasia Yendiki | |
| 11/15 Wed |
Stats II. Doug Greve Lab 5 Due |
Reconciling discrepant fMRI findings Dara Manoach |
|
| 11/20 Mon |
Stats III. Doug Greve |
7: Statistical Analysis of fMRI Data II Rm 26-139 Anastasia Yendiki Lab 6 Due Lab 7i Due |
|
| 11/22 Wed |
Beyond the GLM; exploring connectivity in fMRI data. Mark Vangel & Doug Greve | .
Linking blood flow to neural activity Christopher Moore Rescheduled to 12/4 |
|
| 11/27 Mon |
Stats IV. Doug Greve |
7: Statistical Analysis of fMRI Data III. Rm 26-139 Anastasia Yendiki |
|
| 11/29 Wed |
Stats V. Mark Vangel Mark's Lecture Slides |
Switched to lab: 2 pm START 7: Statistical Analysis of fMRI Data IV. b Rm 26-139 Anastasia Yendiki |
|
| Structural and functional analysis. | |||
| 12/4 Mon |
Spatial normalization for anatomical analysis David Kennedy Lecture Slides Lab 7ii Due Lab 7iii Due |
Switched to discussion NOTE 1pm START! 1 pm - 2 pm Linking blood flow to neural activity Chris Moore 2 pm - 3 pm fMRI evaluation of single subject neural plasticity in somatosensory cortical representation Vitaly Napadow Rm E25-119 |
|
| 12/6 Wed |
Stats VI. Mark Vangel PS #4 due. Lab 7iv DUE ON FRIDAY 12/8 PLEASE PUT UNDER DOOR OF 26-331 | Functional imaging investigation of visual processing Nancy Kanwisher |
|
| 12/11 Mon |
Surface-based anatomical analysis. David Salat David's lecture slides |
Extra lab time for Final preparation MEET IN 1-115 @ 1 pm |
|
| 12/13 Wed |
Future Directions in fMRI Randy Gollub | Extra TA Office Hours Div Bolar |
|
| 12/18 Mon |
Final Exam (2:00 PM-4:00 PM) E25-119 | ||